Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11a12
         (465 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49833-1|CAA89994.1|  250|Anopheles gambiae serine proteinase pr...    25   1.7  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    24   2.3  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    23   6.9  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    22   9.2  

>Z49833-1|CAA89994.1|  250|Anopheles gambiae serine proteinase
          protein.
          Length = 250

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = -3

Query: 97 CLFSADRRRFSLRF 56
          C+F +DR RFS++F
Sbjct: 51 CVFGSDRSRFSVKF 64


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
            protein.
          Length = 1253

 Score = 24.2 bits (50), Expect = 2.3
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 39   NKRPWSNLKENLRRS 83
            NK+ WSNL+ N +R+
Sbjct: 1080 NKQDWSNLEANFKRN 1094


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 22.6 bits (46), Expect = 6.9
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 134 EKFWSSPYISSFLSFFGRPT 75
           E F S P  ++ + F GRPT
Sbjct: 485 ELFGSKPSTTTAIQFLGRPT 504


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 22.2 bits (45), Expect = 9.2
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +2

Query: 221 TLPRVSKSQEHL*VYYRCVFYL 286
           TLP+VS +   L  Y+ C+ ++
Sbjct: 283 TLPQVSDAIPLLGTYFNCIMFM 304


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 377,948
Number of Sequences: 2352
Number of extensions: 5809
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 40395045
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)