Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11a12
         (465 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4QFG0 Cluster: Serine/threonine protein phosphatase; n...    35   1.0  
UniRef50_P41567 Cluster: Eukaryotic translation initiation facto...    31   9.4  

>UniRef50_Q4QFG0 Cluster: Serine/threonine protein phosphatase; n=5;
           Trypanosomatidae|Rep: Serine/threonine protein
           phosphatase - Leishmania major
          Length = 374

 Score = 34.7 bits (76), Expect = 1.0
 Identities = 18/58 (31%), Positives = 34/58 (58%)
 Frame = +1

Query: 214 QEYTSKSLQESRTSVGLL*MRILLSSTAIVMTEPSI*I*IRKYYKCV*SHS*FFNMID 387
           + YTSK L+E R   GL+ ++IL+ + AI+ +EP +       Y C   H  ++++++
Sbjct: 44  ERYTSKVLEEQRIPEGLI-VQILIKARAIIASEPMLVELDSPVYACGDLHGQYYDLVN 100


>UniRef50_P41567 Cluster: Eukaryotic translation initiation factor
           1; n=53; Eukaryota|Rep: Eukaryotic translation
           initiation factor 1 - Homo sapiens (Human)
          Length = 113

 Score = 31.5 bits (68), Expect = 9.4
 Identities = 17/44 (38%), Positives = 22/44 (50%)
 Frame = +3

Query: 141 KKMVKTNSNKCTCNVHQQCQPESGPGVHFQESPRVKNICRFTID 272
           KK+VK    K  CN      PE G  +  Q   R KNIC+F ++
Sbjct: 57  KKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQR-KNICQFLVE 99


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 355,056,839
Number of Sequences: 1657284
Number of extensions: 5413873
Number of successful extensions: 10521
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 10333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10521
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 25191138900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)