BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmte11a21 (633 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 07_03_1324 - 25825153-25825197,25825705-25825785,25825907-258259... 59 3e-09 06_01_0718 + 5233030-5233062,5233329-5233383,5233543-5233660,523... 58 6e-09 08_01_0066 - 455589-455687,455902-455976,456531-456677,457158-45... 55 4e-08 04_01_0026 - 354855-354876,355184-355248,355710-355817,356215-35... 51 7e-07 06_01_0067 + 561910-561987,562698-562759,564293-564338,564701-56... 51 9e-07 08_02_0034 - 11435678-11435702,11435787-11435816,11436364-114365... 48 5e-06 12_01_0813 + 7475591-7475693,7476972-7477117,7477205-7477324,747... 46 2e-05 11_03_0227 + 11934530-11934638,11937206-11937351,11937492-119376... 45 4e-05 02_05_0942 + 32970537-32970581,32971059-32971113,32971300-329714... 44 1e-04 03_01_0215 + 1696250-1696573,1697653-1697793,1698267-1698539,169... 44 1e-04 04_04_1543 - 34270578-34270718,34271069-34271341,34271782-342719... 42 5e-04 07_03_0057 + 12872946-12873152,12873371-12873421,12876335-128764... 36 0.020 08_01_0130 + 1040696-1041049,1042135-1042275,1042422-1042673,104... 32 0.33 11_06_0321 - 22341267-22342565 29 3.1 11_01_0438 - 3349506-3351239 29 3.1 06_03_0640 - 23059473-23060489,23060592-23060651,23063163-230632... 29 4.1 04_04_0750 + 27763841-27763972,27764311-27764485,27764908-277649... 29 4.1 08_02_0243 - 14708055-14708416,14708487-14709324,14709482-147103... 28 7.1 03_05_0807 + 27849637-27849823,27850002-27850294,27850736-278509... 28 7.1 01_01_0007 + 28940-28976,29146-29228,29885-29963,30258-30325,305... 28 7.1 11_03_0132 - 10505910-10505996,10507419-10507499,10509582-105105... 27 9.4 06_01_0859 - 6506029-6506133,6506255-6506319,6506461-6506539,650... 27 9.4 04_03_0376 + 15105874-15106230,15109207-15111573 27 9.4 >07_03_1324 - 25825153-25825197,25825705-25825785,25825907-25825967, 25826005-25826060,25826171-25826239,25826366-25826473, 25826555-25826635,25826795-25826951,25827060-25827177, 25827285-25827339,25827779-25827814 Length = 288 Score = 59.3 bits (137), Expect = 3e-09 Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 1/124 (0%) Frame = +1 Query: 232 RRLPVIFVNGVPGAGNQTVAETISDITGYNMIRPGELERVEATRDTVRGRMVAEKIRTLE 411 +++ V+FV G PG+G T I + G+ + G+L R E + G M+ I+ + Sbjct: 22 KKVTVVFVLGGPGSGKGTQCANIVEHFGFTHLSAGDLLRAEIKSGSENGTMIENMIKEGK 81 Query: 412 DLPEQLTVDLIKEEMLSQPEAKGFILVGFPRNSRMSDIFSRQVK-WPEKVVALEVDNEVA 588 +P ++T+ L+++ M+ K F++ GFPRN F K P V+ + E Sbjct: 82 IVPSEVTIKLLQDAMIKNENDK-FLIDGFPRNEENRAAFENVTKISPAFVLFFDCSEEEM 140 Query: 589 