Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11a18
(684 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 42 8e-05
SPAC4G9.08c |rpc2||DNA-directed RNA polymerase III complex subun... 32 0.067
SPBC713.06 |adl1|lig3|DNA ligase |Schizosaccharomyces pombe|chr ... 29 0.83
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 29 0.83
SPAPB17E12.09 |||sequence orphan|Schizosaccharomyces pombe|chr 1... 28 1.4
SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5 |Schizo... 28 1.4
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 27 1.9
SPBC32F12.10 |||phosphoglucomutase |Schizosaccharomyces pombe|ch... 27 2.5
SPAC16C9.06c |upf1||ATP-dependent RNA helicase Upf1|Schizosaccha... 27 2.5
SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces pomb... 27 3.3
SPAC4H3.11c |ppc89|mug127|spindle pole body protein Ppc89|Schizo... 27 3.3
SPBC16G5.06 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 3.3
SPCC736.15 |||protein kinase inhibitor |Schizosaccharomyces pomb... 26 5.8
SPAC1805.15c |pub2||ubiquitin-protein ligase Pub2|Schizosaccharo... 25 7.7
SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual 25 7.7
SPBC106.01 |mph1|SPBC1271.16c, SPBC243.01|dual specificity prote... 25 7.7
SPCC1322.12c |bub1||serine/threonine protein kinase Bub1|Schizos... 25 7.7
SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces ... 25 7.7
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 41.9 bits (94), Expect = 8e-05
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Frame = +3
Query: 468 IRAAYEDVRSDTTPTEWAVFKFE---GARIVCSARGSDFTEFRTQFSDDERAFGYLRLQM 638
IR YE V S WA+F +E G + A G+D EF +F ++ FG+LR++
Sbjct: 14 IRNVYEKVLSGADDCSWAIFGYEKGQGNILKVVASGNDNDEFLDEFDENAVLFGFLRVK- 72
Query: 639 GDEMSKRKKFMFMTW 683
D + KF+ + W
Sbjct: 73 -DVNTGLNKFVLVCW 86
>SPAC4G9.08c |rpc2||DNA-directed RNA polymerase III complex subunit
Rpc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1165
Score = 32.3 bits (70), Expect = 0.067
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Frame = +3
Query: 246 GISDKIVLLEEGATDRRKLKADIQVLKTRIDDLYAIVKDGKDSGSTDIQDVESC--HSGF 419
GI I++ G R + I++L ++ L ++ G G T ++D G+
Sbjct: 953 GICPDIIMNPHGFPSRMTVGKMIELLSGKVGVLRGTLEYGTCFGGTKVEDASRILVEHGY 1012
Query: 420 SNSSKVTMTTGLDRETIRA 476
+ S K +T+G+ ET+ A
Sbjct: 1013 NYSGKDMLTSGITGETLEA 1031
>SPBC713.06 |adl1|lig3|DNA ligase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 774
Score = 28.7 bits (61), Expect = 0.83
Identities = 15/68 (22%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +3
Query: 273 EEGATDRRKLKADIQVLKTRID-DLYAIVKDGKDSGSTDIQDVESCHSGFSNSSKVTMTT 449
E AT KL D+ + + D + +VK+ D ++ E C + F ++ V +
Sbjct: 71 ENQATAPEKLPKDVIIPEEEYHTDTFNVVKESNDKPKENLVTSEECKASFFSTDSVNKDS 130
Query: 450 GLDRETIR 473
+D + ++
Sbjct: 131 TIDYDALQ 138
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 28.7 bits (61), Expect = 0.83
Identities = 36/125 (28%), Positives = 59/125 (47%)
Frame = -3
Query: 607 SSSENCVRNSVKSLPLAEHTIRAPSNLNTAHSVGVVSDLTSS*AALIVSRSRPVVMVTFE 428
S+S + +S+ S P+ + + S++ T+ S SD +SS + S + TF
Sbjct: 520 STSSSTPSSSIISSPMTS-VLSSSSSIPTSSS----SDFSSSITTISSGISSSSIPSTFS 574
Query: 427 ELENPE*QDSTSWISVEPESLPSLTIAYKSSILVFRT*MSAFSLRLSVAPSSSKTILSEI 248
+ + STS P S SL+I+ S+ F + ++ +S + SSS TILS
Sbjct: 575 SVSSIL-SSSTS----SPSST-SLSISSSSTSSTFSSASTSSPSSISSSISSSSTILSSP 628
Query: 247 PPRTS 233
P TS
Sbjct: 629 TPSTS 633
>SPAPB17E12.09 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 203
Score = 27.9 bits (59), Expect = 1.4
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 228 LREVLGGISDKIVLLEEGATDRRKLKADIQVLKTRIDD 341
LRE+ G KI+ LEE D + ++Q+ T+I D
Sbjct: 142 LREISGNHKSKILKLEEELNDLKHSMKEMQLYMTKIID 179
>SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1065
Score = 27.9 bits (59), Expect = 1.4
Identities = 24/116 (20%), Positives = 49/116 (42%), Gaps = 2/116 (1%)
Frame = +3
Query: 147 QDQIDKLTDAQTLIITKFDNLMANMNELREVLG--GISDKIVLLEEGATDRRKLKADIQV 320
Q ++ L D Q + K N+ +++ + G++ +V+ E +L+AD +
Sbjct: 193 QSTLNSLKDRQQAL-EKEVNIFKEREKIKSYIEMLGLAKMLVIYREKTNVFNQLRADKKK 251
Query: 321 LKTRIDDLYAIVKDGKDSGSTDIQDVESCHSGFSNSSKVTMTTGLDRETIRAAYED 488
LK + DL + D G D++ F++ S +M RA++ +
Sbjct: 252 LKKDLKDLVEEFQPILDKGEELRSDLKLKDDTFNDYSSASMELNTSNLRARASFSN 307
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 27.5 bits (58), Expect = 1.9
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -2
Query: 317 LNVCLQFTSIGRSFLQQNDFIRNTTENLTQ 228
L + F G+ +LQ DF+R TE + +
Sbjct: 76 LKILRDFDKTGKGYLQMEDFVRVMTEKIVE 105
>SPBC32F12.10 |||phosphoglucomutase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 554
Score = 27.1 bits (57), Expect = 2.5
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = -2
Query: 431 RRIRESRMTGFDILDIGRTGVLAVFDYSVQIIDP---SLQDLNVCLQFTSIGRSFLQQN- 264
+ I E +M LD+ TGV +V++IDP +Q + F I RSFL +N
Sbjct: 148 KTISEYKMVKIPPLDLTTTGVRRYGPLTVEVIDPVKDYVQLMKEIFDFDLI-RSFLSKNP 206
Query: 263 DF 258
DF
Sbjct: 207 DF 208
>SPAC16C9.06c |upf1||ATP-dependent RNA helicase
Upf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 27.1 bits (57), Expect = 2.5
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 513 EWAVFKFEGARIVCSARGSDFTEFRTQFSDDERAF 617
EW VF R + +DF +FR+Q DDE F
Sbjct: 888 EWNVFAQYKRR---ESNATDFEDFRSQVGDDESKF 919
>SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 952
Score = 26.6 bits (56), Expect = 3.3
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 141 VFQDQIDKLTDAQTLIITKFDNLMANMNELREVLGGISDKIVLLEE 278
++Q+QI + K + LM +NEL+ L S K++ L+E
Sbjct: 428 LYQEQIQSSIKDMENVFRKNEYLMEELNELKNNLEVESSKVLRLDE 473
>SPAC4H3.11c |ppc89|mug127|spindle pole body protein
Ppc89|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 26.6 bits (56), Expect = 3.3
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +3
Query: 159 DKLTDAQTLIITKFDNLMANMNELREVLGGISDKIVLLEEGATDRRKLKA 308
++L +A L+ KF+ L NE + + DK+ LL + A +R K +A
Sbjct: 287 EQLFNAHQLLEKKFEILKRERNECNAKIDELQDKLELLTD-AYNREKRRA 335
>SPBC16G5.06 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 230
Score = 26.6 bits (56), Expect = 3.3
Identities = 26/113 (23%), Positives = 49/113 (43%)
Frame = -3
Query: 676 MNINFLRLDISSPICNLRYPNARSSSENCVRNSVKSLPLAEHTIRAPSNLNTAHSVGVVS 497
++IN+ L P R + SSS + + S S P + +PS+ +T+ S G
Sbjct: 34 VSINYGTLSTVFPSLYRRASTSSSSSSSSISTSHDSQPSTSSS--SPSSTSTSSSSG--- 88
Query: 496 DLTSS*AALIVSRSRPVVMVTFEELENPE*QDSTSWISVEPESLPSLTIAYKS 338
TS A VS S ++ + + + T +++++P + + Y S
Sbjct: 89 --TSVITASDVSASNEIISSSTNNSIHQQVSVVTEYVTIQPTTYVTTIFQYTS 139
>SPCC736.15 |||protein kinase inhibitor |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 351
Score = 25.8 bits (54), Expect = 5.8
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = -3
Query: 307 AFSLRLSVAPSSSKTILSEIPPRTSRNSFMFAIKLSNLVMIS 182
A+SLR S AP++S+ +L+ PP +S S LS+ + I+
Sbjct: 5 AYSLRNSRAPTASQ-LLNPPPPSSSTRSGRLFAPLSHTMRIN 45
>SPAC1805.15c |pub2||ubiquitin-protein ligase
Pub2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 671
Score = 25.4 bits (53), Expect = 7.7
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +1
Query: 589 RSSLMMNAHSDTSGCRWETR 648
+S + + D SGC WETR
Sbjct: 141 KSQICTDIIDDASGCAWETR 160
>SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1828
Score = 25.4 bits (53), Expect = 7.7
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = -2
Query: 674 EHKFLAFRHLVSHLQPEVSECAFIIRELRAELREVATPGR---AHYPGAFKL 528
EH F+AF+ VS+L + +E + +E R TP R AH P F L
Sbjct: 59 EHLFVAFKCAVSNLAKQWAELSTTDKE--KTRRMFCTPSRLNTAHRPEVFYL 108
>SPBC106.01 |mph1|SPBC1271.16c, SPBC243.01|dual specificity protein
kinase Mph1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 678
Score = 25.4 bits (53), Expect = 7.7
Identities = 10/37 (27%), Positives = 23/37 (62%)
Frame = -3
Query: 565 PLAEHTIRAPSNLNTAHSVGVVSDLTSS*AALIVSRS 455
PLA+ + + N AH + + +++++S ++I+ RS
Sbjct: 612 PLAKKPLPVSGHTNNAHPLRLSTEISASQLSMIIERS 648
>SPCC1322.12c |bub1||serine/threonine protein kinase
Bub1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1044
Score = 25.4 bits (53), Expect = 7.7
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = -2
Query: 404 GFDILDIGRTGVLAVFDYSVQIIDPSLQDLNVCLQFTSIGRSFLQQNDF 258
G ++D GR L++F+ V+ I DL C++ GR + Q D+
Sbjct: 895 GIYLIDFGRGIDLSLFEEKVKFIADWDTDLQDCIEMRE-GRPWTYQIDY 942
>SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 965
Score = 25.4 bits (53), Expect = 7.7
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +3
Query: 546 IVCSARGSDFTEFRTQFSDDERAFGYLRLQMGDEMSKRKKFMFM 677
++ S+ G D+ + R S + A+G + D++SK K+FMF+
Sbjct: 904 VIWSSGGVDY-DLRPHHSVPDTAYGMAK----DKLSKPKRFMFL 942
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,875,582
Number of Sequences: 5004
Number of extensions: 60083
Number of successful extensions: 190
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 189
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 315915086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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