Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11a18
         (684 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_03_0314 - 17600970-17600974,17601230-17601357,17601832-176019...    36   0.040
10_01_0007 - 79867-79950,80258-80303,80409-80641,80765-80836,811...    29   3.4  
01_06_0588 - 30440817-30441203,30441323-30441463,30441598-30442404     29   4.5  
12_01_0878 - 8420348-8420580,8420728-8420890                           28   6.0  
07_03_0828 + 21789849-21790259,21790319-21790951,21791635-21792159     28   6.0  
05_07_0240 + 28606345-28607316                                         28   6.0  
01_01_0407 - 3067071-3070085                                           28   6.0  
10_05_0119 + 9351951-9352047,9352336-9352361,9353555-9353791,935...    28   7.9  
09_03_0139 + 12692844-12694982                                         28   7.9  

>02_03_0314 -
           17600970-17600974,17601230-17601357,17601832-17601924,
           17602145-17602257,17602520-17602627,17602724-17602828,
           17603185-17603355,17603474-17603652,17603741-17603969,
           17604841-17604955,17605137-17605312,17606060-17606143,
           17606463-17606630,17607011-17607097,17607201-17607323
          Length = 627

 Score = 35.5 bits (78), Expect = 0.040
 Identities = 21/63 (33%), Positives = 31/63 (49%)
 Frame = +3

Query: 126 VEGYKVFQDQIDKLTDAQTLIITKFDNLMANMNELREVLGGISDKIVLLEEGATDRRKLK 305
           +E  +  +DQ  +L D       K D L   M ELR  + G+ DKI   E+   D R+L+
Sbjct: 239 LENLQTLKDQAYRLRDNIAQDQEKSDALKIQMEELRTNVQGVEDKIRRTEKSLADLRRLQ 298

Query: 306 ADI 314
            +I
Sbjct: 299 QEI 301


>10_01_0007 -
           79867-79950,80258-80303,80409-80641,80765-80836,
           81135-81230,81506-81607,81684-82349
          Length = 432

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -3

Query: 565 PLAEHTIRAPSNLNTAHSVGVVSD 494
           P+ +H   APS +  AH +G++SD
Sbjct: 229 PVTDHNFDAPSKIPFAHGMGLISD 252


>01_06_0588 - 30440817-30441203,30441323-30441463,30441598-30442404
          Length = 444

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 14/39 (35%), Positives = 25/39 (64%)
 Frame = -2

Query: 401 FDILDIGRTGVLAVFDYSVQIIDPSLQDLNVCLQFTSIG 285
           FD ++IG++ V    D+ ++ + PSL+ L + L +TS G
Sbjct: 258 FDTIEIGQS-VFTEDDFDIKTLMPSLKTLAIELSYTSEG 295


>12_01_0878 - 8420348-8420580,8420728-8420890
          Length = 131

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 6/73 (8%)
 Frame = +3

Query: 408 HSGFSNSSKVTMTTGLD-----RETIRAAYED-VRSDTTPTEWAVFKFEGARIVCSARGS 569
           H+G +N+ +  + T ++      ET R    D + S TT  EW  ++  GA ++      
Sbjct: 21  HAGVANTVRARLGTTMNLKPMSEETSREGLRDGLGSWTTGLEWRQWQLRGAAVMLEVEEE 80

Query: 570 DFTEFRTQFSDDE 608
           D         DDE
Sbjct: 81  DLERLTMTSVDDE 93


>07_03_0828 + 21789849-21790259,21790319-21790951,21791635-21792159
          Length = 522

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
 Frame = +3

Query: 126 VEGYKVFQDQIDKLTDAQTLI---ITKFDNLMANMNELREVLGGISDKIVLLEE 278
           VE Y+ F D +D L   +TL+   I +F   + +M  L      +   +V++ E
Sbjct: 350 VEAYRTFMDDMDNLPKCETLVVALIAQFHGFVPSMLHLLRRCSHVKKLVVMIIE 403


>05_07_0240 + 28606345-28607316
          Length = 323

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 16/34 (47%), Positives = 19/34 (55%)
 Frame = -2

Query: 617 ECAFIIRELRAELREVATPGRAHYPGAFKLEHRP 516
           E A  I+ LRA    +AT   AH P AF+  HRP
Sbjct: 73  EVAAAIQHLRAADPALATVIDAHDPPAFQCPHRP 106


>01_01_0407 - 3067071-3070085
          Length = 1004

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 16/48 (33%), Positives = 29/48 (60%)
 Frame = +3

Query: 141 VFQDQIDKLTDAQTLIITKFDNLMANMNELREVLGGISDKIVLLEEGA 284
           V+  +++   DAQ L +   ++L+AN++ LRE+  G+   + L E GA
Sbjct: 174 VYVFKMNSSLDAQQLAVPNLESLVANLSNLRELNLGL---VNLSENGA 218


>10_05_0119 +
           9351951-9352047,9352336-9352361,9353555-9353791,
           9355042-9355344
          Length = 220

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = -2

Query: 146 EDLVAFDVVCERAGHVSNLRH*DYGFSK-RKSNEEFGFVSQFNGYIDRC 3
           +++V    V E AG VS L   D  F +  KS   FGFV+     I+RC
Sbjct: 115 DEVVVAKYVREVAGTVSELVADDIFFGRVMKSWRRFGFVAWLGKRIERC 163


>09_03_0139 + 12692844-12694982
          Length = 712

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = +1

Query: 508 RPSGRCSSLKAPG*CARPGVATSRSSARSSLMMNAHS 618
           +PSG  + L  PG  AR   A + SSA SS     HS
Sbjct: 596 QPSGAAAVLSQPGLVARLAEALAASSASSSRSARDHS 632


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,925,192
Number of Sequences: 37544
Number of extensions: 403877
Number of successful extensions: 1150
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1150
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1733104716
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)