AARL 600 RL Sbjct: 141 ERRL 144 >06_01_0718 + 5233030-5233062,5233329-5233383,5233543-5233660, 5233746-5233902,5234033-5234113,5234213-5234320, 5234448-5234483 Length = 195 Score = 58.0 bits (134), Expect = 6e-09 Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 1/124 (0%) Frame = +1 Query: 232 RRLPVIFVNGVPGAGNQTVAETISDITGYNMIRPGELERVEATRDTVRGRMVAEKIRTLE 411 +++ +IFV G PG+G T I + G+ + GEL R E + G M+ I + Sbjct: 21 KKVKIIFVLGGPGSGKGTQCSNIVEHFGFIHLSAGELLRAEINSGSENGTMIDTIITEGK 80 Query: 412 DLPEQLTVDLIKEEMLSQPEAKGFILVGFPRNSRMSDIFSRQVK-WPEKVVALEVDNEVA 588 +P ++T+ L++E ++ K +I+ GFPRN +F + PE V+ + E Sbjct: 81 IVPSEITIKLLQEAIIKGGNDK-YIIDGFPRNEENRVVFESVISISPEFVLFFDCSEEEM 139 Query: 589 AARL 600 RL Sbjct: 140 ERRL 143 >08_01_0066 - 455589-455687,455902-455976,456531-456677,457158-457292, 457380-457508,457719-457814,458212-458403 Length = 290 Score = 55.2 bits (127), Expect = 4e-08 Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 2/120 (1%) Frame = +1 Query: 247 IFVNGVPGAGNQTVAETISDITGYNMIRPGELERVEATRDTVRGRMVAEKIRTLEDLPEQ 426 + + G P +G T E I G I G+L R E + G+ E + + +P++ Sbjct: 76 VMIAGAPASGKGTQCELIKSKYGLVHISAGDLLRAEIAAGSENGKRAKEFMEKGQLVPDE 135 Query: 427 LTVDLIKEEMLSQPEA--KGFILVGFPRNSRMSDIFSRQVKWPEKVVALEVDNEVAAARL 600 + V+++KE +L QP+A KG++L G+PR+ + P+ + L+V +E+ R+ Sbjct: 136 IVVNMVKERLL-QPDAQEKGWLLDGYPRSYSQAMALETLNIRPDIFILLDVPDELLVERV 194 >04_01_0026 - 354855-354876,355184-355248,355710-355817,356215-356295, 356729-356885,356990-357107,357485-357533,357806-357901 Length = 231 Score = 51.2 bits (117), Expect = 7e-07 Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 1/120 (0%) Frame = +1 Query: 244 VIFVNGVPGAGNQTVAETISDITGYNMIRPGELERVEATRDTVRGRMVAEKIRTLEDLPE 423 + FV G PG+G T I+ G+ + G+L R E + +G ++ I+ + +P Sbjct: 44 IAFVLGGPGSGKGTQCVRIASDFGFAHLSAGDLLRSEISTGGEKGELILNIIKEGKIVPS 103 Query: 424 QLTVDLIKEEMLSQPEAKGFILVGFPRNSRMSDIFSRQV-KWPEKVVALEVDNEVAAARL 600 ++TV+LI++ M S +AK ++ GFPR F R P+ V+ + + RL Sbjct: 104 EITVELIRKAMESS-DAKRVLIDGFPRCEENRIAFERITGTEPDLVIFFDCPEDEMVKRL 162 >06_01_0067 + 561910-561987,562698-562759,564293-564338,564701-564758, 564892-565009,565130-565286,565611-565718,565884-565955, 566058-566174,566309-566404 Length = 303 Score = 50.8 bits (116), Expect = 9e-07 Identities = 30/94 (31%), Positives = 48/94 (51%) Frame = +1 Query: 226 PVRRLPVIFVNGVPGAGNQTVAETISDITGYNMIRPGELERVEATRDTVRGRMVAEKIRT 405 P +++ ++FV G PG+G T I G+ + G+L R EA DT +G M+ + Sbjct: 71 PGKKITIVFVIGGPGSGKGTQCAKIVKQFGFTHLSAGDLLREEAKYDTEQGTMIKNLMNE 130 Query: 406 LEDLPEQLTVDLIKEEMLSQPEAKGFILVGFPRN 