Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11a21
(633 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50045-3|CAA90364.1| 210|Caenorhabditis elegans Hypothetical pr... 64 1e-10
AF304123-1|AAG50236.1| 210|Caenorhabditis elegans adenylate kin... 64 1e-10
Z92827-3|CAB07328.1| 191|Caenorhabditis elegans Hypothetical pr... 59 2e-09
Z69302-1|CAA93264.1| 191|Caenorhabditis elegans Hypothetical pr... 58 5e-09
Z68105-5|CAA92123.2| 729|Caenorhabditis elegans Hypothetical pr... 52 5e-07
AL009066-1|CAA15625.2| 729|Caenorhabditis elegans Hypothetical ... 52 5e-07
L23651-13|AAA27957.3| 251|Caenorhabditis elegans Hypothetical p... 45 4e-05
Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical pr... 31 0.52
L16559-5|AAA27932.2| 365|Caenorhabditis elegans Hypothetical pr... 29 3.7
U58735-4|AAC48144.1| 479|Caenorhabditis elegans Hypothetical pr... 28 4.8
AL132862-13|CAB60543.1| 385|Caenorhabditis elegans Hypothetical... 28 4.8
>Z50045-3|CAA90364.1| 210|Caenorhabditis elegans Hypothetical
protein F38B2.4 protein.
Length = 210
Score = 63.7 bits (148), Expect = 1e-10
Identities = 37/134 (27%), Positives = 66/134 (49%), Gaps = 2/134 (1%)
Frame = +1
Query: 238 LPVIFVNGVPGAGNQTVAETISDITGYNMIRPGELERVEATRDTVRGRMVAEKIRTLEDL 417
+P+ F+ G PG+G T + I G + G+L R E + RG + + + +
Sbjct: 20 VPIFFIVGGPGSGKGTQCDKIVAKYGLTHLSSGDLLRDEVKSGSPRGAQLTAIMESGALV 79
Query: 418 PEQLTVDLIKEEMLSQPE--AKGFILVGFPRNSRMSDIFSRQVKWPEKVVALEVDNEVAA 591
P ++ +DL+KE ML E +KGF++ G+PR F +++ + V+ +V E
Sbjct: 80 PLEVVLDLVKEAMLKAIEKGSKGFLIDGYPREVAQGQQFESEIQEAKLVLFFDVAEETLV 139
Query: 592 ARLQNKLSELGRPE 633
RL ++ GR +
Sbjct: 140 KRLLHRAQTSGRAD 153
>AF304123-1|AAG50236.1| 210|Caenorhabditis elegans adenylate kinase
1 protein.
Length = 210
Score = 63.7 bits (148), Expect = 1e-10
Identities = 37/134 (27%), Positives = 66/134 (49%), Gaps = 2/134 (1%)
Frame = +1
Query: 238 LPVIFVNGVPGAGNQTVAETISDITGYNMIRPGELERVEATRDTVRGRMVAEKIRTLEDL 417
+P+ F+ G PG+G T + I G + G+L R E + RG + + + +
Sbjct: 20 VPIFFIVGGPGSGKGTQCDKIVAKYGLTHLSSGDLLRDEVKSGSPRGAQLTAIMESGALV 79
Query: 418 PEQLTVDLIKEEMLSQPE--AKGFILVGFPRNSRMSDIFSRQVKWPEKVVALEVDNEVAA 591
P ++ +DL+KE ML E +KGF++ G+PR F +++ + V+ +V E
Sbjct: 80 PLEVVLDLVKEAMLKAIEKGSKGFLIDGYPREVAQGQQFESEIQEAKLVLFFDVAEETLV 139
Query: 592 ARLQNKLSELGRPE 633
RL ++ GR +
Sbjct: 140 KRLLHRAQTSGRAD 153
>Z92827-3|CAB07328.1| 191|Caenorhabditis elegans Hypothetical
protein C29F7.3 protein.
Length = 191
Score = 59.3 bits (137), Expect = 2e-09
Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Frame = +1
Query: 244 VIFVNGVPGAGNQTVAETISDITGYNMIRPGELERVEATR-DTVRGRMVAEKIRTLEDLP 420
V+FV G PG+G T+ I + GY + G+L R E R + G ++ I+ +P
Sbjct: 4 VVFVLGPPGSGKGTICTQIHENLGYVHLSAGDLLRAERERAGSEYGALIEGHIKNGSIVP 63
Query: 421 EQLTVDLIKEEMLSQPEAKGFILVGFPRN 507
++T L++ M++ +A GF++ GFPRN
Sbjct: 64 VEITCALLENAMIASKDANGFLIDGFPRN 92
>Z69302-1|CAA93264.1| 191|Caenorhabditis elegans Hypothetical
protein F40F8.1 protein.
