Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11a09
(299 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_24442| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.17
SB_5256| Best HMM Match : EGF_2 (HMM E-Value=5.1) 31 0.17
SB_28726| Best HMM Match : 7tm_1 (HMM E-Value=3e-09) 27 2.1
SB_34614| Best HMM Match : FMO-like (HMM E-Value=0) 27 2.8
SB_23051| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.8
SB_38038| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.5
SB_31382| Best HMM Match : RVT_1 (HMM E-Value=2.2e-12) 26 6.5
SB_20916| Best HMM Match : zf-C3HC4 (HMM E-Value=0.013) 26 6.5
SB_4811| Best HMM Match : zf-C3HC4 (HMM E-Value=0.013) 26 6.5
SB_6944| Best HMM Match : IF4E (HMM E-Value=9.6) 26 6.5
>SB_24442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 673
Score = 31.1 bits (67), Expect = 0.17
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -3
Query: 297 FFLLHYNYIADSFNTFTPLYNFYLYIFYK 211
++L YNY D +N + +YN+YL ++ K
Sbjct: 583 YYLDVYNYYLDVYNYYLDVYNYYLDVYNK 611
Score = 29.9 bits (64), Expect = 0.40
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -3
Query: 297 FFLLHYNYIADSFNTFTPLYNFYLYIF 217
++L YNY D +N + +YN+YL ++
Sbjct: 548 YYLDVYNYYLDIYNYYLDVYNYYLDVY 574
Score = 29.9 bits (64), Expect = 0.40
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -3
Query: 297 FFLLHYNYIADSFNTFTPLYNFYLYIF 217
++L YNY D +N + +YN+YL ++
Sbjct: 555 YYLDIYNYYLDVYNYYLDVYNYYLDVY 581
Score = 29.9 bits (64), Expect = 0.40
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -3
Query: 297 FFLLHYNYIADSFNTFTPLYNFYLYIF 217
++L YNY D +N + +YN+YL ++
Sbjct: 562 YYLDVYNYYLDVYNYYLDVYNYYLDVY 588
Score = 29.9 bits (64), Expect = 0.40
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -3
Query: 297 FFLLHYNYIADSFNTFTPLYNFYLYIF 217
++L YNY D +N + +YN+YL ++
Sbjct: 569 YYLDVYNYYLDVYNYYLDVYNYYLDVY 595
Score = 29.9 bits (64), Expect = 0.40
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -3
Query: 297 FFLLHYNYIADSFNTFTPLYNFYLYIF 217
++L YNY D +N + +YN+YL ++
Sbjct: 576 YYLDVYNYYLDVYNYYLDVYNYYLDVY 602
Score = 29.1 bits (62), Expect = 0.70
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -3
Query: 282 YNYIADSFNTFTPLYNFYLYIF 217
YNY D +N + +YN+YL ++
Sbjct: 546 YNYYLDVYNYYLDIYNYYLDVY 567
>SB_5256| Best HMM Match : EGF_2 (HMM E-Value=5.1)
Length = 122
Score = 31.1 bits (67), Expect = 0.17
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -3
Query: 297 FFLLHYNYIADSFNTFTPLYNFYLYIFYK 211
++L YNY D +N + +YN+YL ++ K
Sbjct: 67 YYLDVYNYYLDVYNYYLDVYNYYLDVYNK 95
Score = 29.9 bits (64), Expect = 0.40
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -3
Query: 297 FFLLHYNYIADSFNTFTPLYNFYLYIF 217
++L YNY D +N + +YN+YL ++
Sbjct: 11 YYLDVYNYYLDIYNYYLDVYNYYLDVY 37
Score = 29.9 bits (64), Expect = 0.40
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -3
Query: 297 FFLLHYNYIADSFNTFTPLYNFYLYIF 217
++L YNY D +N + +YN+YL ++
Sbjct: 18 YYLDIYNYYLDVYNYYLDVYNYYLDVY 44
Score = 29.9 bits (64), Expect = 0.40
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -3
Query: 297 FFLLHYNYIADSFNTFTPLYNFYLYIF 217
++L YNY D +N + +YN+YL ++
Sbjct: 25 YYLDVYNYYLDVYNYYLDVYNYYLDVY 51
Score = 29.9 bits (64), Expect = 0.40
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -3
Query: 297 FFLLHYNYIADSFNTFTPLYNFYLYIF 217
++L YNY D +N + +YN+YL ++
Sbjct: 32 YYLDVYNYYLDVYNYYLDVYNYYLDVY 58
Score = 29.9 bits (64), Expect = 0.40
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -3
Query: 297 FFLLHYNYIADSFNTFTPLYNFYLYIF 217
++L YNY D +N + +YN+YL ++
Sbjct: 39 YYLDVYNYYLDVYNYYLDVYNYYLDVY 65