507 + + L V L+ + M K F++ GFPRN Sbjct: 131 GKLVSSDLIVKLLFKAMRESGNDK-FLVDGFPRN 163 >08_02_0034 - 11435678-11435702,11435787-11435816,11436364-11436501, 11436646-11436755,11436838-11436867,11437948-11437993, 11438453-11438622,11439156-11439221,11439299-11439378, 11440704-11440842,11440933-11441013,11441112-11441147, 11441414-11441539,11442084-11442179,11443615-11443689, 11444288-11444434,11445155-11445229,11445485-11445619, 11445706-11445834,11446161-11446292,11446395-11446598 Length = 689 Score = 48.4 bits (110), Expect = 5e-06 Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 2/112 (1%) Frame = +1 Query: 247 IFVNGVPGAGNQTVAETISDITGYNMIRPGELERVEATRDTVRGRMVAEKIRTLEDLPEQ 426 + ++G P +G T I + G I G+L R E + T G+ E + +P+Q Sbjct: 92 VMISGAPASGKGTQCRMIVEKYGLVHISTGDLLRAEVSSGTEIGKKAKEYMDNGMLVPDQ 151 Query: 427 LTVDLIKEEMLSQPEA--KGFILVGFPRNSRMSDIFSRQVKWPEKVVALEVD 576 + D++ LSQP+ +G++L G+PR+ + P+ + LE++ Sbjct: 152 VVTDMVVSR-LSQPDVRERGWLLDGYPRSYAQAQSLESMKIRPDIFIVLEIE 202 >12_01_0813 + 7475591-7475693,7476972-7477117,7477205-7477324, 7477445-7477612,7478252-7478341,7478941-7479039 Length = 241 Score = 46.0 bits (104), Expect = 2e-05 Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 4/125 (3%) Frame = +1 Query: 247 IFVNGVPGAGNQTVAETISDITGYNMIRPGELERVEATRDTVRGRMVAEKIRTLEDLPEQ 426 + + G PG G T + I D + G++ R T G E + E + + Sbjct: 31 VILVGPPGCGKGTQSPLIKDEFCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDD 90 Query: 427 LTVDLIKEEMLSQPEAKGFILVGFPRN----SRMSDIFSRQVKWPEKVVALEVDNEVAAA 594 L V +I E M KGFIL GFPR ++ ++ ++Q +KV+ +D+ + Sbjct: 91 LVVGIIDEAMKKTSCQKGFILDGFPRTVVQAQKLDEMLAKQGTKIDKVLNFAIDDAILEE 150 Query: 595 RLQNK 609 R+ + Sbjct: 151 RITGR 155 >11_03_0227 + 11934530-11934638,11937206-11937351,11937492-11937611, 11937731-11937898,11938534-11938623,11938920-11939018 Length = 243 Score = 45.2 bits (102), Expect = 4e-05 Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 4/132 (3%) Frame = +1 Query: 226 PVRRLPVIFVNGVPGAGNQTVAETISDITGYNMIRPGELERVEATRDTVRGRMVAEKIRT 405 P +RL ++ G PG+G T + I D + G++ R T G E + Sbjct: 29 PDKRLILV---GPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGVKAKEAMDK 85 Query: 406 LEDLPEQLTVDLIKEEMLSQPEAKGFILVGFPRN----SRMSDIFSRQVKWPEKVVALEV 573 E + + L V +I E M KGFIL GFPR ++ ++ ++ +KV+ + Sbjct: 86 GELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTVVQAQKLDEMLEKKGTKVDKVLNFAI 145 Query: 574 DNEVAAARLQNK 609 D+ + R+ + Sbjct: 146 DDSILEERITGR 157 >02_05_0942 + 32970537-32970581,32971059-32971113,32971300-32971417, 32971567-32971615,32971637-32971723,32971890-32971970, 