BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmte11a24 (711 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_54665| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.70 SB_26814| Best HMM Match : 7tm_1 (HMM E-Value=0) 30 1.6 SB_52826| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1 SB_48676| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1 SB_33541| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8 SB_24073| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 3.3 SB_44879| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6 SB_189| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-35) 28 8.6 >SB_54665| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 573 Score = 31.5 bits (68), Expect = 0.70 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Frame = +3 Query: 303 PSMHTRLRYIGHCSLEPSVPKNRKGYTGFD-FPSSSDEEELSSGILKTRK 449 PS R + + +P VPK ++G G+D + SDEEE + K +K Sbjct: 422 PSQRKRSKGAKKGTKKPRVPKKKEGEEGYDPYDFESDEEETEEVVDKIKK 471 >SB_26814| Best HMM Match : 7tm_1 (HMM E-Value=0) Length = 594 Score = 30.3 bits (65), Expect = 1.6 Identities = 25/67 (37%), Positives = 30/67 (44%), Gaps = 5/67 (7%) Frame = +3 Query: 333 GHCSLEPSVPKNRKGYTGFDF---PSSSDEEELSSGILKTRKLSDKYKKKVR-YFDLLPG 500 G CS E +PK+R GYT D + S E S + LSDK K + Y L G Sbjct: 500 GDCSTERLIPKSRGGYTSLDSLARGAGSPEMRYSRSMDLGCALSDKDATKAKLYASLETG 559 Query: 501 -DIMFPT 518 D F T Sbjct: 560 IDTQFTT 566 >SB_52826| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2126 Score = 29.9 bits (64), Expect = 2.1 Identities = 19/79 (24%), Positives = 30/79 (37%) Frame = +3 Query: 132 RKLSKTTDCKDVSEIIEALTLDEEMAGKSTRQPSRXXXXXXXXXXXXHNKESCVPMVPSM 311 R+ K T C++V + L + K+ + P H C+ M S+ Sbjct: 589 RRYLKCTHCEEVFDHSNLLQIHM----KARKVPKNKANKAKQTLGGFHGPHVCIRMCKSL 644 Query: 312 HTRLRYIGHCSLEPSVPKN 368 H+ + HC L P KN Sbjct: 645 HSSAKIRLHCILNPVKAKN 663 >SB_48676| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 453 Score = 29.9 bits (64), Expect = 2.1 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = -3 Query: 397 GKSNPVYPFLFFGTEGSREQCPIYRSLV 314 GK+ P+YP+ EGS +Q +YR V Sbjct: 17 GKAEPMYPYSKLRREGSAQQTSLYRRTV 44 >SB_33541| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 453 Score = 29.5 bits (63), Expect = 2.8 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 4/58 (6%) Frame = +3 Query: 75 KFNKMKG-SVCKKCPPKTKSRKLSKTTDC---KDVSEIIEALTLDEEMAGKSTRQPSR 236 K+ K KG S C++ PP+ + ++ K DC KD+ I + L + A + +Q R Sbjct: 360 KWIKEKGDSSCQRLPPRYQCQQFVKDKDCIEEKDIKHIAKTCFLPVDDAADNIQQRKR 417 >SB_24073| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 794 Score = 24.6 bits (51), Expect(2) = 3.3 Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 1/23 (4%) Frame = +3 Query: 93 GSVCKKCPPKT-KSRKLSKTTDC 158 G+ C+KCPP T K + DC Sbjct: 209 GASCEKCPPGTYKEGSVGMCEDC 231 Score = 23.0 bits (47), Expect(2) = 3.3 Identities = 6/11 (54%), Positives = 10/11 (90%) Frame = +3 Query: 87 MKGSVCKKCPP 119 + G+VC++CPP Sbjct: 175 LAGTVCRECPP 185 >SB_44879| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 352 Score = 27.9 bits (59), Expect = 8.6 Identities = 13/35 (37%), Positives = 20/35 (57%) Frame = +3 Query: 291 VPMVPSMHTRLRYIGHCSLEPSVPKNRKGYTGFDF 395 V ++P+ + +C L S P++RK YTGF F Sbjct: 141 VVIIPAATVSKSALVYCKLHWSNPRHRKVYTGFLF 175 >SB_189| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-35) Length = 965 Score = 27.9 bits (59), Expect = 8.6 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 5/68 (7%) Frame = -2 Query: 416 LFI*R*WKIESSISFPVFWYRRLQRTMSNIP*S--RMHRRNHWNTAFFIMWR-FKF--FH 252 L+ R W+ + FW RR Q +S+ + H+RN F + + F F FH Sbjct: 756 LYARRRWRQTRELKHRAFWRRRRQPEVSSTSGRKWKRHQRNSSECVFSVSFEGFAFGDFH 815 Query: 251 FKLRRSRW 228 +R +W Sbjct: 816 SYIRAMKW 823 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 21,865,533 Number of Sequences: 59808 Number of extensions: 463087 Number of successful extensions: 1286 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 1214 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1282 length of database: 16,821,457 effective HSP length: 80 effective length of database: 12,036,817 effective search space used: 1877743452 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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