Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11b05
(689 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_3355| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.50
SB_48592| Best HMM Match : Galactosyl_T (HMM E-Value=1.5e-26) 30 1.5
SB_19503| Best HMM Match : Kinesin (HMM E-Value=9.5e-14) 30 1.5
SB_10586| Best HMM Match : RVT_1 (HMM E-Value=0.039) 30 1.5
SB_3105| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_24844| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_47532| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_45858| Best HMM Match : Chromadorea_ALT (HMM E-Value=2.9) 29 3.6
SB_34008| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_19700| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 29 4.7
SB_25374| Best HMM Match : DUF1087 (HMM E-Value=3.2) 29 4.7
SB_48595| Best HMM Match : Transposase_29 (HMM E-Value=3.5) 28 6.2
SB_37510| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_24799| Best HMM Match : Integrase_Zn (HMM E-Value=7.2) 28 6.2
SB_7209| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_59805| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_59366| Best HMM Match : 7tm_1 (HMM E-Value=5.2e-23) 28 8.2
SB_56265| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_56054| Best HMM Match : rve (HMM E-Value=0.011) 28 8.2
SB_10312| Best HMM Match : MpPF2 (HMM E-Value=0.26) 28 8.2
SB_32459| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_22532| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_5814| Best HMM Match : PKD (HMM E-Value=6.3e-10) 28 8.2
>SB_3355| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 752
Score = 32.7 bits (71), Expect = 0.29
Identities = 17/57 (29%), Positives = 32/57 (56%)
Frame = +3
Query: 366 VINPYEPNSLANEDDLDNLQNHKLNLKTSKTFETTTRPSRSINDFNRKILHCNCPAQ 536
++ +E A+ D + +++ LN + SK FE + ++S +DF R +L N PA+
Sbjct: 245 LLKQHEQEMFAHLDGVRDVKKENLNYQ-SKAFEASLVQAQSASDFVRPLLQRNIPAE 300
>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6406
Score = 31.9 bits (69), Expect = 0.50
Identities = 20/84 (23%), Positives = 39/84 (46%)
Frame = +3
Query: 366 VINPYEPNSLANEDDLDNLQNHKLNLKTSKTFETTTRPSRSINDFNRKILHCNCPAQSED 545
V + +E N L + + N K + K K + T + N+ +R++ HC C Q
Sbjct: 6076 VASKFERNGLIDYKEFMNALKDKPSAK--KPEKPKTDAQKIHNEIDRQVEHCCCAKQFSY 6133
Query: 546 NRCSSAEYQFRTASLIRKLRDIKA 617
+ +Y+F + +R LR +++
Sbjct: 6134 FKVGENKYRFGDSQKLRLLRILRS 6157
>SB_48592| Best HMM Match : Galactosyl_T (HMM E-Value=1.5e-26)
Length = 492
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +3
Query: 15 GKTISRKLLVRKFIKMDDSNTLDQEDEFEKYLEILKSYLNELQDQ 149
G +S+KL+ + + + DQE+ KYLE L+++ NE+ +
Sbjct: 355 GDFVSKKLVPHFYTMLLKQDKEDQEEAKTKYLEGLRTFTNEMDPE 399
>SB_19503| Best HMM Match : Kinesin (HMM E-Value=9.5e-14)
Length = 869
Score = 30.3 bits (65), Expect = 1.5
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 6/125 (4%)
Frame = +3
Query: 63 DDSNTLDQEDEFEKYLEILKSYLNELQ--DQKLLEICSAWVVRLSACRDDEKSLRNRYIF 236
+DS+ L + E K E++K NE+ + + E RL A D + + RN
Sbjct: 267 EDSSYLGHQTETSKLKELIKQRDNEISILCKAMEERLDCEAQRLRARSDLQHAARNGLWD 326
Query: 237 SLCYQLSK-GVLDDPFTQSPSANINLPPLVDSLQSENSSEVEYAVINPYEPNS---LANE 404
+LC+ K + D T+ + +N+ Q +N++ A + P S L N
Sbjct: 327 ALCFSGDKLDAILDINTRGNNRYLNVAQSAMLQQIDNATLTTLAQLEKTIPESVITLENP 386
Query: 405 DDLDN 419
DD D+
Sbjct: 387 DDCDD 391
>SB_10586| Best HMM Match : RVT_1 (HMM E-Value=0.039)
Length = 590
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +3
Query: 522 NCPAQSEDNRCSSAEYQFRTASLIRKLRDIKAQNSLLHNELESLRHDTLRSQNN 683