32972074-32972181,32972432-32972503,32973218-32973250 Length = 215 Score = 44.0 bits (99), Expect = 1e-04 Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 1/124 (0%) Frame = +1 Query: 232 RRLPVIFVNGVPGAGNQTVAETISDITGYNMIRPGELERVEATRDTVRGRMVAEKIRTLE 411 +++ V+FV G PG+G T I + G+ + G+L R E + G M+ I+ + Sbjct: 25 KKVTVVFVLGGPGSGKGTQCANIVEHFGFIHLSAGDLLRAEIKSGSENGTMIENMIKEGK 84 Query: 412 DLPEQLTVDLIKEEMLSQPEAKGFILVGFPRNSRMSDIFSRQVK-WPEKVVALEVDNEVA 588 +P + E M+ K F++ GFPRN F K P V+ + E Sbjct: 85 IVPSE-------EAMIKSGNDK-FLIDGFPRNEENRAAFENVTKITPAFVLFFDCSEEEM 136 Query: 589 AARL 600 RL Sbjct: 137 ERRL 140 >03_01_0215 + 1696250-1696573,1697653-1697793,1698267-1698539, 1698755-1698814,1698890-1699033 Length = 313 Score = 43.6 bits (98), Expect = 1e-04 Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 2/100 (2%) Frame = +1 Query: 232 RRLPVIFVNGVPGAGNQTVAETISDITGYNMIRPGELERVEATRDTVRGRMVAEKIRTLE 411 R + +F+ G PG G T A +S + G I G+L R E +AE + + Sbjct: 59 RNVQWVFL-GCPGVGKGTYASRLSRLLGVPHIATGDLVRDELASSGPLSVQLAEIVNQGK 117 Query: 412 DLPEQLTVDLIKEEMLSQPE--AKGFILVGFPRNSRMSDI 525 + +++ ++L+ + + E GFIL GFPR + ++I Sbjct: 118 LVSDEIIINLLSKRLKKGEEQGESGFILDGFPRTVKQAEI 157 >04_04_1543 - 34270578-34270718,34271069-34271341,34271782-34271922, 34272365-34272667 Length = 285 Score = 41.5 bits (93), Expect = 5e-04 Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 2/124 (1%) Frame = +1 Query: 232 RRLPVIFVNGVPGAGNQTVAETISDITGYNMIRPGELERVEATRDTVRGRMVAEKIRTLE 411 RR+ +F+ G PG G T A +S + I G+L R +AE + + Sbjct: 52 RRVQWVFL-GCPGVGKGTYASRLSQMLRVPHIATGDLVRDALASPGPFSEQLAEIVNNGK 110 Query: 412 DLPEQLTVDLIKEEMLSQPE--AKGFILVGFPRNSRMSDIFSRQVKWPEKVVALEVDNEV 585 + +++ ++L+ + + E GFIL GFPR R ++I V + V+ L++ E Sbjct: 111 LVSDEIIINLLSKRLEEGAEKGELGFILDGFPRTIRQAEIL-EGVTDIDLVINLKLREEA 169 Query: 586 AAAR 597 A+ Sbjct: 170 LLAK 173 >07_03_0057 + 12872946-12873152,12873371-12873421,12876335-12876480, 12876567-12876756 Length = 197 Score = 36.3 bits (80), Expect = 0.020 Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 8/134 (5%) Frame = +1 Query: 232 RRLPVIFVNGVPGAGNQTVAETISDITGYNMIRPGELERVEATRD----TVRGRMVAEKI 399 R P + V G PG G T ++D I G+L R ++ D + ++ E + Sbjct: 10 RTRPNVLVTGTPGTGKTTTCSLLADAVDLRHINIGDLVREKSLHDGWDEELECHIINEDL 69 Query: 400 RTLEDLPEQ----LTVDLIKEEMLSQPEAKGFILVGFPRNSRMSDIFSRQVKWPEKVVAL 567 ++ LP+ TV + +E+ E +G ILV + D F +W + VV L Sbjct: 70 ESI-GLPQPSNPVCTVPQVCDELEDVME-EGGILVDY----HGCDFFPE--RWFDLVVVL 121 Query: 568 EVDNEVAAARLQNK 609 + DN + RL ++ Sbjct: 122 QTDNSILHDRLTSR 135 >08_01_0130 + 