Length = 191
Score = 58.0 bits (134), Expect = 5e-09
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Frame = +1
Query: 244 VIFVNGVPGAGNQTVAETISDITGYNMIRPGELERVEATRDTVR-GRMVAEKIRTLEDLP 420
V+FV G PG+G T+ I + Y + G+L R E R+ G ++ I+ +P
Sbjct: 4 VVFVLGPPGSGKGTICAKIQENLNYVHLSAGDLLRAERQREGSEFGALIESHIKNGSIVP 63
Query: 421 EQLTVDLIKEEMLSQPEAKGFILVGFPRN 507
++T L++ M + +AKGF++ GFPRN
Sbjct: 64 VEITCSLLENAMKACGDAKGFLVDGFPRN 92
>Z68105-5|CAA92123.2| 729|Caenorhabditis elegans Hypothetical
protein F13E6.2 protein.
Length = 729
Score = 51.6 bits (118), Expect = 5e-07
Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 6/137 (4%)
Frame = +1
Query: 217 DMSPVRRLPVIFVNGVPGAGNQT----VAETISDITGYNMIRPGELERVEAT-RDTV-RG 378
+++ + +P+I G PG G VA++++D ++ P + +D
Sbjct: 162 EVARIPDVPIILFMGGPGGGKTRHAARVADSLADNGLVHICMPDIIRTALGKYKDKYPEW 221
Query: 379 RMVAEKIRTLEDLPEQLTVDLIKEEMLSQPEAKGFILVGFPRNSRMSDIFSRQVKWPEKV 558
+ E E +P QL + L+K EM P+A GF L G+PR +R + F RQVK
Sbjct: 222 KEANEHYIRGELIPNQLALTLLKAEMGRHPDAMGFFLEGYPREARQVEDFERQVKSVNMA 281
Query: 559 VALEVDNEVAAARLQNK 609
+ L+ D ++ +
Sbjct: 282 LILDYDERTLREHMERR 298
Score = 37.5 bits (83), Expect = 0.008
Identities = 20/93 (21%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Frame = +1
Query: 241 PVIFVNGVPGAGNQTVAETISD-ITGYNMIRPGEL--ERVEATRDTVRGRMVAEKIRTLE 411
PVI V G PG+ ++ I+ G+ M+ G++ +++ ++ V++K+ +
Sbjct: 514 PVILVLGAPGSQKNDISRRIAQKYDGFTMLSMGDILRKKINNEKNDEMWDKVSKKMNNGD 573
Query: 412 DLPEQLTVDLIKEEMLSQPEAK-GFILVGFPRN 507
+P ++ ++ EE+ S+ + G+++ G+P++
Sbjct: 574 PIPTKMCRTVLYEELHSRGTSNWGYVIEGYPKS 606
>AL009066-1|CAA15625.2| 729|Caenorhabditis elegans Hypothetical
protein F13E6.2 protein.
Length = 729
Score = 51.6 bits (118), Expect = 5e-07
Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 6/137 (4%)
Frame = +1
Query: 217 DMSPVRRLPVIFVNGVPGAGNQT----VAETISDITGYNMIRPGELERVEAT-RDTV-RG 378
+++ + +P+I G PG G VA++++D ++ P + +D
Sbjct: 162 EVARIPDVPIILFMGGPGGGKTRHAARVADSLADNGLVHICMPDIIRTALGKYKDKYPEW 221
Query: 379 RMVAEKIRTLEDLPEQLTVDLIKEEMLSQPEAKGFILVGFPRNSRMSDIFSRQVKWPEKV 558
+ E E +P QL + L+K EM P+A GF L G+PR +R + F RQVK
Sbjct: 222 KEANEHYIRGELIPNQLALTLLKAEMGRHPDAMGFFLEGYPREARQVEDFERQVKSVNMA 281
Query: 559 VALEVDNEVAAARLQNK 609
+ L+ D ++ +
Sbjct: 282 LILDYDERTLREHMERR 298
Score = 37.5 bits (83), Expect = 0.008
Identities = 20/93 (21%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Frame = +1
Query: 241 PVIFVNGVPGAGNQTVAETISD-ITGYNMIRPGEL--ERVEATRDTVRGRMVAEKIRTLE 411
PVI V G PG+ ++ I+ G+ M+ G++ +++ ++ V++K+ +
Sbjct: 514 PVILVLGAPGSQKNDISRRIAQKYDGFTMLSMGDILRKKINNEKNDEMWDKVSKKMNNGD 573
Query: 412 DLPEQLTVDLIKEEMLSQPEAK-GFILVGFPRN 507
+P ++ ++ EE+ S+ + G+++ G+P++
Sbjct: 574 PIPTKMCRTVLYEELHSRGTSNWGYVIEGYPKS 606
>L23651-13|AAA27957.3| 251|Caenorhabditis elegans Hypothetical
protein C29E4.8 protein.
