Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11b14
         (800 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    28   0.12 
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    25   0.62 
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          24   1.4  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      24   1.4  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          24   1.4  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        23   2.5  
AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.              23   2.5  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   3.3  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   7.6  

>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 27.9 bits (59), Expect = 0.12
 Identities = 12/32 (37%), Positives = 23/32 (71%)
 Frame = +2

Query: 263 LKSLDEKHRKYKVMEYTLATKRRRLRQQIPDL 358
           +KSL+E+ RK+ V +  L+ ++R LR+++  L
Sbjct: 97  IKSLEERERKHAVHKEQLSREQRFLRRRLEQL 128


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 25.4 bits (53), Expect = 0.62
 Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
 Frame = +2

Query: 332 RLRQQIPDLARTIEVIEKLKEQKEEVETQFLLSD--QVFVKANVPPTKSVCLWLGANVML 505
           RLR+ I  LAR ++ IE  K     VE++    +  Q  V   V  T+   L L  N+  
Sbjct: 93  RLREGIGSLARILKTIENFKGTVTHVESRPSKKEGLQFDVLVKVDMTRQYLLQLIRNLRQ 152

Query: 506 EYSLEDAEKLLTTN 547
             +L D   LL  N
Sbjct: 153 SSAL-DGVTLLADN 165


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = -2

Query: 532 FFSIFKTILQHY 497
           FFSI+KTIL +Y
Sbjct: 417 FFSIYKTILDYY 428


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = -2

Query: 532 FFSIFKTILQHY 497
           FFSI+KTIL +Y
Sbjct: 417 FFSIYKTILDYY 428


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = -2

Query: 532 FFSIFKTILQHY 497
           FFSI+KTIL +Y
Sbjct: 43  FFSIYKTILDYY 54


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 29/116 (25%), Positives = 48/116 (41%), Gaps = 5/116 (4%)
 Frame = -3

Query: 522 SSRLYSNITLAPSHKH--TDFVGGTLAFTNT*SLRRNCVSTSSFCSFNFSITSIVRAKSG 349
           +S +Y  ++ A +H H          AF  T S+     ST++  +   +  ++  A +G
Sbjct: 85  TSSMYPYVSAAAAHHHHQQQQAVAAAAFGATSSMVPGFGSTAASSAALAAAAAVDAATAG 144

Query: 348 I-CCRNRLLLVANVY--SITLYLRCFSSRLFKTTSTPSALIGDFINSSTLSTNSAS 190
              CR    L  NV   S    +        +  +TPS+L+     SS +S  SAS
Sbjct: 145 DKSCRYTASLAGNVAPASADPMVNYTLGHHHQNGATPSSLVSSASASSAVSAASAS 200


>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = +2

Query: 443 VKANVPPTKSVCLWLGANVMLEYS 514
           +K   PP K   +W+G +++   S
Sbjct: 102 IKIIAPPEKKYSVWIGGSILASLS 125


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -1

Query: 206 LQIQLLVFQNTT*GSRVLLRLLPFLFIVK 120
           L++QL++ + +T   R+LL +LP    VK
Sbjct: 220 LEVQLVIEEQSTEQERLLLSVLPEHVAVK 248


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 12/48 (25%), Positives = 20/48 (41%)
 Frame = +2

Query: 509 YSLEDAEKLLTTNMETAQENLNQVEHDLDFLRDQCTTTEVNMARVYNW 652
           + L   E +LT      Q N   +  +LD + D+    +  M  + NW
Sbjct: 269 FELVTVEPILTERPSDRQRNEILLSDELDSVDDRTLRLKGQMIYMDNW 316


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,973
Number of Sequences: 438
Number of extensions: 3831
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25367793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)