1040696-1041049,1042135-1042275,1042422-1042673, 1043797-1043904,1044289-1044593,1044720-1044841, 1044979-1045225,1045308-1045365,1045414-1045530, 1045718-1045753,1046492-1046554,1046958-1047047, 1047241-1047399,1047475-1047596,1048145-1048217, 1048307-1048375 Length = 771 Score = 32.3 bits (70), Expect = 0.33 Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 3/103 (2%) Frame = +1 Query: 241 PVIFVNGVPGAGNQTVAETISDITGYNMIRPGELERVEATRDTVRGRMVAEKIRTLEDLP 420 P V G PG A ++++ I G L R E + + + +A + + +P Sbjct: 71 PQWVVMGRPGPQKHAHAARLAEVLAVPYISMGTLVRQELSPASSLYKKIANSVNEGKLVP 130 Query: 421 EQLTVDLIK---EEMLSQPEAKGFILVGFPRNSRMSDIFSRQV 540 E + L+ EE ++ E GFIL G PR ++I V Sbjct: 131 EDIIFGLLTKRLEEGYNKGET-GFILDGIPRTHMQAEILDEIV 172 >11_06_0321 - 22341267-22342565 Length = 432 Score = 29.1 bits (62), Expect = 3.1 Identities = 12/29 (41%), Positives = 15/29 (51%) Frame = -2 Query: 299 IVSATVWFPAPGTPLTKITGSRRTGDMSY 213 ++ W P G P KI GSRR+G Y Sbjct: 397 VIEICSWIPNNGQPDWKIIGSRRSGSFVY 425 >11_01_0438 - 3349506-3351239 Length = 577 Score = 29.1 bits (62), Expect = 3.1 Identities = 15/29 (51%), Positives = 19/29 (65%) Frame = +1 Query: 181 FSKDIEVVEDLYDMSPVRRLPVIFVNGVP 267 F+ D VV D Y+ +P+RRLP I GVP Sbjct: 252 FANDRAVVFDPYNRAPLRRLPAI-PGGVP 279 >06_03_0640 - 23059473-23060489,23060592-23060651,23063163-23063283, 23063476-23065496 Length = 1072 Score = 28.7 bits (61), Expect = 4.1 Identities = 14/54 (25%), Positives = 29/54 (53%) Frame = +1 Query: 307 ITGYNMIRPGELERVEATRDTVRGRMVAEKIRTLEDLPEQLTVDLIKEEMLSQP 468 +TG N + P LE E + + ++ + ++ E+LP +++D E + S+P Sbjct: 481 VTGGNNM-PSNLEHTENEKTDLMQELMVDDLKDTENLPPIMSLDEFMETLDSEP 533 >04_04_0750 + 27763841-27763972,27764311-27764485,27764908-27764998, 27764999-27765133,27765683-27765742,27765876-27765951, 27766037-27766174,27766509-27767373,27767763-27767865, 27768101-27768176,27768329-27768393,27768463-27768493, 27768618-27768725 Length = 684 Score = 28.7 bits (61), Expect = 4.1 Identities = 21/85 (24%), Positives = 45/85 (52%), Gaps = 3/85 (3%) Frame = +1 Query: 241 PVIFVNGVPGAGNQTVAETISDITGYNMIRPGELERVEATRDTVRGRMVAEK--IRTLED 414 P+ + V GN+ + T+ D+ G ++ + + T T G+ ++E+ ++T+E Sbjct: 336 PIDYARVVQKIGNE-MDLTLVDLEG--LLPSAIIMVISVTASTTSGKPLSEENLVKTIEA 392 Query: 415 LPEQLTVDLIKEEMLSQPEAK-GFI 486 LT+D K+++L E++ G+I Sbjct: 393 CERALTLDAAKKKVLEFVESRMGYI 417 >08_02_0243 - 14708055-14708416,14708487-14709324,14709482-14710323, 14710466-14710520,14711535-14711549,14713030-14713033, 14713340-14713424,14714045-14714084 Length = 746 Score = 27.9 bits (59), Expect = 7.1 Identities = 