Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11b05
(689 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ435332-1|ABD92647.1| 135|Apis mellifera OBP15 protein. 25 0.90
DQ435338-1|ABD92653.1| 135|Apis mellifera OBP21 protein. 24 1.2
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 24 1.2
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 22 4.8
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 22 4.8
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 22 6.3
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 21 8.4
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 21 8.4
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 21 8.4
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 21 8.4
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 21 8.4
>DQ435332-1|ABD92647.1| 135|Apis mellifera OBP15 protein.
Length = 135
Score = 24.6 bits (51), Expect = 0.90
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 78 LDQEDEFEKYL--EILKSYLNELQDQKLLEICSA 173
+D++ F +++ EI K +LNE + +L+ CSA
Sbjct: 73 VDKDGNFNEHVSREIAKIFLNENEINQLITECSA 106
>DQ435338-1|ABD92653.1| 135|Apis mellifera OBP21 protein.
Length = 135
Score = 24.2 bits (50), Expect = 1.2
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +3
Query: 39 LVRKFIKMDDSNTLDQEDEFEKYLEILKSYLNELQDQKLLEICSA 173
L++KF DD ++ EI + YL+E + KL+ CSA
Sbjct: 66 LIKKFNAYDDGGNFNEV----VVREIAEIYLDENEVNKLITECSA 106
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 24.2 bits (50), Expect = 1.2
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +3
Query: 486 SINDFNRKILHCNCPAQSEDNRCS 557
S++D+N K + +C E+N CS
Sbjct: 150 SLSDYNDKPIPASCCNSPENNTCS 173
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 22.2 bits (45), Expect = 4.8
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +3
Query: 45 RKFIKMDDSNTLDQEDEFEKYLEI 116
R + +D++NT DQ+ + YL +
Sbjct: 360 RSWSSLDNTNTNDQDYSSQNYLTV 383
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 22.2 bits (45), Expect = 4.8
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = +3
Query: 282 TQSPSANINLPPLVDSLQSENSSEVEYAVINP 377
T SP + + L + + +S +EY + NP
Sbjct: 400 TTSPQSQSTIQTLRPQVSPDRTSPMEYRLYNP 431
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.8 bits (44), Expect = 6.3
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 538 QKIIGVPLRNINSGLLV*LENFV 606
QKI+ L + NSG L+ +EN +
Sbjct: 1111 QKILAKVLTSSNSGQLISVENLL 1133
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 21.4 bits (43), Expect = 8.4
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = +3
Query: 21 TISRKLLVRKFIKMDDSNTLDQEDEFEKYLEILKSYLNEL 140
T+ K L+ KMD + E FE+ + + SY+ ++
Sbjct: 69 TLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKI 108
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.4 bits (43), Expect = 8.4
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 7/59 (11%)
Frame = -3
Query: 222 YVRIFHRLYMLKVLQPMHYRFQEAF-DLEARSNNF------LKFPNTFRIHLPDLMYSN 67
+VR + +K+ + F+E + D R N+F L + R+ +PDL +SN
Sbjct: 66 FVRSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLTLTDASRVWMPDLFFSN 124
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 21.4 bits (43), Expect = 8.4
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = +3
Query: 21 TISRKLLVRKFIKMDDSNTLDQEDEFEKYLEILKSYLNEL 140
T+ K L+ KMD + E FE+ + + SY+ ++
Sbjct: 85 TLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKI 124
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 21.4 bits (43), Expect = 8.4
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +3
Query: 390 SLANEDDLDNLQNHKLNLKTSKTFE 464
++ NED LDNL + + K+ E
Sbjct: 33 TIFNEDKLDNLMDKQFKNKSLPVIE 57
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 21.4 bits (43), Expect = 8.4
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = +3
Query: 21 TISRKLLVRKFIKMDDSNTLDQEDEFEKYLEILKSYLNEL 140
T+ K L+ KMD + E FE+ + + SY+ ++
Sbjct: 142 TLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKI 181
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,668
Number of Sequences: 438
Number of extensions: 3661
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21073995
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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