Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11b13
         (389 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8ITJ9 Cluster: Transposase; n=7; Arthropoda|Rep: Trans...    42   0.006
UniRef50_Q9TXP4 Cluster: Putative uncharacterized protein; n=1; ...    41   0.010
UniRef50_Q61X57 Cluster: Putative uncharacterized protein CBG041...    33   2.6  
UniRef50_O81454 Cluster: T27D20.2 protein; n=17; Magnoliophyta|R...    31   7.9  

>UniRef50_Q8ITJ9 Cluster: Transposase; n=7; Arthropoda|Rep:
           Transposase - Bombyx mori (Silk moth)
          Length = 346

 Score = 41.5 bits (93), Expect = 0.006
 Identities = 16/26 (61%), Positives = 21/26 (80%)
 Frame = -2

Query: 127 NPLDFKLWSVLEDMACSKRHGDIESL 50
           NPLD+K+W  LE+ ACSK H ++ESL
Sbjct: 282 NPLDYKIWQHLEEKACSKPHPNLESL 307


>UniRef50_Q9TXP4 Cluster: Putative uncharacterized protein; n=1;
           Caenorhabditis elegans|Rep: Putative uncharacterized
           protein - Caenorhabditis elegans
          Length = 459

 Score = 40.7 bits (91), Expect = 0.010
 Identities = 16/26 (61%), Positives = 21/26 (80%)
 Frame = -2

Query: 127 NPLDFKLWSVLEDMACSKRHGDIESL 50
           NP+D+ +WSVLE  ACSK H +I+SL
Sbjct: 345 NPMDYSVWSVLEAKACSKPHRNIDSL 370


>UniRef50_Q61X57 Cluster: Putative uncharacterized protein CBG04119;
           n=1; Caenorhabditis briggsae|Rep: Putative
           uncharacterized protein CBG04119 - Caenorhabditis
           briggsae
          Length = 312

 Score = 32.7 bits (71), Expect = 2.6
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -2

Query: 127 NPLDFKLWSVLEDMACSKRHGDIESL 50
           NPLDF +W  LE+   ++ H +++SL
Sbjct: 245 NPLDFSVWGYLEEKVMARSHPNVDSL 270


>UniRef50_O81454 Cluster: T27D20.2 protein; n=17; Magnoliophyta|Rep:
           T27D20.2 protein - Arabidopsis thaliana (Mouse-ear
           cress)
          Length = 315

 Score = 31.1 bits (67), Expect = 7.9
 Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
 Frame = +3

Query: 3   LFPRKISPLLPP--KIF*RDSMSPCRLEQAMSSKTD 104
           LFP +I P LPP  K + R+S+SPC +   +  K D
Sbjct: 113 LFPEEIPPGLPPIHKGYIRESLSPCAVPVLLVPKKD 148


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 355,044,518
Number of Sequences: 1657284
Number of extensions: 5939964
Number of successful extensions: 10542
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10542
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 16143318346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)