10/28 (35%), Positives = 21/28 (75%), Gaps = 1/28 (3%) Frame = +1 Query: 190 DIEVVEDLYD-MSPVRRLPVIFVNGVPG 270 +++ +E++Y+ + P R+L IF++G PG Sbjct: 694 EVKNIEEIYNKLCPSRKLQYIFIDGFPG 721 >03_05_0807 + 27849637-27849823,27850002-27850294,27850736-27850973, 27851075-27851410,27851496-27851581,27851678-27851785, 27851878-27852185,27852265-27852528,27852610-27853381 Length = 863 Score = 27.9 bits (59), Expect = 7.1 Identities = 16/48 (33%), Positives = 22/48 (45%) Frame = +1 Query: 307 ITGYNMIRPGELERVEATRDTVRGRMVAEKIRTLEDLPEQLTVDLIKE 450 I Y + PGE + E RG + I LE+L + V LIK+ Sbjct: 285 IRTYVDLTPGEFDSFEDILKLYRGGLKLPSIPALEELRKSFPVQLIKD 332 >01_01_0007 + 28940-28976,29146-29228,29885-29963,30258-30325, 30505-30606,31377-31466,31542-31616,31712-31744, 32277-32330,32400-32471,32543-32617,32975-33124 Length = 305 Score = 27.9 bits (59), Expect = 7.1 Identities = 13/42 (30%), Positives = 22/42 (52%) Frame = +1 Query: 205 EDLYDMSPVRRLPVIFVNGVPGAGNQTVAETISDITGYNMIR 330 EDL +S ++ ++ V+G PG G + ++ GY IR Sbjct: 46 EDLQLLSRSNQVAIVTVDGRPGPGAYGITAVVAGAIGYLYIR 87 >11_03_0132 - 10505910-10505996,10507419-10507499,10509582-10510528, 10510645-10510742,10511273-10511442,10511551-10511832, 10514544-10514936 Length = 685 Score = 27.5 bits (58), Expect = 9.4 Identities = 11/22 (50%), Positives = 15/22 (68%) Frame = -1 Query: 396 LFGDHSPSDRVPCSLDSFQFAR 331 LFGDH+PS R+P + +F R Sbjct: 564 LFGDHNPSGRLPVTWYPEEFTR 585 >06_01_0859 - 6506029-6506133,6506255-6506319,6506461-6506539, 6506764-6506893,6507231-6507396,6507515-6507569, 6507693-6507739,6508416-6508614 Length = 281 Score = 27.5 bits (58), Expect = 9.4 Identities = 10/32 (31%), Positives = 21/32 (65%) Frame = +1 Query: 247 IFVNGVPGAGNQTVAETISDITGYNMIRPGEL 342 I++ G+ G+G TVA+ ++++ GY+ +L Sbjct: 97 IYLVGMMGSGKSTVAKILAEVLGYSFFDSDKL 128 >04_03_0376 + 15105874-15106230,15109207-15111573 Length = 907 Score = 27.5 bits (58), Expect = 9.4 Identities = 12/38 (31%), Positives = 22/38 (57%) Frame = +1 Query: 193 IEVVEDLYDMSPVRRLPVIFVNGVPGAGNQTVAETISD 306 I ++ D S R VI ++G+PG+G T+A+ + + Sbjct: 201 ISMLRDENQSSADRCFSVIGIHGIPGSGKTTLAQYVCE 238 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,983,441 Number of Sequences: 37544 Number of extensions: 323943 Number of successful extensions: 988 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 961 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 985 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1549385732 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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