Length = 251
Score = 45.2 bits (102), Expect = 4e-05
Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 5/132 (3%)
Frame = +1
Query: 232 RRLPVIFVNGVPGAGNQTVAETISDITGYNMIRPGELERVEATRDTVRGRMVAEKIRTLE 411
R + IF+ G PG+G T A + + G+L R E + G+ + + +
Sbjct: 25 RGIRAIFI-GPPGSGKGTQAPAFAQKYFSCHLATGDLLRAEVASGSEFGKELKATMDAGK 83
Query: 412 DLPEQLTVDLIKEEMLSQPEAK-GFILVGFPRNS----RMSDIFSRQVKWPEKVVALEVD 576
+ +++ LI E+ L +PE K GFIL GFPR S ++ +I R+ + VV +
Sbjct: 84 LVSDEVVCKLI-EQKLEKPECKYGFILDGFPRTSGQAEKLDEILERRKTPLDTVVEFNIA 142
Query: 577 NEVAAARLQNKL 612
+++ R+ +L
Sbjct: 143 DDLLVRRITGRL 154
>Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical
protein K04G2.3 protein.
Length = 724
Score = 31.5 bits (68), Expect = 0.52
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = +1
Query: 172 GCFFSKDIEVVEDLYDMSPVRRLPV---IFVNGVPGAGNQTVAETISDITGYNMIRPGEL 342
GCF +K +V+ED Y +SPVR+ + + G+PG+G + + ++ + + G
Sbjct: 250 GCFTAK--QVLED-YVISPVRQKESPCSVLIWGLPGSGKTLLLKEVALVLSGSTTYIGSC 306
Query: 343 ERVEATRDTVRGRMVAEKIRTLE 411
E + G +V + LE
Sbjct: 307 EELMELNGVTTGNIVIVDVNELE 329
>L16559-5|AAA27932.2| 365|Caenorhabditis elegans Hypothetical
protein C06E1.7 protein.
Length = 365
Score = 28.7 bits (61), Expect = 3.7
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = -1
Query: 366 VPCSLDSFQ-FARPDHVVACDVGYRLRDCLV--PGSGNAVNKDHRQPTNR*HVIQVFYHF 196
+P LD FQ F P H A V + C+ P N ++ ++ T H Q + +F
Sbjct: 115 LPGLLDEFQIFEYPVHNKATKVPLSEKCCIFDNPDKFNNISSEYLHLTG--HFYQSWKYF 172
Query: 195 DIFREKATHFI 163
D ++EK F+
Sbjct: 173 DKYKEKVQSFV 183
>U58735-4|AAC48144.1| 479|Caenorhabditis elegans Hypothetical
protein F20B4.3 protein.
Length = 479
Score = 28.3 bits (60), Expect = 4.8
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Frame = +1
Query: 340 LERVEATRDTVRGRMVAEKIRTLE---DLPEQLTVDLIKEEMLSQ 465
LE V DT RG + E+ RTL+ PEQ+ +DLI ++L Q
Sbjct: 330 LESVFGKGDTQRGLL--EQFRTLKFNHSNPEQMKLDLISHQLLVQ 372
>AL132862-13|CAB60543.1| 385|Caenorhabditis elegans Hypothetical
protein Y73F8A.18 protein.
Length = 385
Score = 28.3 bits (60), Expect = 4.8
Identities = 19/75 (25%), Positives = 40/75 (53%)
Frame = -2
Query: 239 SRRTGDMSYKSSTTSISFEKKQPIL**VLSSANT*INNTFIKSLRYIGKIA*YKYVFN*N 60
SR GD+ S+++ + + + I ++ S N +F+++L+Y+ ++A K
Sbjct: 221 SRVLGDVEVGSNSSLENMKSIELIFGSLIISGTQLTNVSFLENLKYVAQLAEAKSAIIVE 280
Query: 59 N*INLIDV*FQILKQ 15
N NL+++ F LK+
Sbjct: 281 NNPNLLNISFPKLKR 295
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,768,422
Number of Sequences: 27780
Number of extensions: 280284
Number of successful extensions: 911
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 905
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -