Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11b05
(689 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016665-6|AAL02468.1| 655|Caenorhabditis elegans Hypothetical ... 31 0.78
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 30 1.4
AF068721-2|AAC19262.1| 396|Caenorhabditis elegans Hypothetical ... 30 1.4
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 30 1.4
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 30 1.4
Z83108-6|CAB05512.1| 833|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical p... 30 1.8
Z50070-13|CAA90402.1| 833|Caenorhabditis elegans Hypothetical p... 30 1.8
Z50029-5|CAC42384.1| 1096|Caenorhabditis elegans Hypothetical pr... 30 1.8
AF087133-1|AAD14595.1| 728|Caenorhabditis elegans alternatively... 30 1.8
AC006648-9|AAF39858.2| 306|Caenorhabditis elegans Btb and math ... 29 4.1
Z81507-2|CAB04135.1| 388|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z72516-3|CAA96688.2| 1322|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z68159-7|CAA92286.1| 604|Caenorhabditis elegans Hypothetical pr... 28 7.2
AY874871-1|AAX62732.1| 1322|Caenorhabditis elegans chitin syntha... 28 7.2
Z74043-5|CAA98544.1| 588|Caenorhabditis elegans Hypothetical pr... 27 9.6
AC025716-10|AAK39607.1| 474|Caenorhabditis elegans Hypothetical... 27 9.6
>AF016665-6|AAL02468.1| 655|Caenorhabditis elegans Hypothetical
protein C49D10.10 protein.
Length = 655
Score = 31.1 bits (67), Expect = 0.78
Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 14/153 (9%)
Frame = +3
Query: 33 KLLVRKFIKMDDSNTLDQEDEFEKYLEILKSY--LNELQDQKLL-EI------CSAWVVR 185
K L+R F+ + S+T E+ + E K + L +Q LL EI +W V
Sbjct: 115 KRLIRDFLHKNQSSTSKSENSMKLLYEKCKEAKTIKVLGNQNLLQEIFMNIQKIGSWPV- 173
Query: 186 LSACRDDEKSLRNRYIFSLCYQLSKGVLDDPFTQ---SPSANINLPPLVDSLQSENSSEV 356
L D +K N + SL + GV + F + S A + + P + EN S++
Sbjct: 174 LDENWDGKKFNLNEMLLSL---IRLGVSNFGFFEIIISSDAFVEIKPARNFPTRENLSDI 230
Query: 357 EYAVI--NPYEPNSLANEDDLDNLQNHKLNLKT 449
V N ++PN A E+DL +N + LK+
Sbjct: 231 ISKVFLGNGFQPNITAIENDLREYENLQRELKS 263
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 30.3 bits (65), Expect = 1.4
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 9/105 (8%)
Frame = +3
Query: 267 LDDPFTQSPSANINL--PPLVDSLQSENSSEVEYAVINPYE---PNSLANEDDLDNLQNH 431
+DD +T + N + P +DS+ + + + ++ P N E DNL+NH
Sbjct: 1330 MDDKYTATFYHNSSQKGPIYIDSITAVPYNSYKDKLMEPLALDLSNEFLKECSEDNLKNH 1389
Query: 432 KLNLKT---SKTFETTTRPSRSINDFNRKILHCNCPAQ-SEDNRC 554
++ K F TT DFN L C+C AQ SE +C
Sbjct: 1390 PESVSDFCKQKIFSLTT-------DFNAAALSCDCVAQGSESFQC 1427
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 30.3 bits (65), Expect = 1.4
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 9/105 (8%)
Frame = +3
Query: 267 LDDPFTQSPSANINL--PPLVDSLQSENSSEVEYAVINPYE---PNSLANEDDLDNLQNH 431
+DD +T + N + P +DS+ + + + ++ P N E DNL+NH
Sbjct: 1330 MDDKYTATFYHNSSQKGPIYIDSITAVPYNSYKDKLMEPLALDLSNEFLKECSEDNLKNH 1389
Query: 432 KLNLKT---SKTFETTTRPSRSINDFNRKILHCNCPAQ-SEDNRC 554
++ K F TT DFN L C+C AQ SE +C
Sbjct: 1390 PESVSDFCKQKIFSLTT-------DFNAAALSCDCVAQGSESFQC 1427
>AF068721-2|AAC19262.1| 396|Caenorhabditis elegans Hypothetical
protein ZK1055.4 protein.
Length = 396
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = -3
Query: 636 CATSYFVPLYHEVF*LD*QS*IDIPQRNTDYLLTERGNYNVGFFD*NH*YSLKV-SLLSQ 460
C S +P + V LD + P+R + + + N+++ F+D + + + S L+
Sbjct: 142 CIVSKILPNFDAVLFLDADIGVVYPKRRIEEYMYQ--NFDIIFYDRFYNWEIMAGSYLAM 199
Query: 459 KFCLSLNLIYDFANYQGRL 403
++ ++DFANY+ L
Sbjct: 200 NTPYAIKFLHDFANYENTL 218
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 30.3 bits (65), Expect = 1.4
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 9/105 (8%)
Frame = +3
Query: 267 LDDPFTQSPSANINL--PPLVDSLQSENSSEVEYAVINPYE---PNSLANEDDLDNLQNH 431
+DD +T + N + P +DS+ + + + ++ P N E DNL+NH
Sbjct: 1330 MDDKYTATFYHNSSQKGPIYIDSITAVPYNSYKDKLMEPLALDLSNEFLKECSEDNLKNH 1389
Query: 432 KLNLKT---SKTFETTTRPSRSINDFNRKILHCNCPAQ-SEDNRC 554
++ K F TT DFN L C+C AQ SE +C
Sbjct: 1390 PESVSDFCKQKIFSLTT-------DFNAAALSCDCVAQGSESFQC 1427
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 30.3 bits (65), Expect = 1.4
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 9/105 (8%)
Frame = +3
Query: 267 LDDPFTQSPSANINL--PPLVDSLQSENSSEVEYAVINPYE---PNSLANEDDLDNLQNH 431
+DD +T + N + P +DS+ + + + ++ P N E DNL+NH
Sbjct: 1330 MDDKYTATFYHNSSQKGPIYIDSITAVPYNSYKDKLMEPLALDLSNEFLKECSEDNLKNH 1389
Query: 432 KLNLKT---SKTFETTTRPSRSINDFNRKILHCNCPAQ-SEDNRC 554
++ K F TT DFN L C+C AQ SE +C
Sbjct: 1390 PESVSDFCKQKIFSLTT-------DFNAAALSCDCVAQGSESFQC 1427
>Z83108-6|CAB05512.1| 833|Caenorhabditis elegans Hypothetical
protein F43G6.9 protein.
Length = 833
Score = 29.9 bits (64), Expect = 1.8
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Frame = +3
Query: 402 EDDLDNLQNHKLNLKTSKTFETTTR-PSRSINDFNRKILHCNCPAQSEDNRCSSAEYQFR 578
++ +D ++ KL S F T+ PS+S R +L +S DN+ + R
Sbjct: 538 QERIDRGEDKKLRQTLSDKFATSLGLPSKSSTHNPRHVLDMKAQVESVDNQTKKLSDEER 597
Query: 579 TASLIRKLRD--IKAQNSL-LHNELESLRHDTL 668
++ +KLR ++ + +L + E++ LR +L
Sbjct: 598 KIAVAKKLRTMLLRLEGALNILMEVDELRRSSL 630
>Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical
protein K07A1.11 protein.