Score = 29.9 bits (64), Expect = 0.40
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -3
Query: 297 FFLLHYNYIADSFNTFTPLYNFYLYIF 217
++L YNY D +N + +YN+YL ++
Sbjct: 46 YYLDVYNYYLDVYNYYLDVYNYYLDVY 72
Score = 29.9 bits (64), Expect = 0.40
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -3
Query: 297 FFLLHYNYIADSFNTFTPLYNFYLYIF 217
++L YNY D +N + +YN+YL ++
Sbjct: 53 YYLDVYNYYLDVYNYYLDVYNYYLDVY 79
Score = 29.9 bits (64), Expect = 0.40
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -3
Query: 297 FFLLHYNYIADSFNTFTPLYNFYLYIF 217
++L YNY D +N + +YN+YL ++
Sbjct: 60 YYLDVYNYYLDVYNYYLDVYNYYLDVY 86
Score = 29.1 bits (62), Expect = 0.70
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -3
Query: 282 YNYIADSFNTFTPLYNFYLYIF 217
YNY D +N + +YN+YL ++
Sbjct: 9 YNYYLDVYNYYLDIYNYYLDVY 30
>SB_28726| Best HMM Match : 7tm_1 (HMM E-Value=3e-09)
Length = 409
Score = 27.5 bits (58), Expect = 2.1
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Frame = -3
Query: 165 IFLREYNDLFFKHLKIILIFEI*SS----VKCCLPLHLIYKLQHTPS 37
I LR D F H++ +L F + S+ V CL HL+YKL+ +P+
Sbjct: 162 IILRAEQD-FLAHVRGVLGFLLKSALPFFVITCLYAHLVYKLRKSPN 207
>SB_34614| Best HMM Match : FMO-like (HMM E-Value=0)
Length = 475
Score = 27.1 bits (57), Expect = 2.8
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -3
Query: 288 LHYNYIADSFNTFTPLYNFYLYIFYKT 208
+H++Y+ F+ F ++ Y YI Y+T
Sbjct: 78 MHHSYVMKYFHLFARHFDLYKYIRYRT 104
>SB_23051| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2141
Score = 27.1 bits (57), Expect = 2.8
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +3
Query: 3 AIESKEKCVQVLRGCVGVC 59
AI S E+C+++LRG V VC
Sbjct: 507 AIRSLEQCLEILRGEVEVC 525
>SB_38038| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 25.8 bits (54), Expect = 6.5
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -2
Query: 103 NLIKCQVLPAITFNIQTPTHPLNTCTHFSF 14
N+ Q P+ NIQ THP+ + T + F
Sbjct: 171 NVPNHQAAPSQAINIQVTTHPVGSSTFWFF 200
>SB_31382| Best HMM Match : RVT_1 (HMM E-Value=2.2e-12)
Length = 1799
Score = 25.8 bits (54), Expect = 6.5
Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 17 RKMCASVEGVCWSLYIKCNGRQHLTLD*I-SNIRMIFKCL 133
RK C ++GV W+ + NG+ +D + S + F C+
Sbjct: 1106 RKFCEDLKGVDWNSVLTPNGQAVTGVDDLWSGFKSAFMCI 1145
>SB_20916| Best HMM Match : zf-C3HC4 (HMM E-Value=0.013)
Length = 507
Score = 25.8 bits (54), Expect = 6.5
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -2
Query: 103 NLIKCQVLPAITFNIQTPTHPLNTCTHFSF 14
N+ Q P+ NIQ THP+ + T + F
Sbjct: 398 NVPNQQAAPSQAINIQVTTHPVGSSTFWFF 427
>SB_4811| Best HMM Match : zf-C3HC4 (HMM E-Value=0.013)
Length = 538
Score = 25.8 bits (54), Expect = 6.5
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -2
Query: 103 NLIKCQVLPAITFNIQTPTHPLNTCTHFSF 14
N+ Q P+ NIQ THP+ + T + F
Sbjct: 353 NVPNHQAAPSQAINIQVTTHPVGSSTFWFF 382
>SB_6944| Best HMM Match : IF4E (HMM E-Value=9.6)
Length = 389
Score = 25.8 bits (54), Expect = 6.5
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -2
Query: 103 NLIKCQVLPAITFNIQTPTHPLNTCTHFSF 14
N+ Q P+ NIQ THP+ + T + F
Sbjct: 204 NVPNHQAAPSQAINIQVTTHPVGSSTFWFF 233
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,226,784
Number of Sequences: 59808
Number of extensions: 139215
Number of successful extensions: 240
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 238
length of database: 16,821,457
effective HSP length: 71
effective length of database: 12,575,089
effective search space used: 352102492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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