N P +SEDN + + + L K+++++ QN L ++ + L ++ R N+
Sbjct: 79 NVPNESEDNASVARALHKKISILQSKIQELRKQNETLASQKKVLENEVFRLANS 132
>SB_3105| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 501
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -2
Query: 349 DEFSLCKLSTRGGKLMFAEGDCVNGSSKT-PLDN**HKEKMYLLRKDFSSSLHAESL 182
D ++ C L T G+L+ AE D +T P D + MY ++KD ++ +L
Sbjct: 245 DGYTSCPLVTGYGRLVLAEFDFEGNPLETFPFDQGKERSSMYYMKKDILPEVYWNAL 301
>SB_24844| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 199
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +3
Query: 414 DNLQNHKLNLKTSKTFETTTRPSRSINDFNRK--ILHCNCPAQSEDNRCSSAEYQFRTAS 587
DN++ HK + KT+ T+ R+ RK + C A++ N ++ + Q T
Sbjct: 37 DNVKQHKCHAKTTCNNTNVTQRQRATTQIPRKDNVQQHKCHAKTTCNNTNATQRQRATTQ 96
Query: 588 LIRK 599
+ RK
Sbjct: 97 MPRK 100
>SB_47532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 674
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +3
Query: 306 NLPPLVDSLQSENSSEVEYAVINPYEPNSLANEDDLDNLQ 425
NL V S ++ENS+ + N ++ NS A EDDL+N++
Sbjct: 103 NLNAKVRSKKNENSTPFHFEK-NGHKKNSDAKEDDLENIR 141
>SB_45858| Best HMM Match : Chromadorea_ALT (HMM E-Value=2.9)
Length = 291
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 516 HCNCPAQSEDNRCSSA-EYQFRTASLIRKLRDIKAQNSLLHNELESLR 656
H N + D C SA + F A I +RD K Q S LH EL+ +R
Sbjct: 54 HANGRKSARDEHCESAVQTHFDIACEI--IRDNKNQISALHKELDQVR 99
>SB_34008| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/77 (25%), Positives = 32/77 (41%)
Frame = +3
Query: 291 PSANINLPPLVDSLQSENSSEVEYAVINPYEPNSLANEDDLDNLQNHKLNLKTSKTFETT 470
PSAN++ P+ DS ++S V I + + + + N L S FE
Sbjct: 676 PSANVS--PMSDSFSQSDTSAVFSPSIMASDFSQASETSPVPNHMEEDLQQFQSSLFENQ 733
Query: 471 TRPSRSINDFNRKILHC 521
+ S +ND + L C
Sbjct: 734 QQDSLLLNDIDENNLSC 750
>SB_19700| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 664
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +3
Query: 483 RSINDFNRKILHCNCPAQSEDNRCSSAEYQFRTASLIRKLRDIK 614
R I DF + + Q+ ++R AE QFR L KL++++
Sbjct: 58 RKIKDFVQSLARLERQDQTPESRKKVAELQFRITELKNKLKELE 101
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 28.7 bits (61), Expect = 4.7
Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 7/113 (6%)
Frame = +3
Query: 366 VINPYEPNSLANEDDLDNLQNHKLNLKTSKTFETTTRPSRSINDFN--RKILHCNCPAQS 539
+IN A E D + L+ +++T+ T T + + +N RK+ Q
Sbjct: 1697 IINSLRAQKDALERDNNMLKQEIKSIRTTLTEVQTKKGELEADVYNLKRKLGESELKLQM 1756
Query: 540 E--DNRCSSAEY---QFRTASLIRKLRDIKAQNSLLHNELESLRHDTLRSQNN 683
+N +AE Q R ASL L + +N+ L +L+ LRH R++ +
Sbjct: 1757 SLTENDNLNAELINAQKRIASLEEDLHRAQQENANLRGQLDELRHQMARAKED 1809
>SB_25374| Best HMM Match : DUF1087 (HMM E-Value=3.2)
Length = 144
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +3
Query: 324 DSLQSENSSEVEYAVINPYEPNSLANEDDLDNLQNHKLNLKTSKTFETTTRPSRSINDFN 503
D+ S+NS+ + ++N NS +++ L N + KLN S + + + S S N +
Sbjct: 81 DNSNSDNSNSDKLKLVNSNPDNSNSDKLKLVNSNSDKLNSDNSNSDNSNSDNSNSDNSNS 140
Query: 504 RKI 512
K+
Sbjct: 141 NKL 143
>SB_48595| Best HMM Match : Transposase_29 (HMM E-Value=3.5)
Length = 565
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 60 MDDSNTLDQEDEFEKYLEILKSYLNELQDQK 152
M+DS +LD + Y+ ILK Y+ E+ D K
Sbjct: 18 MNDSLSLDMAGINKTYITILKRYMVEINDSK 48
>SB_37510| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 28.3 bits (60), Expect = 6.2
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 10/80 (12%)
Frame = +3
Query: 339 ENSSEVEYAVINPYEPNSLANEDDLDNLQN-HKLNLKTSKTF---------ETTTRPSRS 488
+NSS Y + N + NS N + N + N SK F ETTT PS +
Sbjct: 84 DNSSNNNYTINN--KNNSRNNNYTISTSNNNYTTNYNKSKNFTTRTKTTTSETTTTPSTT 141
Query: 489 INDFNRKILHCNCPAQSEDN 548
N+ N NC + + +N
Sbjct: 142 KNNRNNTATSNNCTSNTSNN 161
>SB_24799| Best HMM Match : Integrase_Zn (HMM E-Value=7.2)
Length = 128
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 60 MDDSNTLDQEDEFEKYLEILKSYLNELQDQK 152
M+DS +LD + Y+ ILK Y+ E+ D K
Sbjct: 18 MNDSLSLDMAGINKTYITILKRYMVEINDSK 48
>SB_7209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 312 PPLVDSLQSENSSEVEYAVINPYEPNS-LANEDDLDNLQNHKLNLKTSKTFET 467
PP DS+ E + ++ ++ P +A D+ +NHKLN+ + T
Sbjct: 361 PPSPDSIPDETTPREQHGLLKIMTPEDRIACGLDIKETKNHKLNITVKEEVHT 413
>SB_59805| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 446
Score = 27.9 bits (59), Expect = 8.2
Identities = 10/32 (31%), Positives = 23/32 (71%)
Frame = +3
Query: 48 KFIKMDDSNTLDQEDEFEKYLEILKSYLNELQ 143
+ I + D++ LD DEF++ +E+L+ Y ++++
Sbjct: 84 RIILLFDAHKLDISDEFQRGIEVLRDYDDKIR 115
>SB_59366| Best HMM Match : 7tm_1 (HMM E-Value=5.2e-23)
Length = 363
Score = 27.9 bits (59), Expect = 8.2
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 211 NPYVIDTFFLYVISYLKVF 267
N V+ TFF+Y+++Y KVF
Sbjct: 173 NTAVVATFFVYMLTYFKVF 191
>SB_56265| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 126
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 681 YFGISVYRVSKIPTRCATSYFVPLYHEVF 595
YF YRV RC YF P+++ VF
Sbjct: 88 YFYPVFYRVFLPDVRCFIGYFYPMFYRVF 116
>SB_56054| Best HMM Match : rve (HMM E-Value=0.011)
Length = 372
Score = 27.9 bits (59), Expect = 8.2
Identities = 32/143 (22%), Positives = 57/143 (39%), Gaps = 1/143 (0%)
Frame = +3
Query: 84 QEDEFEKYLEILKSYLNELQDQKLLEICSAW-VVRLSACRDDEKSLRNRYIFSLCYQLSK 260
+ED LE + N ++ K L I W +RL R K + + S
Sbjct: 125 KEDRCRLKLEQQRQCKNYNKNAKDLGILQEWDTIRLKPFRKGNKKWEKGVVVRRLDERSY 184
Query: 261 GVLDDPFTQSPSANINLPPLVDSLQSENSSEVEYAVINPYEPNSLANEDDLDNLQNHKLN 440
+ + P + I+L ++ Q E SS V+ P E S+ + D ++ + +
Sbjct: 185 DI-ETPSGKYRRNRIDLRKTSET-QPELSSRKPEVVLPPAEMESILDVSDDEDSSDESSS 242
Query: 441 LKTSKTFETTTRPSRSINDFNRK 509
+K +TT S++ NR+
Sbjct: 243 KTNAKPTDTTAATSKNKKKRNRR 265
>SB_10312| Best HMM Match : MpPF2 (HMM E-Value=0.26)
Length = 522
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Frame = +3
Query: 594 RKLRDIKAQNSLLHNELESL--RHDTLRSQ 677
R+L DIK NS+L NE+ L R+ L+SQ
Sbjct: 442 RELADIKCTNSILENEVSILKNRNSDLQSQ 471
>SB_32459| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2011
Score = 27.9 bits (59), Expect = 8.2
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = -3
Query: 225 YYVRIFHRLYMLKVLQPMHYR 163
+++R+ RL+ML+VLQ +H R
Sbjct: 466 FFLRVKTRLFMLRVLQTLHIR 486
>SB_22532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 698
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -3
Query: 171 HYRFQEAFDLEARSNNFLKFPNTFRIHLPDLMYSNH 64
HYR + F + + NNFL+ + + HL D Y H
Sbjct: 471 HYRCMKCFSVYSSRNNFLR--HVSKAHLYDTYYQCH 504
>SB_5814| Best HMM Match : PKD (HMM E-Value=6.3e-10)
Length = 460
Score = 27.9 bits (59), Expect = 8.2
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = -3
Query: 225 YYVRIFHRLYMLKVLQPMHYR 163
+++R+ RL+ML+VLQ +H R
Sbjct: 295 FFLRVKTRLFMLRVLQTLHIR 315
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,342,295
Number of Sequences: 59808
Number of extensions: 347969
Number of successful extensions: 1323
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1321
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1793485733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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