Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11b06
         (576 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       25   0.54 
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    24   1.2  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    24   1.2  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   2.2  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      23   2.2  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   6.6  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 25.0 bits (52), Expect = 0.54
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +3

Query: 336 PGKEGGWSRNEIMGPLLDPKLYPVRVAASPE 428
           P KE   + N++M PL +P ++  +   SPE
Sbjct: 641 PDKEHVLAHNDLMSPLDEPAVHIKQEGQSPE 671


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +2

Query: 86  TIQNFSVNGQTYKQDGSLSHHLQKRLSVAELTS 184
           +++N S+NG   +   S  H LQ RL   + TS
Sbjct: 187 SLENISLNGIDPELTESEQHRLQNRLYTNDSTS 219


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +2

Query: 86  TIQNFSVNGQTYKQDGSLSHHLQKRLSVAELTS 184
           +++N S+NG   +   S  H LQ RL   + TS
Sbjct: 225 SLENISLNGIDPELTESEQHRLQNRLYTNDSTS 257


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 316 PPEYCGHRQSGGLVCCMHAW 257
           P E  G+R + G V  +H W
Sbjct: 405 PIELSGYRLTAGTVVLLHTW 424


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 11/23 (47%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
 Frame = -3

Query: 343 FPGGSCGISPPEYCGHRQ-SGGL 278
           FPG   G+ PP+  G  Q S GL
Sbjct: 326 FPGMGHGLQPPDLAGTSQGSAGL 348


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -3

Query: 238 PDSFGVSARPEVSPSPPT 185
           PD   V   PE  P+PP+
Sbjct: 285 PDPGEVDLPPETQPTPPS 302


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,994
Number of Sequences: 438
Number of extensions: 4410
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16626408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)