BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmte11a11 (701 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g63090.1 68414.m07127 F-box family protein / SKP1 interacting... 32 0.42 At3g50230.1 68416.m05493 leucine-rich repeat transmembrane prote... 31 0.56 At4g09630.1 68417.m01583 expressed protein contains Pfam profile... 30 1.3 At5g27270.1 68418.m03254 pentatricopeptide (PPR) repeat-containi... 29 2.3 At2g39850.1 68415.m04894 subtilase family protein contains simil... 29 3.0 At3g18430.1 68416.m02343 calcium-binding EF hand family protein ... 29 3.9 At1g80770.1 68414.m09476 expressed protein 28 5.2 At4g16720.1 68417.m02526 60S ribosomal protein L15 (RPL15A) 28 6.9 At1g60540.1 68414.m06815 dynamin family protein similar to SP|Q9... 28 6.9 At4g18580.2 68417.m02751 expressed protein 27 9.1 At4g18580.1 68417.m02750 expressed protein 27 9.1 At4g08450.1 68417.m01393 disease resistance protein (TIR-NBS-LRR... 27 9.1 >At1g63090.1 68414.m07127 F-box family protein / SKP1 interacting partner 3-related contains Pfam profile PF00646: F-box domain Length = 289 Score = 31.9 bits (69), Expect = 0.42 Identities = 20/58 (34%), Positives = 29/58 (50%) Frame = +2 Query: 164 EAGENTHYHSDSDSVASRKSKTRYINPAIYVEKIEATHSVTSLQTGSCVDDVTPHPHS 337 EAG +HYH+ V KS + I + +I+ TH+ + G CVD V +P S Sbjct: 230 EAGNWSHYHAGDFVVGKSKSSSTKIK--FSMTQIDCTHT----KGGLCVDSVVVYPSS 281 >At3g50230.1 68416.m05493 leucine-rich repeat transmembrane protein kinase, putative receptor-like protein kinase (RKL1), Arabidopsis thaliana, EMBL:AF084034 Length = 660 Score = 31.5 bits (68), Expect = 0.56 Identities = 15/56 (26%), Positives = 32/56 (57%) Frame = -3 Query: 429 PSNVQDFLFRLVEDTLESRPLKNGVELLL*SLCGCGVTSSTQEPVCSDVTECVASI 262 P+++ D++ + ++ S+ +NG+E++ + C C VTS Q P +V + + I Sbjct: 592 PNDMLDWVRAMRQEEERSKE-ENGLEMMTQTACLCRVTSPEQRPTMKEVIKMIQEI 646 >At4g09630.1 68417.m01583 expressed protein contains Pfam profile: PF04765 protein of unknown function (DUF616) Length = 711 Score = 30.3 bits (65), Expect = 1.3 Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 1/69 (1%) Frame = +2 Query: 86 MDRGHFGDSARNRSDCELKRYNHVFDEAGENTHYHSDSDSVASRK-SKTRYINPAIYVEK 262 +D GH GD K +E+ +++H H++ + S K + + +++ +K Sbjct: 248 VDMGHDGDENEESHKDNHKHNEDGAEESHKDSHRHNEDGAEESHKETASVFLHSTTKHQK 307 Query: 263 IEATHSVTS 289 IE H TS Sbjct: 308 IEKVHGATS 316 >At5g27270.1 68418.m03254 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat Length = 1038 Score = 29.5 bits (63), Expect = 2.3 Identities = 13/39 (33%), Positives = 23/39 (58%) Frame = +2 Query: 221 SKTRYINPAIYVEKIEATHSVTSLQTGSCVDDVTPHPHS 337 + T + NP+I++ KI + +S S+++ S V P P S Sbjct: 7 TSTTHFNPSIFLPKIPSRNSRISIKSSSSSSKVRPDPWS 45 >At2g39850.1 68415.m04894 subtilase family protein contains similarity to subtilisin-like protease C1 GI:13325079 from [Glycine max] Length = 774 Score = 29.1 bits (62), Expect = 3.0 Identities = 18/52 (34%), Positives = 26/52 (50%) Frame = +3 Query: 534 RPQLQKKSENVTRKRNRKLFVSGWRARSKKNAKRRVWKNKNNTLSLQPHPNN 689 R +L K+ V+ +R L VS R+R+ K R W N TL + +P N Sbjct: 76 RQKLMSKTTTVSSRRREVLEVS--RSRNLKLQTTRSWDFMNLTLKAERNPEN 125 >At3g18430.1 68416.m02343 calcium-binding EF hand family protein similar to Calcineurin B subunit (Protein phosphatase 2B regulatory subunit) (Calcineurin regulatory subunit) SP:P42322 from [Naegleria gruberi]; contains Pfam profile PF00036: EF hand Length = 175 Score = 28.7 bits (61), Expect = 3.9 Identities = 14/37 (37%), Positives = 22/37 (59%) Frame = -1 Query: 512 VEKCQAHLHDKYDRYEVCLHLYKLECDLPVMYKIFFS 402 +E+ Q+H HD +++ E+ L LY+ C L K F S Sbjct: 13 IEEVQSHCHDLFEQQEI-LSLYQRFCQLDRNAKGFIS 48 >At1g80770.1 68414.m09476 expressed protein Length = 451 Score = 28.3 bits (60), Expect = 5.2 Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 3/32 (9%) Frame = +2 Query: 416 CTLLGGHIQVYIDEDTPRNDR---TYREDGPD 502 C LLGG +Y ED +D YRE GPD Sbjct: 376 CDLLGGSPVMYAKEDRSSDDAEIIKYRERGPD 407 >At4g16720.1 68417.m02526 60S ribosomal protein L15 (RPL15A) Length = 204 Score = 27.9 bits (59), Expect = 6.9 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +3 Query: 573 KRNRKLFVSGWRARSKKNAKRRVWKNKNNTLSLQ 674 K+NR L G + ++R WK KNN+LSL+ Sbjct: 169 KKNRGLRGKGHNNHKNRPSRRATWK-KNNSLSLR 201 >At1g60540.1 68414.m06815 dynamin family protein similar to SP|Q91192 Interferon-induced GTP-binding protein Mx {Oncorhynchus mykiss}; contains Pfam profiles PF01031: Dynamin central region, PF00350: Dynamin family, PF02212: Dynamin GTPase effector domain Length = 648 Score = 27.9 bits (59), Expect = 6.9 Identities = 11/32 (34%), Positives = 13/32 (40%) Frame = +2 Query: 275 HSVTSLQTGSCVDDVTPHPHSDYRSNSTPFLS 370 H VTS + PHPH D P +S Sbjct: 7 HDVTSTTPSLAIVQANPHPHKDVVPTEAPIVS 38 >At4g18580.2 68417.m02751 expressed protein Length = 115 Score = 27.5 bits (58), Expect = 9.1 Identities = 21/69 (30%), Positives = 31/69 (44%) Frame = +2 Query: 146 YNHVFDEAGENTHYHSDSDSVASRKSKTRYINPAIYVEKIEATHSVTSLQTGSCVDDVTP 325 YN DE+GE HSD + V K++ I P + EK A + L + DD + Sbjct: 45 YNDSDDESGEGDKGHSDDEYVVVDKAEA--IMPNVKTEKPGAI-QMMELSKDAVGDDESK 101 Query: 326 HPHSDYRSN 352 + Y S+ Sbjct: 102 AKDAGYSSD 110 >At4g18580.1 68417.m02750 expressed protein Length = 115 Score = 27.5 bits (58), Expect = 9.1 Identities = 21/69 (30%), Positives = 31/69 (44%) Frame = +2 Query: 146 YNHVFDEAGENTHYHSDSDSVASRKSKTRYINPAIYVEKIEATHSVTSLQTGSCVDDVTP 325 YN DE+GE HSD + V K++ I P + EK A + L + DD + Sbjct: 45 YNDSDDESGEGDKGHSDDEYVVVDKAEA--IMPNVKTEKPGAI-QMMELSKDAVGDDESK 101 Query: 326 HPHSDYRSN 352 + Y S+ Sbjct: 102 AKDAGYSSD 110 >At4g08450.1 68417.m01393 disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein. Length = 1234 Score = 27.5 bits (58), Expect = 9.1 Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 4/52 (7%) Frame = +2 Query: 50 PCTYDLLIIIANMDRGHFGDS----ARNRSDCELKRYNHVFDEAGENTHYHS 193 P YDL G FG+S +NR+D E++R+ YH+ Sbjct: 97 PVFYDLDPSDVRKQEGEFGESFKETCKNRTDYEIQRWGQALTNVANIAGYHT 148 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,824,505 Number of Sequences: 28952 Number of extensions: 292338 Number of successful extensions: 909 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 886 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 909 length of database: 12,070,560 effective HSP length: 79 effective length of database: 9,783,352 effective search space used: 1506636208 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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