Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11a09
         (299 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0457 + 10503801-10507358                                         27   2.1  
01_04_0102 + 16030094-16030462,16030595-16030714,16031715-160317...    26   4.7  
09_04_0636 + 19150966-19151037,19151150-19151291,19151404-191514...    26   6.3  

>02_02_0457 + 10503801-10507358
          Length = 1185

 Score = 27.5 bits (58), Expect = 2.1
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -3

Query: 132  KHLKIILIFEI*SSVKCCLPLHLIYKLQHTPSTLAHIF 19
            K LK+I  + +   ++CC    L++ L H  S   H++
Sbjct: 933  KKLKLINSWNLLGDIECCSLTSLVFSLWHVTSIPLHVW 970


>01_04_0102 +
           16030094-16030462,16030595-16030714,16031715-16031792,
           16032760-16032933,16033844-16033921,16034338-16034510,
           16034757-16034912,16036460-16036621,16036815-16036826,
           16036947-16036962,16037663-16037875
          Length = 516

 Score = 26.2 bits (55), Expect = 4.7
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -2

Query: 130 TFKNHSNIRNLIKCQVLPAITFNIQTPTHPLNTCTH 23
           TF+ HS +R LI+C   P     + TP  P +   H
Sbjct: 363 TFRGHSVLRTLIRCYFSP--IHRLITPKPPFSLGMH 396


>09_04_0636 +
           19150966-19151037,19151150-19151291,19151404-19151492,
           19151589-19152308
          Length = 340

 Score = 25.8 bits (54), Expect = 6.3
 Identities = 13/52 (25%), Positives = 23/52 (44%)
 Frame = +2

Query: 26  CASVEGVCWSLYIKCNGRQHLTLD*ISNIRMIFKCLKNRSLYSRKKMSLLLI 181
           CA+V G+ WS +        + +D           L+ R  +SRK++  L +
Sbjct: 233 CAAVAGLPWSAFAPVLADAGVVVDLTPGAAAFATALRQRVTFSRKRLVPLFV 284


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,516,615
Number of Sequences: 37544
Number of extensions: 102736
Number of successful extensions: 179
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 179
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 339576272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)