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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11a11
         (701 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g63090.1 68414.m07127 F-box family protein / SKP1 interacting...    32   0.42 
At3g50230.1 68416.m05493 leucine-rich repeat transmembrane prote...    31   0.56 
At4g09630.1 68417.m01583 expressed protein contains Pfam profile...    30   1.3  
At5g27270.1 68418.m03254 pentatricopeptide (PPR) repeat-containi...    29   2.3  
At2g39850.1 68415.m04894 subtilase family protein contains simil...    29   3.0  
At3g18430.1 68416.m02343 calcium-binding EF hand family protein ...    29   3.9  
At1g80770.1 68414.m09476 expressed protein                             28   5.2  
At4g16720.1 68417.m02526 60S ribosomal protein L15 (RPL15A)            28   6.9  
At1g60540.1 68414.m06815 dynamin family protein similar to SP|Q9...    28   6.9  
At4g18580.2 68417.m02751 expressed protein                             27   9.1  
At4g18580.1 68417.m02750 expressed protein                             27   9.1  
At4g08450.1 68417.m01393 disease resistance protein (TIR-NBS-LRR...    27   9.1  

>At1g63090.1 68414.m07127 F-box family protein / SKP1 interacting
           partner 3-related contains Pfam profile PF00646: F-box
           domain
          Length = 289

 Score = 31.9 bits (69), Expect = 0.42
 Identities = 20/58 (34%), Positives = 29/58 (50%)
 Frame = +2

Query: 164 EAGENTHYHSDSDSVASRKSKTRYINPAIYVEKIEATHSVTSLQTGSCVDDVTPHPHS 337
           EAG  +HYH+    V   KS +  I     + +I+ TH+    + G CVD V  +P S
Sbjct: 230 EAGNWSHYHAGDFVVGKSKSSSTKIK--FSMTQIDCTHT----KGGLCVDSVVVYPSS 281


>At3g50230.1 68416.m05493 leucine-rich repeat transmembrane protein
           kinase, putative receptor-like protein kinase (RKL1),
           Arabidopsis thaliana, EMBL:AF084034
          Length = 660

 Score = 31.5 bits (68), Expect = 0.56
 Identities = 15/56 (26%), Positives = 32/56 (57%)
 Frame = -3

Query: 429 PSNVQDFLFRLVEDTLESRPLKNGVELLL*SLCGCGVTSSTQEPVCSDVTECVASI 262
           P+++ D++  + ++   S+  +NG+E++  + C C VTS  Q P   +V + +  I
Sbjct: 592 PNDMLDWVRAMRQEEERSKE-ENGLEMMTQTACLCRVTSPEQRPTMKEVIKMIQEI 646


>At4g09630.1 68417.m01583 expressed protein contains Pfam profile:
           PF04765 protein of unknown function (DUF616)
          Length = 711

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
 Frame = +2

Query: 86  MDRGHFGDSARNRSDCELKRYNHVFDEAGENTHYHSDSDSVASRK-SKTRYINPAIYVEK 262
           +D GH GD          K      +E+ +++H H++  +  S K + + +++     +K
Sbjct: 248 VDMGHDGDENEESHKDNHKHNEDGAEESHKDSHRHNEDGAEESHKETASVFLHSTTKHQK 307

Query: 263 IEATHSVTS 289
           IE  H  TS
Sbjct: 308 IEKVHGATS 316


>At5g27270.1 68418.m03254 pentatricopeptide (PPR) repeat-containing
           protein contains Pfam profile PF01535: PPR repeat
          Length = 1038

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = +2

Query: 221 SKTRYINPAIYVEKIEATHSVTSLQTGSCVDDVTPHPHS 337
           + T + NP+I++ KI + +S  S+++ S    V P P S
Sbjct: 7   TSTTHFNPSIFLPKIPSRNSRISIKSSSSSSKVRPDPWS 45


>At2g39850.1 68415.m04894 subtilase family protein contains
           similarity to subtilisin-like protease C1 GI:13325079
           from [Glycine max]
          Length = 774

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = +3

Query: 534 RPQLQKKSENVTRKRNRKLFVSGWRARSKKNAKRRVWKNKNNTLSLQPHPNN 689
           R +L  K+  V+ +R   L VS  R+R+ K    R W   N TL  + +P N
Sbjct: 76  RQKLMSKTTTVSSRRREVLEVS--RSRNLKLQTTRSWDFMNLTLKAERNPEN 125


>At3g18430.1 68416.m02343 calcium-binding EF hand family protein
           similar to Calcineurin B subunit (Protein phosphatase 2B
           regulatory subunit) (Calcineurin regulatory subunit)
           SP:P42322 from [Naegleria gruberi]; contains Pfam
           profile PF00036: EF hand
          Length = 175

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = -1

Query: 512 VEKCQAHLHDKYDRYEVCLHLYKLECDLPVMYKIFFS 402
           +E+ Q+H HD +++ E+ L LY+  C L    K F S
Sbjct: 13  IEEVQSHCHDLFEQQEI-LSLYQRFCQLDRNAKGFIS 48


>At1g80770.1 68414.m09476 expressed protein
          Length = 451

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
 Frame = +2

Query: 416 CTLLGGHIQVYIDEDTPRNDR---TYREDGPD 502
           C LLGG   +Y  ED   +D     YRE GPD
Sbjct: 376 CDLLGGSPVMYAKEDRSSDDAEIIKYRERGPD 407


>At4g16720.1 68417.m02526 60S ribosomal protein L15 (RPL15A)
          Length = 204

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +3

Query: 573 KRNRKLFVSGWRARSKKNAKRRVWKNKNNTLSLQ 674
           K+NR L   G      + ++R  WK KNN+LSL+
Sbjct: 169 KKNRGLRGKGHNNHKNRPSRRATWK-KNNSLSLR 201


>At1g60540.1 68414.m06815 dynamin family protein similar to
           SP|Q91192 Interferon-induced GTP-binding protein Mx
           {Oncorhynchus mykiss}; contains Pfam profiles PF01031:
           Dynamin central region, PF00350: Dynamin family,
           PF02212: Dynamin GTPase effector domain
          Length = 648

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 11/32 (34%), Positives = 13/32 (40%)
 Frame = +2

Query: 275 HSVTSLQTGSCVDDVTPHPHSDYRSNSTPFLS 370
           H VTS      +    PHPH D      P +S
Sbjct: 7   HDVTSTTPSLAIVQANPHPHKDVVPTEAPIVS 38


>At4g18580.2 68417.m02751 expressed protein
          Length = 115

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 21/69 (30%), Positives = 31/69 (44%)
 Frame = +2

Query: 146 YNHVFDEAGENTHYHSDSDSVASRKSKTRYINPAIYVEKIEATHSVTSLQTGSCVDDVTP 325
           YN   DE+GE    HSD + V   K++   I P +  EK  A   +  L   +  DD + 
Sbjct: 45  YNDSDDESGEGDKGHSDDEYVVVDKAEA--IMPNVKTEKPGAI-QMMELSKDAVGDDESK 101

Query: 326 HPHSDYRSN 352
              + Y S+
Sbjct: 102 AKDAGYSSD 110


>At4g18580.1 68417.m02750 expressed protein
          Length = 115

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 21/69 (30%), Positives = 31/69 (44%)
 Frame = +2

Query: 146 YNHVFDEAGENTHYHSDSDSVASRKSKTRYINPAIYVEKIEATHSVTSLQTGSCVDDVTP 325
           YN   DE+GE    HSD + V   K++   I P +  EK  A   +  L   +  DD + 
Sbjct: 45  YNDSDDESGEGDKGHSDDEYVVVDKAEA--IMPNVKTEKPGAI-QMMELSKDAVGDDESK 101

Query: 326 HPHSDYRSN 352
              + Y S+
Sbjct: 102 AKDAGYSSD 110


>At4g08450.1 68417.m01393 disease resistance protein (TIR-NBS-LRR
           class), putative domain signature TIR-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 1234

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
 Frame = +2

Query: 50  PCTYDLLIIIANMDRGHFGDS----ARNRSDCELKRYNHVFDEAGENTHYHS 193
           P  YDL         G FG+S     +NR+D E++R+            YH+
Sbjct: 97  PVFYDLDPSDVRKQEGEFGESFKETCKNRTDYEIQRWGQALTNVANIAGYHT 148


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,824,505
Number of Sequences: 28952
Number of extensions: 292338
Number of successful extensions: 909
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 909
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1506636208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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