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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11a24
         (711 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_54665| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.70 
SB_26814| Best HMM Match : 7tm_1 (HMM E-Value=0)                       30   1.6  
SB_52826| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.1  
SB_48676| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.1  
SB_33541| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.8  
SB_24073| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   3.3  
SB_44879| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.6  
SB_189| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-35)           28   8.6  

>SB_54665| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 573

 Score = 31.5 bits (68), Expect = 0.70
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +3

Query: 303 PSMHTRLRYIGHCSLEPSVPKNRKGYTGFD-FPSSSDEEELSSGILKTRK 449
           PS   R +     + +P VPK ++G  G+D +   SDEEE    + K +K
Sbjct: 422 PSQRKRSKGAKKGTKKPRVPKKKEGEEGYDPYDFESDEEETEEVVDKIKK 471


>SB_26814| Best HMM Match : 7tm_1 (HMM E-Value=0)
          Length = 594

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 25/67 (37%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
 Frame = +3

Query: 333 GHCSLEPSVPKNRKGYTGFDF---PSSSDEEELSSGILKTRKLSDKYKKKVR-YFDLLPG 500
           G CS E  +PK+R GYT  D     + S E   S  +     LSDK   K + Y  L  G
Sbjct: 500 GDCSTERLIPKSRGGYTSLDSLARGAGSPEMRYSRSMDLGCALSDKDATKAKLYASLETG 559

Query: 501 -DIMFPT 518
            D  F T
Sbjct: 560 IDTQFTT 566


>SB_52826| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2126

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 19/79 (24%), Positives = 30/79 (37%)
 Frame = +3

Query: 132 RKLSKTTDCKDVSEIIEALTLDEEMAGKSTRQPSRXXXXXXXXXXXXHNKESCVPMVPSM 311
           R+  K T C++V +    L +      K+ + P              H    C+ M  S+
Sbjct: 589 RRYLKCTHCEEVFDHSNLLQIHM----KARKVPKNKANKAKQTLGGFHGPHVCIRMCKSL 644

Query: 312 HTRLRYIGHCSLEPSVPKN 368
           H+  +   HC L P   KN
Sbjct: 645 HSSAKIRLHCILNPVKAKN 663


>SB_48676| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 453

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -3

Query: 397 GKSNPVYPFLFFGTEGSREQCPIYRSLV 314
           GK+ P+YP+     EGS +Q  +YR  V
Sbjct: 17  GKAEPMYPYSKLRREGSAQQTSLYRRTV 44


>SB_33541| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 453

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
 Frame = +3

Query: 75  KFNKMKG-SVCKKCPPKTKSRKLSKTTDC---KDVSEIIEALTLDEEMAGKSTRQPSR 236
           K+ K KG S C++ PP+ + ++  K  DC   KD+  I +   L  + A  + +Q  R
Sbjct: 360 KWIKEKGDSSCQRLPPRYQCQQFVKDKDCIEEKDIKHIAKTCFLPVDDAADNIQQRKR 417


>SB_24073| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 794

 Score = 24.6 bits (51), Expect(2) = 3.3
 Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
 Frame = +3

Query: 93  GSVCKKCPPKT-KSRKLSKTTDC 158
           G+ C+KCPP T K   +    DC
Sbjct: 209 GASCEKCPPGTYKEGSVGMCEDC 231



 Score = 23.0 bits (47), Expect(2) = 3.3
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = +3

Query: 87  MKGSVCKKCPP 119
           + G+VC++CPP
Sbjct: 175 LAGTVCRECPP 185


>SB_44879| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 352

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +3

Query: 291 VPMVPSMHTRLRYIGHCSLEPSVPKNRKGYTGFDF 395
           V ++P+       + +C L  S P++RK YTGF F
Sbjct: 141 VVIIPAATVSKSALVYCKLHWSNPRHRKVYTGFLF 175


>SB_189| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-35)
          Length = 965

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
 Frame = -2

Query: 416 LFI*R*WKIESSISFPVFWYRRLQRTMSNIP*S--RMHRRNHWNTAFFIMWR-FKF--FH 252
           L+  R W+    +    FW RR Q  +S+      + H+RN     F + +  F F  FH
Sbjct: 756 LYARRRWRQTRELKHRAFWRRRRQPEVSSTSGRKWKRHQRNSSECVFSVSFEGFAFGDFH 815

Query: 251 FKLRRSRW 228
             +R  +W
Sbjct: 816 SYIRAMKW 823


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,865,533
Number of Sequences: 59808
Number of extensions: 463087
Number of successful extensions: 1286
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1282
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1877743452
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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