Length = 412
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/78 (24%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Frame = +3
Query: 240 LCYQLSKGVLDDPFTQSPSANINLPPLVDSLQSENSSEVEYAVINPYEPNSLANEDDLDN 419
+ + +SK + DP + S +++ ++PP V + + ++ +V NP P ++ + D+ +
Sbjct: 334 IVWDISK--IQDPSSSSAASSDSVPPEVIFIHAGHTGKVADFSWNPNRPWTICSSDEFNA 391
Query: 420 LQNHKL--NLKTSKTFET 467
LQ ++ +L +S+ +ET
Sbjct: 392 LQVWEVSNSLVSSEKWET 409
>Z50070-13|CAA90402.1| 833|Caenorhabditis elegans Hypothetical
protein F43G6.9 protein.
Length = 833
Score = 29.9 bits (64), Expect = 1.8
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Frame = +3
Query: 402 EDDLDNLQNHKLNLKTSKTFETTTR-PSRSINDFNRKILHCNCPAQSEDNRCSSAEYQFR 578
++ +D ++ KL S F T+ PS+S R +L +S DN+ + R
Sbjct: 538 QERIDRGEDKKLRQTLSDKFATSLGLPSKSSTHNPRHVLDMKAQVESVDNQTKKLSDEER 597
Query: 579 TASLIRKLRD--IKAQNSL-LHNELESLRHDTL 668
++ +KLR ++ + +L + E++ LR +L
Sbjct: 598 KIAVAKKLRTMLLRLEGALNILMEVDELRRSSL 630
>Z50029-5|CAC42384.1| 1096|Caenorhabditis elegans Hypothetical
protein ZC504.4c protein.
Length = 1096
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/69 (23%), Positives = 28/69 (40%)
Frame = +3
Query: 255 SKGVLDDPFTQSPSANINLPPLVDSLQSENSSEVEYAVINPYEPNSLANEDDLDNLQNHK 434
S+G L D +SP + + + + E + Y+PN N D ++Q+
Sbjct: 655 SRGALPDLLPKSPQLRRQINDQTRQMSDDRADESASLFGSFYQPNGFQNSDSRSSIQHSF 714
Query: 435 LNLKTSKTF 461
N K+F
Sbjct: 715 SNRDREKSF 723
>AF087133-1|AAD14595.1| 728|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 728
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/69 (23%), Positives = 28/69 (40%)
Frame = +3
Query: 255 SKGVLDDPFTQSPSANINLPPLVDSLQSENSSEVEYAVINPYEPNSLANEDDLDNLQNHK 434
S+G L D +SP + + + + E + Y+PN N D ++Q+
Sbjct: 287 SRGALPDLLPKSPQLRRQINDQTRQMSDDRADESASLFGSFYQPNGFQNSDSRSSIQHSF 346
Query: 435 LNLKTSKTF 461
N K+F
Sbjct: 347 SNRDREKSF 355
>AC006648-9|AAF39858.2| 306|Caenorhabditis elegans Btb and math
domain containingprotein 3 protein.
Length = 306
Score = 28.7 bits (61), Expect = 4.1
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 513 LHCNCPAQSEDNRCSSAEYQF 575
LHCN Q+E+ C +AE++F
Sbjct: 53 LHCNILGQTEETWCINAEFEF 73
>Z81507-2|CAB04135.1| 388|Caenorhabditis elegans Hypothetical
protein F18A11.2 protein.
Length = 388
Score = 27.9 bits (59), Expect = 7.2
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +3
Query: 18 KTISRKLLVRKFIKMDD--SNTLDQEDEFEKYLEILKSYLNELQDQKLL 158
K + R L +RK I ++ S T +EDE KY+ I N D K+L
Sbjct: 48 KALKRHLNIRKTIDLNSYSSKTELEEDELNKYVPIDVIGQNHQDDNKVL 96
>Z72516-3|CAA96688.2| 1322|Caenorhabditis elegans Hypothetical
protein T25G3.2 protein.
