Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11a18
(684 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF393496-1|AAL60421.1| 146|Apis mellifera odorant binding prote... 25 0.67
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 25 0.89
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 24 1.2
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 24 1.2
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 24 1.2
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 24 1.2
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 24 1.2
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 24 1.2
AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin prot... 24 1.6
AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin prot... 24 1.6
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 23 2.1
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 23 2.1
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 23 2.1
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 23 3.6
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 6.3
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 21 8.3
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 21 8.3
>AF393496-1|AAL60421.1| 146|Apis mellifera odorant binding protein
ASP6 protein.
Length = 146
Score = 25.0 bits (52), Expect = 0.67
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 5/59 (8%)
Frame = +3
Query: 477 AYEDVRSDTTPTEWAVFKFEGARIVCSARGSDFTE-----FRTQFSDDERAFGYLRLQM 638
A ED S E A + R VCS + E FR +F DER Y++ M
Sbjct: 18 AIEDTMSKKMTIEEAKKTIKNLRKVCSKKNDTPKELLDGQFRGEFPQDERLMCYMKCIM 76
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.6 bits (51), Expect = 0.89
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3
Query: 324 KTRIDDLYAIVKDGKDSGSTDIQDVESCHSGFSNS 428
+T+ YAI + S S Q SCHS + +S
Sbjct: 203 ETKTCKKYAISSNSLGSRSRSFQRTSSCHSRYEDS 237
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.2 bits (50), Expect = 1.2
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3
Query: 324 KTRIDDLYAIVKDGKDSGSTDIQDVESCHSGFSNS 428
+T+ YAI + S S Q SCHS + +S
Sbjct: 203 ETKTCKKYAISSNSLRSRSRSFQRTSSCHSRYEDS 237
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.2 bits (50), Expect = 1.2
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3
Query: 324 KTRIDDLYAIVKDGKDSGSTDIQDVESCHSGFSNS 428
+T+ YAI + S S Q SCHS + +S
Sbjct: 203 ETKTCKKYAISSNSLRSRSRSFQRTSSCHSRYEDS 237
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.2 bits (50), Expect = 1.2
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3
Query: 324 KTRIDDLYAIVKDGKDSGSTDIQDVESCHSGFSNS 428
+T+ YAI + S S Q SCHS + +S
Sbjct: 203 ETKTCKKYAISSNSLRSRSRSFQRTSSCHSRYEDS 237
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.2 bits (50), Expect = 1.2
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3
Query: 324 KTRIDDLYAIVKDGKDSGSTDIQDVESCHSGFSNS 428
+T+ YAI + S S Q SCHS + +S
Sbjct: 203 ETKTCKKYAISSNSLRSRSRSFQRTSSCHSRYEDS 237
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 24.2 bits (50), Expect = 1.2
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3
Query: 324 KTRIDDLYAIVKDGKDSGSTDIQDVESCHSGFSNS 428
+T+ YAI + S S Q SCHS + +S
Sbjct: 203 ETKTCKKYAISSNSLRSRSRSFQRTSSCHSRYEDS 237
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 24.2 bits (50), Expect = 1.2
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3
Query: 324 KTRIDDLYAIVKDGKDSGSTDIQDVESCHSGFSNS 428
+T+ YAI + S S Q SCHS + +S
Sbjct: 203 ETKTCKKYAISSNSLRSRSRSFQRTSSCHSRYEDS 237
>AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin
protein.
Length = 339
Score = 23.8 bits (49), Expect = 1.6
Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +3
Query: 327 TRIDDL--YAIVKDGKDSGSTDIQDVESCHSGFSNS 428
T DD YAI + STD QDVES F +
Sbjct: 220 TTFDDYLDYAINPFDYEKRSTDFQDVESGSESFKRA 255
>AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin
protein.
Length = 301
Score = 23.8 bits (49), Expect = 1.6
Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +3
Query: 327 TRIDDL--YAIVKDGKDSGSTDIQDVESCHSGFSNS 428
T DD YAI + STD QDVES F +
Sbjct: 220 TTFDDYLDYAINPFDYEKRSTDFQDVESGSESFKRA 255
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.4 bits (48), Expect = 2.1
Identities = 7/15 (46%), Positives = 13/15 (86%)
Frame = +3
Query: 384 DIQDVESCHSGFSNS 428
D+++ +SCHSG+ +S
Sbjct: 489 DLRNKKSCHSGYKDS 503
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.4 bits (48), Expect = 2.1
Identities = 7/15 (46%), Positives = 13/15 (86%)
Frame = +3
Query: 384 DIQDVESCHSGFSNS 428
D+++ +SCHSG+ +S
Sbjct: 489 DLRNKKSCHSGYKDS 503
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.4 bits (48), Expect = 2.1
Identities = 7/15 (46%), Positives = 13/15 (86%)
Frame = +3
Query: 384 DIQDVESCHSGFSNS 428
D+++ +SCHSG+ +S
Sbjct: 489 DLRNKKSCHSGYKDS 503
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 3.6
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +3
Query: 324 KTRIDDLYAIVKDGKDSGSTDIQDVESCHSGFSN 425
+T+ YAI + S S Q SCHS + +
Sbjct: 203 ETKTCKKYAISSNSLRSRSRSFQRTSSCHSRYED 236
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 6.3
Identities = 9/39 (23%), Positives = 19/39 (48%)
Frame = +3
Query: 522 VFKFEGARIVCSARGSDFTEFRTQFSDDERAFGYLRLQM 638
V K+ G ++C + T+ + D+R+ R++M
Sbjct: 282 VCKWPGCEVICEDYQAFLKHLNTEHTLDDRSTAQARVRM 320
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.4 bits (43), Expect = 8.3
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -2
Query: 548 YPGAFKLEHRPLGRCSVGPHIFVSRPNR 465
Y G + R G+ S G HI V+ P R
Sbjct: 308 YGGTSVMHQR--GKLSAGCHILVATPGR 333
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 21.4 bits (43), Expect = 8.3
Identities = 7/29 (24%), Positives = 20/29 (68%)
Frame = -3
Query: 94 TFVIKIMDFLSGNRMKNLALCPNLMVTLT 8
TF+ ++ +L + + ++LC +++++LT
Sbjct: 264 TFLTVLVFYLPSDSGEKVSLCSSILLSLT 292
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,973
Number of Sequences: 438
Number of extensions: 4157
Number of successful extensions: 20
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -