Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11a24
         (711 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    25   0.93 
AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.          23   2.9  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    22   5.0  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            22   5.0  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    22   6.6  
DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    22   6.6  
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    22   6.6  
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    22   6.6  
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    22   6.6  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    22   6.6  
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    22   6.6  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    22   6.6  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    22   6.6  
AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex det...    21   8.7  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 24.6 bits (51), Expect = 0.93
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +3

Query: 474 VRYFDLLPGDIMFPTPAPIIKHSASDKSILN 566
           +RYF +L   +     AP +K  A+D+ +LN
Sbjct: 1   MRYFIILLALVALGVCAPNVKQRAADQDLLN 31


>AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.
          Length = 147

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +1

Query: 16  CKITCVKCKIRLN*HYRNHRNSIK*KAQFARN 111
           C  TC KCKI  N   +  R ++K K   A++
Sbjct: 2   CYCTCEKCKITAN-RQQVMRQNMKLKRHLAQD 32


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -3

Query: 394 KSNPVYPFLFFGTEGSREQCP 332
           KSN  Y F F G +G   Q P
Sbjct: 280 KSNDYYAFHFEGEKGPNSQGP 300


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = +1

Query: 598 FKLKEH-PLNQESVNLLYPQNLDMICSN 678
           F+ K+  P N  + N+L P   D ICSN
Sbjct: 349 FQSKDQGPPNDGNGNILSPSIHDNICSN 376


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 351 PSVPKNRKGYTGFDFPSSSDEE 416
           PS+ +++     FDFPS S E+
Sbjct: 42  PSIERDQMMAATFDFPSLSFED 63


>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +2

Query: 446 KTERQVQEKSAVFRFATGGYNVSDTGSNN 532
           +TER+  ++  +    +  YN S+  +NN
Sbjct: 70  RTERERSKEPKIISSLSNNYNYSNYNNNN 98


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +2

Query: 446 KTERQVQEKSAVFRFATGGYNVSDTGSNN 532
           +TER+  ++  +    +  YN S+  +NN
Sbjct: 70  RTERERSKEPKIISSLSNNYNYSNYNNNN 98


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +2

Query: 446 KTERQVQEKSAVFRFATGGYNVSDTGSNN 532
           +TER+  ++  +    +  YN S+  +NN
Sbjct: 70  RTERERSKEPKIISSLSNNYNYSNYNNNN 98


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +2

Query: 446 KTERQVQEKSAVFRFATGGYNVSDTGSNN 532
           +TER+  ++  +    +  YN S+  +NN
Sbjct: 70  RTERERSKEPKIISSLSNNYNYSNYNNNN 98


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +2

Query: 446 KTERQVQEKSAVFRFATGGYNVSDTGSNN 532
           +TER+  ++  +    +  YN S+  +NN
Sbjct: 70  RTERERSKEPKIISSLSNNYNYSNYNNNN 98


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +2

Query: 446 KTERQVQEKSAVFRFATGGYNVSDTGSNN 532
           +TER+  ++  +    +  YN S+  +NN
Sbjct: 70  RTERERSKEPKIISSLSNNYNYSNYNNNN 98


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 351 PSVPKNRKGYTGFDFPSSSDEE 416
           PS+ +++     FDFPS S E+
Sbjct: 42  PSIERDQMMAATFDFPSLSFED 63


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 351 PSVPKNRKGYTGFDFPSSSDEE 416
           PS+ +++     FDFPS S E+
Sbjct: 42  PSIERDQMMAATFDFPSLSFED 63


>AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = +3

Query: 405 SDEEELSSGILKTRKLSDKYKKKVRYFDLLPGDIMFPTPAPI 530
           S E ++ S +      ++ Y KK+ Y  +    I  P P PI
Sbjct: 309 SREPKIISSLSNNTIHNNNYNKKLYYNIINIEQIPVPVPVPI 350


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,502
Number of Sequences: 438
Number of extensions: 4911
Number of successful extensions: 20
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)