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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11a16
         (594 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g69150.1 68414.m07911 DC1 domain-containing protein contains ...    32   0.33 
At4g30200.3 68417.m04295 expressed protein contains weak similar...    29   2.3  
At4g30200.2 68417.m04294 expressed protein contains weak similar...    29   2.3  
At4g30200.1 68417.m04293 expressed protein contains weak similar...    29   2.3  
At4g11550.1 68417.m01852 DC1 domain-containing protein contains ...    29   3.1  
At2g44200.1 68415.m05500 expressed protein                             29   3.1  
At2g16650.1 68415.m01911 expressed protein                             27   7.1  
At2g26580.2 68415.m03189 plant-specific transcription factor YAB...    27   9.4  
At2g26580.1 68415.m03188 plant-specific transcription factor YAB...    27   9.4  

>At1g69150.1 68414.m07911 DC1 domain-containing protein contains
           Pfam profile PF03107: DC1 domain
          Length = 517

 Score = 31.9 bits (69), Expect = 0.33
 Identities = 11/35 (31%), Positives = 22/35 (62%)
 Frame = -2

Query: 524 WKISESAMKEIQHFAANPPDLTHLNHPIHPIRKIK 420
           +K  E  +K   +   +P ++TH +HP+HP++ +K
Sbjct: 123 YKCHECDLKFHVNCEKHPAEVTHFSHPLHPLKLVK 157


>At4g30200.3 68417.m04295 expressed protein contains weak
           similarities to Pfam profiles: PF00041 Fibronectin type
           III domain, PF00628 PHD-finger; supporting cDNA
           gi|11177136|dbj|AB050977.1|
          Length = 702

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -2

Query: 533 PDLWKISESAMKEIQHFAANPPDLTHLNHP 444
           PD+ K+  SA++ ++  A  PPD+  L  P
Sbjct: 312 PDVQKLCSSALESLETIATTPPDVAALPSP 341


>At4g30200.2 68417.m04294 expressed protein contains weak
           similarities to Pfam profiles: PF00041 Fibronectin type
           III domain, PF00628 PHD-finger; supporting cDNA
           gi|11177136|dbj|AB050977.1|
          Length = 714

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -2

Query: 533 PDLWKISESAMKEIQHFAANPPDLTHLNHP 444
           PD+ K+  SA++ ++  A  PPD+  L  P
Sbjct: 312 PDVQKLCSSALESLETIATTPPDVAALPSP 341


>At4g30200.1 68417.m04293 expressed protein contains weak
           similarities to Pfam profiles: PF00041 Fibronectin type
           III domain, PF00628 PHD-finger; supporting cDNA
           gi|11177136|dbj|AB050977.1|
          Length = 685

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -2

Query: 533 PDLWKISESAMKEIQHFAANPPDLTHLNHP 444
           PD+ K+  SA++ ++  A  PPD+  L  P
Sbjct: 295 PDVQKLCSSALESLETIATTPPDVAALPSP 324


>At4g11550.1 68417.m01852 DC1 domain-containing protein contains
           Pfam profile PF03107: DC1 domain
          Length = 668

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -2

Query: 482 AANPPDLTHLNHPIHPIR 429
           A NP ++ H +HP+HP++
Sbjct: 171 AKNPSEVNHSHHPLHPLK 188


>At2g44200.1 68415.m05500 expressed protein
          Length = 493

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = +2

Query: 80  GNAIRENAETSNVKDKNTTANDLD--KPVDYENK 175
           G   REN ++   +DK   A DLD  KP +Y+N+
Sbjct: 360 GGVERENLKSYGQEDKKRKAEDLDSGKPNEYQNR 393


>At2g16650.1 68415.m01911 expressed protein
          Length = 511

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 14/51 (27%), Positives = 27/51 (52%)
 Frame = -1

Query: 534 SRFMENFGKRHERDPTFCR*PSRLDSPQPSYTPYPKNQKLNWNIFHISSRN 382
           S F + + +RH+   TF +   +L+ P P      +++K +W+ F +S  N
Sbjct: 435 STFFQKWKERHQVRYTFVKGNLKLEMPSPFSVVIQESEKGSWH-FPVSCEN 484


>At2g26580.2 68415.m03189 plant-specific transcription factor YABBY
           family protein contains Pfam profile: PF04690 YABBY
           protein
          Length = 164

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 21/83 (25%), Positives = 38/83 (45%)
 Frame = -2

Query: 293 SFLSAFTRTLKRISSHNPDTHSCNSPYGWYRNVQSENILLYFHNPRVCPNHLQ*YFYPLR 114
           S +S  T T +RI +  P+      P  + + ++ E   +  +NP +  +H +  F    
Sbjct: 85  SRISTRTITEQRIVNRPPEKRQ-RVPSAYNQFIKEEIQRIKANNPDI--SHRE-AFSTAA 140

Query: 113 LKFLHFPLLHFQSRIRRQKQCKV 45
             + HFP +HF   +   KQ K+
Sbjct: 141 KNWAHFPHIHFGLMLESNKQAKI 163


>At2g26580.1 68415.m03188 plant-specific transcription factor YABBY
           family protein contains Pfam profile: PF04690 YABBY
           protein
          Length = 164

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 21/83 (25%), Positives = 38/83 (45%)
 Frame = -2

Query: 293 SFLSAFTRTLKRISSHNPDTHSCNSPYGWYRNVQSENILLYFHNPRVCPNHLQ*YFYPLR 114
           S +S  T T +RI +  P+      P  + + ++ E   +  +NP +  +H +  F    
Sbjct: 85  SRISTRTITEQRIVNRPPEKRQ-RVPSAYNQFIKEEIQRIKANNPDI--SHRE-AFSTAA 140

Query: 113 LKFLHFPLLHFQSRIRRQKQCKV 45
             + HFP +HF   +   KQ K+
Sbjct: 141 KNWAHFPHIHFGLMLESNKQAKI 163


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,733,651
Number of Sequences: 28952
Number of extensions: 304742
Number of successful extensions: 875
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 875
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1180950720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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