BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmte11a16 (594 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g69150.1 68414.m07911 DC1 domain-containing protein contains ... 32 0.33 At4g30200.3 68417.m04295 expressed protein contains weak similar... 29 2.3 At4g30200.2 68417.m04294 expressed protein contains weak similar... 29 2.3 At4g30200.1 68417.m04293 expressed protein contains weak similar... 29 2.3 At4g11550.1 68417.m01852 DC1 domain-containing protein contains ... 29 3.1 At2g44200.1 68415.m05500 expressed protein 29 3.1 At2g16650.1 68415.m01911 expressed protein 27 7.1 At2g26580.2 68415.m03189 plant-specific transcription factor YAB... 27 9.4 At2g26580.1 68415.m03188 plant-specific transcription factor YAB... 27 9.4 >At1g69150.1 68414.m07911 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain Length = 517 Score = 31.9 bits (69), Expect = 0.33 Identities = 11/35 (31%), Positives = 22/35 (62%) Frame = -2 Query: 524 WKISESAMKEIQHFAANPPDLTHLNHPIHPIRKIK 420 +K E +K + +P ++TH +HP+HP++ +K Sbjct: 123 YKCHECDLKFHVNCEKHPAEVTHFSHPLHPLKLVK 157 >At4g30200.3 68417.m04295 expressed protein contains weak similarities to Pfam profiles: PF00041 Fibronectin type III domain, PF00628 PHD-finger; supporting cDNA gi|11177136|dbj|AB050977.1| Length = 702 Score = 29.1 bits (62), Expect = 2.3 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = -2 Query: 533 PDLWKISESAMKEIQHFAANPPDLTHLNHP 444 PD+ K+ SA++ ++ A PPD+ L P Sbjct: 312 PDVQKLCSSALESLETIATTPPDVAALPSP 341 >At4g30200.2 68417.m04294 expressed protein contains weak similarities to Pfam profiles: PF00041 Fibronectin type III domain, PF00628 PHD-finger; supporting cDNA gi|11177136|dbj|AB050977.1| Length = 714 Score = 29.1 bits (62), Expect = 2.3 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = -2 Query: 533 PDLWKISESAMKEIQHFAANPPDLTHLNHP 444 PD+ K+ SA++ ++ A PPD+ L P Sbjct: 312 PDVQKLCSSALESLETIATTPPDVAALPSP 341 >At4g30200.1 68417.m04293 expressed protein contains weak similarities to Pfam profiles: PF00041 Fibronectin type III domain, PF00628 PHD-finger; supporting cDNA gi|11177136|dbj|AB050977.1| Length = 685 Score = 29.1 bits (62), Expect = 2.3 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = -2 Query: 533 PDLWKISESAMKEIQHFAANPPDLTHLNHP 444 PD+ K+ SA++ ++ A PPD+ L P Sbjct: 295 PDVQKLCSSALESLETIATTPPDVAALPSP 324 >At4g11550.1 68417.m01852 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain Length = 668 Score = 28.7 bits (61), Expect = 3.1 Identities = 8/18 (44%), Positives = 14/18 (77%) Frame = -2 Query: 482 AANPPDLTHLNHPIHPIR 429 A NP ++ H +HP+HP++ Sbjct: 171 AKNPSEVNHSHHPLHPLK 188 >At2g44200.1 68415.m05500 expressed protein Length = 493 Score = 28.7 bits (61), Expect = 3.1 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 2/34 (5%) Frame = +2 Query: 80 GNAIRENAETSNVKDKNTTANDLD--KPVDYENK 175 G REN ++ +DK A DLD KP +Y+N+ Sbjct: 360 GGVERENLKSYGQEDKKRKAEDLDSGKPNEYQNR 393 >At2g16650.1 68415.m01911 expressed protein Length = 511 Score = 27.5 bits (58), Expect = 7.1 Identities = 14/51 (27%), Positives = 27/51 (52%) Frame = -1 Query: 534 SRFMENFGKRHERDPTFCR*PSRLDSPQPSYTPYPKNQKLNWNIFHISSRN 382 S F + + +RH+ TF + +L+ P P +++K +W+ F +S N Sbjct: 435 STFFQKWKERHQVRYTFVKGNLKLEMPSPFSVVIQESEKGSWH-FPVSCEN 484 >At2g26580.2 68415.m03189 plant-specific transcription factor YABBY family protein contains Pfam profile: PF04690 YABBY protein Length = 164 Score = 27.1 bits (57), Expect = 9.4 Identities = 21/83 (25%), Positives = 38/83 (45%) Frame = -2 Query: 293 SFLSAFTRTLKRISSHNPDTHSCNSPYGWYRNVQSENILLYFHNPRVCPNHLQ*YFYPLR 114 S +S T T +RI + P+ P + + ++ E + +NP + +H + F Sbjct: 85 SRISTRTITEQRIVNRPPEKRQ-RVPSAYNQFIKEEIQRIKANNPDI--SHRE-AFSTAA 140 Query: 113 LKFLHFPLLHFQSRIRRQKQCKV 45 + HFP +HF + KQ K+ Sbjct: 141 KNWAHFPHIHFGLMLESNKQAKI 163 >At2g26580.1 68415.m03188 plant-specific transcription factor YABBY family protein contains Pfam profile: PF04690 YABBY protein Length = 164 Score = 27.1 bits (57), Expect = 9.4 Identities = 21/83 (25%), Positives = 38/83 (45%) Frame = -2 Query: 293 SFLSAFTRTLKRISSHNPDTHSCNSPYGWYRNVQSENILLYFHNPRVCPNHLQ*YFYPLR 114 S +S T T +RI + P+ P + + ++ E + +NP + +H + F Sbjct: 85 SRISTRTITEQRIVNRPPEKRQ-RVPSAYNQFIKEEIQRIKANNPDI--SHRE-AFSTAA 140 Query: 113 LKFLHFPLLHFQSRIRRQKQCKV 45 + HFP +HF + KQ K+ Sbjct: 141 KNWAHFPHIHFGLMLESNKQAKI 163 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,733,651 Number of Sequences: 28952 Number of extensions: 304742 Number of successful extensions: 875 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 846 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 875 length of database: 12,070,560 effective HSP length: 77 effective length of database: 9,841,256 effective search space used: 1180950720 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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