Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11b11
         (514 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY084209-1|AAL89947.1|  866|Drosophila melanogaster SD08058p pro...    28   6.5  
AE014297-2098|AAF55241.1|  866|Drosophila melanogaster CG4225-PA...    28   6.5  
AY373570-1|AAR20251.1| 2726|Drosophila melanogaster 309 kDa cent...    28   8.5  
AY069802-1|AAL39947.1| 1109|Drosophila melanogaster SD04227p pro...    28   8.5  
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.       28   8.5  
AE014296-2466|AAZ83990.1| 1109|Drosophila melanogaster CG33957-P...    28   8.5  
AE014296-2465|AAZ83989.1| 2897|Drosophila melanogaster CG33957-P...    28   8.5  

>AY084209-1|AAL89947.1|  866|Drosophila melanogaster SD08058p
           protein.
          Length = 866

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = -1

Query: 469 ITI*HFLYFSFNWFHNFIVF*TVNSFCYKPAELCIIFWPMNFVRK 335
           + + +F+Y +FNW+   IVF T+  F Y  + + I  W   + R+
Sbjct: 385 VAVAYFVY-AFNWWFGLIVFLTM--FLYIASTIAITEWRTKYQRR 426


>AE014297-2098|AAF55241.1|  866|Drosophila melanogaster CG4225-PA
           protein.
          Length = 866

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = -1

Query: 469 ITI*HFLYFSFNWFHNFIVF*TVNSFCYKPAELCIIFWPMNFVRK 335
           + + +F+Y +FNW+   IVF T+  F Y  + + I  W   + R+
Sbjct: 385 VAVAYFVY-AFNWWFGLIVFLTM--FLYIASTIAITEWRTKYQRR 426


>AY373570-1|AAR20251.1| 2726|Drosophila melanogaster 309 kDa
            centrosomal protein protein.
          Length = 2726

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
 Frame = +2

Query: 116  ENFEKETKSRVAWFIRNHEEISK--RLKFSANYKGYHLEDVI---RKPIEML-LRTLSRQ 277
            + +EKE + RVA+  R  +E+ K  R K SA  +  H  + +      IE L  R ++ Q
Sbjct: 2328 QRYEKELQERVAYCERLKQEMEKLSRDKESAETELEHFNERLTLQASEIESLEARLVTLQ 2387

Query: 278  HLENNVNRRKVAPQQDPIKFTYKVHRPKN 364
              E      +    Q+ +K   ++H  K+
Sbjct: 2388 EAETRRANTRTRQHQENVKLQAEIHELKS 2416


>AY069802-1|AAL39947.1| 1109|Drosophila melanogaster SD04227p
           protein.
          Length = 1109

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
 Frame = +2

Query: 116 ENFEKETKSRVAWFIRNHEEISK--RLKFSANYKGYHLEDVI---RKPIEML-LRTLSRQ 277
           + +EKE + RVA+  R  +E+ K  R K SA  +  H  + +      IE L  R ++ Q
Sbjct: 711 QRYEKELQERVAYCERLKQEMEKLSRDKESAETELEHFNERLTLQASEIESLEARLVTLQ 770

Query: 278 HLENNVNRRKVAPQQDPIKFTYKVHRPKN 364
             E      +    Q+ +K   ++H  K+
Sbjct: 771 EAETRRANTRTRQHQENVKLQAEIHELKS 799


>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
          Length = 1227

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +2

Query: 98  IIKFLSENFEKETKSRVAWFIRNHEEIS-KRLKFSANY 208
           ++  L +  EK    R+ WFI+ H  IS  ++ F +N+
Sbjct: 518 LLSCLGKTLEKIIAQRLTWFIKRHNLISHNQVAFKSNH 555


>AE014296-2466|AAZ83990.1| 1109|Drosophila melanogaster CG33957-PC,
           isoform C protein.
          Length = 1109

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
 Frame = +2

Query: 116 ENFEKETKSRVAWFIRNHEEISK--RLKFSANYKGYHLEDVI---RKPIEML-LRTLSRQ 277
           + +EKE + RVA+  R  +E+ K  R K SA  +  H  + +      IE L  R ++ Q
Sbjct: 711 QRYEKELQERVAYCERLKQEMEKLSRDKESAETELEHFNERLTLQASEIESLEARLVTLQ 770

Query: 278 HLENNVNRRKVAPQQDPIKFTYKVHRPKN 364
             E      +    Q+ +K   ++H  K+
Sbjct: 771 EAETRRANTRTRQHQENVKLQAEIHELKS 799


>AE014296-2465|AAZ83989.1| 2897|Drosophila melanogaster CG33957-PB,
            isoform B protein.
          Length = 2897

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
 Frame = +2

Query: 116  ENFEKETKSRVAWFIRNHEEISK--RLKFSANYKGYHLEDVI---RKPIEML-LRTLSRQ 277
            + +EKE + RVA+  R  +E+ K  R K SA  +  H  + +      IE L  R ++ Q
Sbjct: 2499 QRYEKELQERVAYCERLKQEMEKLSRDKESAETELEHFNERLTLQASEIESLEARLVTLQ 2558

Query: 278  HLENNVNRRKVAPQQDPIKFTYKVHRPKN 364
              E      +    Q+ +K   ++H  K+
Sbjct: 2559 EAETRRANTRTRQHQENVKLQAEIHELKS 2587


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,408,895
Number of Sequences: 53049
Number of extensions: 359715
Number of successful extensions: 800
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 800
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1867000320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)