Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11a13
         (777 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    25   0.89 
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   3.6  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   3.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.8  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   6.3  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 24.6 bits (51), Expect = 0.89
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = -3

Query: 574 DIHPFLATKFRSAGVLKTATALPAVSTKEPAMYPYVVFIR 455
           DI+P L T    A        L   S K+P MY  VV +R
Sbjct: 545 DINPSLCTHIIYAFATLKDHKLAEASDKDPEMYDRVVALR 584


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = +2

Query: 221 KLCGQKLCTRTSNKGRYTLTTHTSGETH 304
           KLCG K+  +     R      TS  TH
Sbjct: 366 KLCGMKIVKKRRKDKREITRKSTSSSTH 393


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 11/38 (28%), Positives = 16/38 (42%)
 Frame = +3

Query: 420 QESHLWPQYVKERIKTTYGYIAGSLVLTAGSAVAVFRT 533
           +  H W +    + KT Y Y +   V+  G     FRT
Sbjct: 224 EPDHKWKKNDSSKKKTRYYYRSVDDVIEKGKRPGAFRT 261


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = -2

Query: 737  HQDWATKEANW 705
            H DW TK + W
Sbjct: 1032 HPDWTTKPSTW 1042


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 59  YCRLGSYYHLKFM 21
           + +LGS YH+ FM
Sbjct: 336 HVKLGSLYHISFM 348


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,977
Number of Sequences: 336
Number of extensions: 4920
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20961338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)