Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11a24
         (711 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    24   4.1  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    24   5.4  
AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein ...    23   7.2  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    23   7.2  
EF065522-1|ABK59322.1|  255|Anopheles gambiae beta carbonic anhy...    23   9.5  
AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           23   9.5  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    23   9.5  

>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = +3

Query: 363 KNRKGYTGFDFPSSSDEEELSSGILKTRKLSDKYKKKV 476
           K +K  TG + PSS +   L   + +TRK ++  ++++
Sbjct: 22  KQKKSATGTNLPSSPEMLILRQNLEETRKKNESLQEQL 59


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 10/48 (20%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = -1

Query: 405  KMMENRIQYILSCFLVQK-APENNVQYTVVSYASKEPLEHSFLYYVAV 265
            K   N I++ L    +++  P++ +QY V  + + +P E+     + +
Sbjct: 1140 KNQRNCIEFALKAKPIRRYIPKHRIQYKVWWFVTSQPFEYMIFVLIMI 1187


>AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein S26
           protein.
          Length = 114

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +3

Query: 297 MVPSMHTRLRYIGHCSLEPSVPKNRKGYT 383
           ++P ++ +L Y   C++   V +NR   T
Sbjct: 62  VLPKLYAKLHYCVSCAIHSKVVRNRSKET 90


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +3

Query: 402 SSDEEELSSGILKTRKLSDKYKKKVRYFDLLPGDIMFPTP 521
           SSD++EL+S I+   + + + +      DL P     PTP
Sbjct: 44  SSDDDELNSTIIAMPEPASECEAAEAAMDLEPPAAAQPTP 83


>EF065522-1|ABK59322.1|  255|Anopheles gambiae beta carbonic
           anhydrase protein.
          Length = 255

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 13/34 (38%), Positives = 15/34 (44%)
 Frame = +3

Query: 411 EEELSSGILKTRKLSDKYKKKVRYFDLLPGDIMF 512
           E   S G LK R  S        +FD+  GDI F
Sbjct: 194 ENVASYGFLKRRLESHDLHIHALWFDIYTGDIYF 227


>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
 Frame = +3

Query: 495 PGDIMFPTPAPIIKHSASDKSILNVPSPKTS-GEVIQAQRASVKPGECKPPLPSKSGYDL 671
           P     P   PI   +AS  S  +  S  +S  + +  + A+  P    PP P+ S Y+ 
Sbjct: 27  PSQPPVPMLVPIPSRTASTGSASSGHSGSSSLYDRVPREHATSSPYHA-PPSPANSHYEP 85

Query: 672 FKPHSGI 692
            + HS +
Sbjct: 86  MECHSAV 92


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 311 HRRNHWNTAFFIMWR 267
           H +NH   AF +MW+
Sbjct: 7   HNQNHCGAAFNLMWQ 21


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 753,880
Number of Sequences: 2352
Number of extensions: 15943
Number of successful extensions: 216
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 216
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)