Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11b12
(652 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33276| Best HMM Match : Glyco_transf_43 (HMM E-Value=0) 166 1e-41
SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0) 41 0.001
SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29) 41 0.001
SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0) 41 0.001
SB_36848| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.47
SB_15810| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_8941| Best HMM Match : VWA (HMM E-Value=0) 29 4.3
SB_4896| Best HMM Match : TFIID_20kDa (HMM E-Value=2.3e-05) 28 5.7
>SB_33276| Best HMM Match : Glyco_transf_43 (HMM E-Value=0)
Length = 1182
Score = 166 bits (404), Expect = 1e-41
Identities = 82/166 (49%), Positives = 108/166 (65%), Gaps = 3/166 (1%)
Frame = +1
Query: 163 LKIAIENATGVRPDRQKLLNVKFEGKVATDNCTLADLNLKPNLKIMMMGSLEEA---IVG 333
++++ N+ G P K+++VK+ GK TD+ L+ LNLK KIMMMG+ EE ++
Sbjct: 741 IRVSARNSMGYGPP-SKVVSVKYTGKTPTDDIKLSSLNLKQGAKIMMMGTREEKLADVIA 799
Query: 334 ARTKPXXXXXXXXXXXXXXXXXXXXXXXYIAKINKRIRDYKINVLNEPRPGKKLLVLDID 513
+ + KI++R+ DYK+N+LN+P KKLLVLDID
Sbjct: 800 PSDELLNIQVVNDFDIEEDEIMVENRDENLEKISRRVADYKVNILNDPEDNKKLLVLDID 859
Query: 514 YTLFDHRSVAETGYELMRPFLHVFLTSAYEDYDIVIWSATGMKWIE 651
YTLFDHRSVAETG+ELMRP+LH FLTSAYEDY+IVIWSAT MKWI+
Sbjct: 860 YTLFDHRSVAETGFELMRPYLHEFLTSAYEDYNIVIWSATSMKWID 905
>SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/50 (38%), Positives = 32/50 (64%)
Frame = +1
Query: 133 ELSPSDSVAMLKIAIENATGVRPDRQKLLNVKFEGKVATDNCTLADLNLK 282
E+ PSD++ +K I++ G+ PD+Q+L+ F GK D TL+D N++
Sbjct: 16 EVEPSDTIENVKAKIQDKEGIPPDQQRLI---FAGKQLEDGRTLSDYNIQ 62
>SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/50 (38%), Positives = 32/50 (64%)
Frame = +1
Query: 133 ELSPSDSVAMLKIAIENATGVRPDRQKLLNVKFEGKVATDNCTLADLNLK 282
E+ PSD++ +K I++ G+ PD+Q+L+ F GK D TL+D N++
Sbjct: 16 EVEPSDTIENVKAKIQDKEGIPPDQQRLI---FAGKQLEDGRTLSDYNIQ 62
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/50 (38%), Positives = 32/50 (64%)
Frame = +1
Query: 133 ELSPSDSVAMLKIAIENATGVRPDRQKLLNVKFEGKVATDNCTLADLNLK 282
E+ PSD++ +K I++ G+ PD+Q+L+ F GK D TL+D N++
Sbjct: 92 EVEPSDTIENVKAKIQDKEGIPPDQQRLI---FAGKQLEDGRTLSDYNIQ 138
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/50 (38%), Positives = 32/50 (64%)
Frame = +1
Query: 133 ELSPSDSVAMLKIAIENATGVRPDRQKLLNVKFEGKVATDNCTLADLNLK 282
E+ PSD++ +K I++ G+ PD+Q+L+ F GK D TL+D N++
Sbjct: 168 EVEPSDTIENVKAKIQDKEGIPPDQQRLI---FAGKQLEDGRTLSDYNIQ 214
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/50 (38%), Positives = 32/50 (64%)
Frame = +1
Query: 133 ELSPSDSVAMLKIAIENATGVRPDRQKLLNVKFEGKVATDNCTLADLNLK 282
E+ PSD++ +K I++ G+ PD+Q+L+ F GK D TL+D N++
Sbjct: 244 EVEPSDTIENVKAKIQDKEGIPPDQQRLI---FAGKQLEDGRTLSDYNIQ 290
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/50 (38%), Positives = 32/50 (64%)
Frame = +1
Query: 133 ELSPSDSVAMLKIAIENATGVRPDRQKLLNVKFEGKVATDNCTLADLNLK 282
E+ PSD++ +K I++ G+ PD+Q+L+ F GK D TL+D N++
Sbjct: 320 EVEPSDTIENVKAKIQDKEGIPPDQQRLI---FAGKQLEDGRTLSDYNIQ 366
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/50 (38%), Positives = 32/50 (64%)
Frame = +1
Query: 133 ELSPSDSVAMLKIAIENATGVRPDRQKLLNVKFEGKVATDNCTLADLNLK 282
E+ PSD++ +K I++ G+ PD+Q+L+ F GK D TL+D N++
Sbjct: 396 EVEPSDTIENVKAKIQDKEGIPPDQQRLI---FAGKQLEDGRTLSDYNIQ 442
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/50 (38%), Positives = 32/50 (64%)
Frame = +1
Query: 133 ELSPSDSVAMLKIAIENATGVRPDRQKLLNVKFEGKVATDNCTLADLNLK 282
E+ PSD++ +K I++ G+ PD+Q+L+ F GK D TL+D N++
Sbjct: 472 EVEPSDTIENVKAKIQDKEGIPPDQQRLI---FAGKQLEDGRTLSDYNIQ 518
>SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 381
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/50 (38%), Positives = 32/50 (64%)
Frame = +1
Query: 133 ELSPSDSVAMLKIAIENATGVRPDRQKLLNVKFEGKVATDNCTLADLNLK 282
E+ PSD++ +K I++ G+ PD+Q+L+ F GK D TL+D N++
Sbjct: 16 EVEPSDTIENVKAKIQDKEGIPPDQQRLI---FAGKQLEDGRTLSDYNIQ 62
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/50 (38%), Positives = 32/50 (64%)
Frame = +1
Query: 133 ELSPSDSVAMLKIAIENATGVRPDRQKLLNVKFEGKVATDNCTLADLNLK 282
E+ PSD++ +K I++ G+ PD+Q+L+ F GK D TL+D N++
Sbjct: 92 EVEPSDTIENVKAKIQDKEGIPPDQQRLI---FAGKQLEDGRTLSDYNIQ 138
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/50 (38%), Positives = 32/50 (64%)
Frame = +1
Query: 133 ELSPSDSVAMLKIAIENATGVRPDRQKLLNVKFEGKVATDNCTLADLNLK 282
E+ PSD++ +K I++ G+ PD+Q+L+ F GK D TL+D N++
Sbjct: 168 EVEPSDTIENVKAKIQDKEGIPPDQQRLI---FAGKQLEDGRTLSDYNIQ 214
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/50 (38%), Positives = 32/50 (64%)
Frame = +1
Query: 133 ELSPSDSVAMLKIAIENATGVRPDRQKLLNVKFEGKVATDNCTLADLNLK 282
E+ PSD++ +K I++ G+ PD+Q+L+ F GK D TL+D N++
Sbjct: 244 EVEPSDTIENVKAKIQDKEGIPPDQQRLI---FAGKQLEDGRTLSDYNIQ 290
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/50 (38%), Positives = 32/50 (64%)
Frame = +1
Query: 133 ELSPSDSVAMLKIAIENATGVRPDRQKLLNVKFEGKVATDNCTLADLNLK 282
E+ PSD++ +K I++ G+ PD+Q+L+ F GK D TL+D N++
Sbjct: 320 EVEPSDTIENVKAKIQDKEGIPPDQQRLI---FAGKQLEDGRTLSDYNIQ 366
>SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29)
Length = 142
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/50 (38%), Positives = 32/50 (64%)
Frame = +1
Query: 133 ELSPSDSVAMLKIAIENATGVRPDRQKLLNVKFEGKVATDNCTLADLNLK 282
E+ PSD++ +K I++ G+ PD+Q+L+ F GK D TL+D N++
Sbjct: 94 EVEPSDTIENVKAKIQDKEGIPPDQQRLI---FAGKQLEDGRTLSDYNIQ 140
>SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 147
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/50 (38%), Positives = 32/50 (64%)
Frame = +1
Query: 133 ELSPSDSVAMLKIAIENATGVRPDRQKLLNVKFEGKVATDNCTLADLNLK 282
E+ PSD++ +K I++ G+ PD+Q+L+ F GK D TL+D N++
Sbjct: 16 EVEPSDTIENVKAKIQDKEGIPPDQQRLI---FAGKQLEDGRTLSDYNIQ 62
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/65 (35%), Positives = 40/65 (61%)
Frame = +1
Query: 88 IKLSVRWNGKEFEIPELSPSDSVAMLKIAIENATGVRPDRQKLLNVKFEGKVATDNCTLA 267
+++SV+ + K F + ++ SD+V +K I+N G+ P Q+LL +E + DN +LA
Sbjct: 77 MQISVKAHWKTFTL-DVEASDTVESVKEKIQNREGIPPKVQRLL---YEEEELVDNRSLA 132
Query: 268 DLNLK 282
D N+K
Sbjct: 133 DYNIK 137
>SB_36848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 608
Score = 31.9 bits (69), Expect = 0.47
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +1
Query: 43 DKSYSQKMCDINDNPIKLSVRWNGKEFEIPELSPSDSVAMLKIAIENATGVRPD-RQKLL 219
DK++ D + S G++F +P D + + ++ A G+RPD +KLL
Sbjct: 255 DKAFKMTKVDYSGGFQSFSTLRFGQQFVDRVANPKDILLFHRKKVQQAKGIRPDIDEKLL 314
Query: 220 NVKFEGKVATDNCTLADL 273
+++ E A DN + DL
Sbjct: 315 HLRPE---ALDNTRMEDL 329
>SB_15810| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/86 (22%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = +1
Query: 94 LSVRWNGKEFEIPELSPSDSVAMLKIAIENATGVRPDRQKLL--NVKFEGKVATDNCTLA 267
++V+W ++F EL+ + + K + + V P+RQK++ +G ++
Sbjct: 9 VNVKWGKEKFGGVELNTDEPPQVFKAQLFALSSVPPERQKVMLKGAVLQGVTLMMMGSVG 68
Query: 268 DLNLKPNLKIMMMGSLEEAIVGARTK 345
D+ P K + M + EA + + K
Sbjct: 69 DIPTAPVRKTVFMEDMSEAQLASAFK 94
>SB_8941| Best HMM Match : VWA (HMM E-Value=0)
Length = 2180
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/51 (29%), Positives = 29/51 (56%)
Frame = +1
Query: 454 KINVLNEPRPGKKLLVLDIDYTLFDHRSVAETGYELMRPFLHVFLTSAYED 606
K+N+L E +P ++ +DI + + SV + +EL + F+ F+ + Y D
Sbjct: 1474 KLNMLMETKPCEE--PMDIAFLVDSSGSVGKANFELEKRFITDFVGNVYRD 1522
>SB_4896| Best HMM Match : TFIID_20kDa (HMM E-Value=2.3e-05)
Length = 819
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 4/28 (14%)
Frame = +1
Query: 19 CCCSHSFLDKS----YSQKMCDINDNPI 90
CC S S D S YS MCD++D+P+
Sbjct: 375 CCISGSKADLSDHPFYSSSMCDLSDHPL 402
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,726,686
Number of Sequences: 59808
Number of extensions: 373301
Number of successful extensions: 910
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 909
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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