Length = 1322
Score = 27.9 bits (59), Expect = 7.2
Identities = 20/104 (19%), Positives = 42/104 (40%)
Frame = +3
Query: 162 ICSAWVVRLSACRDDEKSLRNRYIFSLCYQLSKGVLDDPFTQSPSANINLPPLVDSLQSE 341
+C W + + ++ CY+ + V F + ++PP+ + L E
Sbjct: 386 VCDQWFQSARGIASPDFYICLIWLLVGCYRGWRLVRQRYFDTNEEIISSMPPVCNGLCIE 445
Query: 342 NSSEVEYAVINPYEPNSLANEDDLDNLQNHKLNLKTSKTFETTT 473
S V +N E L E+D+ + +N +L ++ + +T
Sbjct: 446 QSLVVFQHSLNRQEKTMLTEEEDISD-ENDELRIRNDEVDRVST 488
>Z68159-7|CAA92286.1| 604|Caenorhabditis elegans Hypothetical
protein C33D9.8 protein.
Length = 604
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +3
Query: 390 SLANEDDLDNLQNHKLNLKTSKTFETTTRPSRSINDFNRKILHCNCPAQSE 542
+L + DL LQN K L+ +T E + +N +++L QSE
Sbjct: 108 TLRKDLDLSKLQNAKDKLEIYETQEENQKLEAEVNALRKEVLESKLSEQSE 158
>AY874871-1|AAX62732.1| 1322|Caenorhabditis elegans chitin synthase
1 protein.
Length = 1322
Score = 27.9 bits (59), Expect = 7.2
Identities = 20/104 (19%), Positives = 42/104 (40%)
Frame = +3
Query: 162 ICSAWVVRLSACRDDEKSLRNRYIFSLCYQLSKGVLDDPFTQSPSANINLPPLVDSLQSE 341
+C W + + ++ CY+ + V F + ++PP+ + L E
Sbjct: 386 VCDQWFQSARGIASPDFYICLIWLLVGCYRGWRLVRQRYFDTNEEIISSMPPVCNGLCIE 445
Query: 342 NSSEVEYAVINPYEPNSLANEDDLDNLQNHKLNLKTSKTFETTT 473
S V +N E L E+D+ + +N +L ++ + +T
Sbjct: 446 QSLVVFQHSLNRQEKTMLTEEEDISD-ENDELRIRNDEVDRVST 488
>Z74043-5|CAA98544.1| 588|Caenorhabditis elegans Hypothetical
protein T19B10.9 protein.
Length = 588
Score = 27.5 bits (58), Expect = 9.6
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Frame = +3
Query: 291 PSANINLPPLVDSLQSENSSEVEYAVINPYEPNSLANEDD------LDNLQNHKLNLKTS 452
PS+ NL D L+ NS E + I PY P +A + +D++ ++N ++S
Sbjct: 65 PSSVNNLGTGTDQLEMINSPEKKNNDITPY-PGYIAPPPEPSFPTLIDSVDVPRVNQQSS 123
Query: 453 KTFETTTRPSRSINDFNRKILHC 521
T+ + T P + ++ R+ L C
Sbjct: 124 NTYRSET-PLQLLSQDTRRDLSC 145
>AC025716-10|AAK39607.1| 474|Caenorhabditis elegans Hypothetical
protein Y39G10AR.7 protein.
Length = 474
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/82 (20%), Positives = 32/82 (39%)
Frame = +3
Query: 210 KSLRNRYIFSLCYQLSKGVLDDPFTQSPSANINLPPLVDSLQSENSSEVEYAVINPYEPN 389
K L CYQL+ D P+ +PP ++ + + E + + + +
Sbjct: 367 KCLEPHLFVEYCYQLTAAAYVDTGLNYPNRRPPIPPRMEPIPEQACRESICSSASEFSSD 426
Query: 390 SLANEDDLDNLQNHKLNLKTSK 455
DD D+ +N +L K +
Sbjct: 427 G-EYSDDSDDTKNERLRQKLER 447
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,120,267
Number of Sequences: 27780
Number of extensions: 286664
Number of successful extensions: 1058
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1058
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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