Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11b01
(499 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 23 1.3
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 23 1.3
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 23 1.8
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 23 1.8
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 23 1.8
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 23 1.8
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 23 1.8
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 23 1.8
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 23 1.8
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 23 1.8
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 23 1.8
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 23 1.8
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 23 1.8
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 23 1.8
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 23 1.8
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 2.3
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 2.3
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 23 2.3
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 23 2.3
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 23 2.3
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 2.3
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 3.1
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 3.1
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 3.1
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 21 5.4
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 5.4
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 5.4
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 21 5.4
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 5.4
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 21 5.4
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 7.1
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.4
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.4
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.4
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.4
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.4
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 9.4
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 23.4 bits (48), Expect = 1.3
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = +1
Query: 46 FNQTFFYFIFLLYLSCC 96
F + F Y++ +Y+ CC
Sbjct: 237 FKREFSYYLIQIYIPCC 253
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 23.4 bits (48), Expect = 1.3
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = +1
Query: 46 FNQTFFYFIFLLYLSCC 96
F + F Y++ +Y+ CC
Sbjct: 237 FKREFSYYLIQIYIPCC 253
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 23.0 bits (47), Expect = 1.8
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = -3
Query: 386 AASDTAVPTAVVRAGYSSTVAVHISAPPTRV*TISTSRVHATGTNL 249
+++D+ P + Y+ V +S PPT+ T+ + H TNL
Sbjct: 880 SSTDSRNPALALAEPYNQRGTV-VSPPPTKRRTMKVVKYHLFLTNL 924
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 23.0 bits (47), Expect = 1.8
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = -3
Query: 386 AASDTAVPTAVVRAGYSSTVAVHISAPPTRV*TISTSRVHATGTNL 249
+++D+ P + Y+ V +S PPT+ T+ + H TNL
Sbjct: 918 SSTDSRNPALALAEPYNQRGTV-VSPPPTKRRTMKVVKYHLFLTNL 962
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 23.0 bits (47), Expect = 1.8
Identities = 21/60 (35%), Positives = 24/60 (40%), Gaps = 11/60 (18%)
Frame = -2
Query: 384 SLRYSRAHSCSTSR-----------LLLHGSRAYLRTANTSLNNKHLSRARNRDQLDRSN 238
S RYSR SCS R LH + L TS K SR+R R+Q N
Sbjct: 217 SSRYSRERSCSRDRNREYRKKDRQYEKLHNEKEKLLEERTS--RKRYSRSREREQKSYKN 274
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.0 bits (47), Expect = 1.8
Identities = 21/60 (35%), Positives = 24/60 (40%), Gaps = 11/60 (18%)
Frame = -2
Query: 384 SLRYSRAHSCSTSR-----------LLLHGSRAYLRTANTSLNNKHLSRARNRDQLDRSN 238
S RYSR SCS R LH + L TS K SR+R R+Q N
Sbjct: 228 SSRYSRERSCSRDRNREYRKKDRQYEKLHNEKEKLLEERTS--RKRYSRSREREQKSYKN 285
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.0 bits (47), Expect = 1.8
Identities = 21/60 (35%), Positives = 24/60 (40%), Gaps = 11/60 (18%)
Frame = -2
Query: 384 SLRYSRAHSCSTSR-----------LLLHGSRAYLRTANTSLNNKHLSRARNRDQLDRSN 238
S RYSR SCS R LH + L TS K SR+R R+Q N
Sbjct: 228 SSRYSRERSCSRDRNREYRKKDRQYEKLHNEKEKLLEERTS--RKRYSRSREREQKSYKN 285
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 23.0 bits (47), Expect = 1.8
Identities = 21/60 (35%), Positives = 24/60 (40%), Gaps = 11/60 (18%)
Frame = -2
Query: 384 SLRYSRAHSCSTSR-----------LLLHGSRAYLRTANTSLNNKHLSRARNRDQLDRSN 238
S RYSR SCS R LH + L TS K SR+R R+Q N
Sbjct: 217 SSRYSRERSCSRDRNREYRKKDRQYEKLHNEKEKLLEERTS--RKRYSRSREREQKSYKN 274
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 23.0 bits (47), Expect = 1.8
Identities = 21/60 (35%), Positives = 24/60 (40%), Gaps = 11/60 (18%)
Frame = -2
Query: 384 SLRYSRAHSCSTSR-----------LLLHGSRAYLRTANTSLNNKHLSRARNRDQLDRSN 238
S RYSR SCS R LH + L TS K SR+R R+Q N
Sbjct: 228 SSRYSRERSCSRDRNREYRKKDRRYEKLHNEKEKLLEERTS--RKRYSRSREREQKSYKN 285
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 23.0 bits (47), Expect = 1.8
Identities = 21/60 (35%), Positives = 24/60 (40%), Gaps = 11/60 (18%)
Frame = -2
Query: 384 SLRYSRAHSCSTSR-----------LLLHGSRAYLRTANTSLNNKHLSRARNRDQLDRSN 238
S RYSR SCS R LH + L TS K SR+R R+Q N
Sbjct: 217 SSRYSRERSCSRDRNREYRKKDRQYEKLHNEKEKLLEERTS--RKRYSRSREREQKSYKN 274
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 23.0 bits (47), Expect = 1.8
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = +1
Query: 181 VWVVRGLCLARAVPWPIEWIAAVKLVPVACTREVLIVQTRVGGA 312
VW++ C+ + V W + + L P A +LI + GA
Sbjct: 216 VWIMCYFCIWKGVKWTGKVVYFTSLFPYALLTILLIRGLTLPGA 259
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 23.0 bits (47), Expect = 1.8
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = +1
Query: 181 VWVVRGLCLARAVPWPIEWIAAVKLVPVACTREVLIVQTRVGGA 312
VW++ C+ + V W + + L P A +LI + GA
Sbjct: 269 VWIMCYFCIWKGVKWTGKVVYFTSLFPYALLTILLIRGLTLPGA 312
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 23.0 bits (47), Expect = 1.8
Identities = 21/60 (35%), Positives = 24/60 (40%), Gaps = 11/60 (18%)
Frame = -2
Query: 384 SLRYSRAHSCSTSR-----------LLLHGSRAYLRTANTSLNNKHLSRARNRDQLDRSN 238
S RYSR SCS R LH + L TS K SR+R R+Q N
Sbjct: 233 SSRYSRERSCSRDRNREYRKKDRRYEKLHNEKEKLLEERTS--RKRYSRSREREQKSYKN 290
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 23.0 bits (47), Expect = 1.8
Identities = 21/60 (35%), Positives = 24/60 (40%), Gaps = 11/60 (18%)
Frame = -2
Query: 384 SLRYSRAHSCSTSR-----------LLLHGSRAYLRTANTSLNNKHLSRARNRDQLDRSN 238
S RYSR SCS R LH + L TS K SR+R R+Q N
Sbjct: 228 SSRYSRERSCSRDRNREYKKKDRRYEKLHNEKKKLLEERTS--RKRYSRSREREQKSYKN 285
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 23.0 bits (47), Expect = 1.8
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -2
Query: 354 STSRLLLHGSRAYLRTANTSLNNKHLSRAR 265
ST L G+ +YL T NTS NN L R
Sbjct: 713 STQSLTTTGNVSYLTTNNTS-NNSQLQIPR 741
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic
acetylcholine receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 2.3
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +1
Query: 40 TKFNQTFFYFIFLLYLSCC 96
TK T+F+ +++Y S C
Sbjct: 33 TKLQPTYFHHTYIIYESLC 51
Score = 20.6 bits (41), Expect = 9.4
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -2
Query: 393 LQCSLRYSRAHSCSTSRLLLHGSR 322
L C LR SR T + +L G+R
Sbjct: 371 LPCLLRMSRPGKKITKKTILGGNR 394
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic
acetylcholine receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 2.3
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +1
Query: 40 TKFNQTFFYFIFLLYLSCC 96
TK T+F+ +++Y S C
Sbjct: 33 TKLQPTYFHHTYIIYESLC 51
Score = 20.6 bits (41), Expect = 9.4
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -2
Query: 393 LQCSLRYSRAHSCSTSRLLLHGSR 322
L C LR SR T + +L G+R
Sbjct: 371 LPCLLRMSRPGKKITKKTILGGNR 394
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.6 bits (46), Expect = 2.3
Identities = 21/60 (35%), Positives = 24/60 (40%), Gaps = 11/60 (18%)
Frame = -2
Query: 384 SLRYSRAHSCSTSR-----------LLLHGSRAYLRTANTSLNNKHLSRARNRDQLDRSN 238
S RYSR SCS R LH + L TS K SR+R R+Q N
Sbjct: 217 SSRYSRERSCSRDRNREYKEKDRRYEKLHNEKEKLLEERTS--RKRYSRSREREQNSYKN 274
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.6 bits (46), Expect = 2.3
Identities = 21/60 (35%), Positives = 24/60 (40%), Gaps = 11/60 (18%)
Frame = -2
Query: 384 SLRYSRAHSCSTSR-----------LLLHGSRAYLRTANTSLNNKHLSRARNRDQLDRSN 238
S RYSR SCS R LH + L TS K SR+R R+Q N
Sbjct: 217 SSRYSRERSCSRDRNREYRKKDRQYEKLHNEKEKLLEERTS--RKRYSRSREREQNSYKN 274
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 2.3
Identities = 21/60 (35%), Positives = 24/60 (40%), Gaps = 11/60 (18%)
Frame = -2
Query: 384 SLRYSRAHSCSTSR-----------LLLHGSRAYLRTANTSLNNKHLSRARNRDQLDRSN 238
S RYSR SCS R LH + L TS K SR+R R+Q N
Sbjct: 228 SSRYSRERSCSRDRNREYRKKDRQYEKLHNEKEKLLEERTS--RKRYSRSREREQNSYKN 285
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 22.6 bits (46), Expect = 2.3
Identities = 21/60 (35%), Positives = 24/60 (40%), Gaps = 11/60 (18%)
Frame = -2
Query: 384 SLRYSRAHSCSTSR-----------LLLHGSRAYLRTANTSLNNKHLSRARNRDQLDRSN 238
S RYSR SCS R LH + L TS K SR+R R+Q N
Sbjct: 228 SSRYSRERSCSRDRNREYKEKDRRYEKLHNEKEKLLEERTS--RKRYSRSREREQNSYKN 285
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.2 bits (45), Expect = 3.1
Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 12/72 (16%)
Frame = -2
Query: 384 SLRYSRAHSCSTSR-----------LLLHGSRAYLRTANTSLNNKHLSRARNRDQ-LDRS 241
S RYSR SCS R LH + L TS K SR+R R+Q L ++
Sbjct: 228 SSRYSRERSCSRDRNREYRKKDRRYEKLHNEKEKLLEERTSC--KRYSRSREREQKLYKN 285
Query: 240 NPFYRPGDRTGQ 205
YR T +
Sbjct: 286 EREYRKYGETSK 297
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 3.1
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 9/58 (15%)
Frame = -2
Query: 384 SLRYSRAHSCS--TSRLLLHGSRAYLRTANTS-------LNNKHLSRARNRDQLDRSN 238
S RYSR SCS +R R Y + N ++K SR+R R+Q N
Sbjct: 228 SSRYSRERSCSRDRNREYRKKDRQYEKLHNEKEKFLEERTSHKRYSRSREREQKSYKN 285
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 22.2 bits (45), Expect = 3.1
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = -2
Query: 309 TANTSLNNKHLSRARNRDQLDRSNPFYRPGDRTG 208
TA + N A N+ QL PF PG G
Sbjct: 1107 TAAAAATNIRPGTADNKPQLKPQKPFTSPGGIPG 1140
Score = 20.6 bits (41), Expect = 9.4
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -2
Query: 309 TANTSLNNKHLSRARNRDQ 253
T + +HL R R RDQ
Sbjct: 1075 TLEYKVKERHLMRPRKRDQ 1093
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 21.4 bits (43), Expect = 5.4
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +3
Query: 15 IYQNTPTRYKIQSNIFLFYF 74
IYQ +K+Q NI F F
Sbjct: 227 IYQRLSLSFKLQRNIGYFVF 246
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 5.4
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2
Query: 384 SLRYSRAHSCSTSR 343
S RYSR SCS R
Sbjct: 228 SSRYSRERSCSRDR 241
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 5.4
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2
Query: 384 SLRYSRAHSCSTSR 343
S RYSR SCS R
Sbjct: 228 SSRYSRERSCSRDR 241
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.4 bits (43), Expect = 5.4
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2
Query: 384 SLRYSRAHSCSTSR 343
S RYSR SCS R
Sbjct: 228 SSRYSRERSCSRDR 241
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.4 bits (43), Expect = 5.4
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2
Query: 384 SLRYSRAHSCSTSR 343
S RYSR SCS R
Sbjct: 228 SSRYSRERSCSRDR 241
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.4 bits (43), Expect = 5.4
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2
Query: 384 SLRYSRAHSCSTSR 343
S RYSR SCS R
Sbjct: 228 SSRYSRERSCSRDR 241
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.0 bits (42), Expect = 7.1
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -3
Query: 272 VHATGTNLTAAIHSIGQGTARARHRPLT 189
V G NL A ++ G++ RPL+
Sbjct: 1304 VTVPGNNLIATNTTVSSGSSEDHRRPLS 1331
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 20.6 bits (41), Expect = 9.4
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -2
Query: 393 LQCSLRYSRAHSCSTSRLLLHGSR 322
L C LR SR T + +L G+R
Sbjct: 303 LPCLLRMSRPGKKITKKTILGGNR 326
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 20.6 bits (41), Expect = 9.4
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -2
Query: 393 LQCSLRYSRAHSCSTSRLLLHGSR 322
L C LR SR T + +L G+R
Sbjct: 303 LPCLLRMSRPGKKITKKTILGGNR 326
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 20.6 bits (41), Expect = 9.4
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -2
Query: 393 LQCSLRYSRAHSCSTSRLLLHGSR 322
L C LR SR T + +L G+R
Sbjct: 303 LPCLLRMSRPGKKITKKTILGGNR 326
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 20.6 bits (41), Expect = 9.4
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -2
Query: 393 LQCSLRYSRAHSCSTSRLLLHGSR 322
L C LR SR T + +L G+R
Sbjct: 303 LPCLLRMSRPGKKITKKTILGGNR 326
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 20.6 bits (41), Expect = 9.4
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -2
Query: 393 LQCSLRYSRAHSCSTSRLLLHGSR 322
L C LR SR T + +L G+R
Sbjct: 303 LPCLLRMSRPGKKITKKTILGGNR 326
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 20.6 bits (41), Expect = 9.4
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -2
Query: 393 LQCSLRYSRAHSCSTSRLLLHGSR 322
L C LR SR T + +L G+R
Sbjct: 303 LPCLLRMSRPGKKITKKTILGGNR 326
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,221
Number of Sequences: 438
Number of extensions: 3171
Number of successful extensions: 40
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13618701
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -