Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11a09
         (299 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-1131|AAS65134.1| 1427|Drosophila melanogaster CG11870-P...    27   5.8  
AE014297-1130|AAF54517.3| 1427|Drosophila melanogaster CG11870-P...    27   5.8  
AE014297-1129|AAF54516.3| 1427|Drosophila melanogaster CG11870-P...    27   5.8  
X73154-1|CAA51678.1| 2515|Drosophila melanogaster tenascin-like ...    26   7.7  
AF008228-1|AAB88281.1| 2731|Drosophila melanogaster odd Oz prote...    26   7.7  
AF008227-1|AAC05080.1| 2731|Drosophila melanogaster odd Oz produ...    26   7.7  
AE014296-3669|AAF51824.2| 2731|Drosophila melanogaster CG5723-PB...    26   7.7  

>AE014297-1131|AAS65134.1| 1427|Drosophila melanogaster CG11870-PC,
            isoform C protein.
          Length = 1427

 Score = 26.6 bits (56), Expect = 5.8
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -2

Query: 121  NHSNIRNLIKCQVLPAITFNIQTPTHPLN 35
            N SNI N   C  +P + +N+ + T P N
Sbjct: 975  NSSNIGN---CNTMPYVNYNVNSRTRPFN 1000


>AE014297-1130|AAF54517.3| 1427|Drosophila melanogaster CG11870-PB,
            isoform B protein.
          Length = 1427

 Score = 26.6 bits (56), Expect = 5.8
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -2

Query: 121  NHSNIRNLIKCQVLPAITFNIQTPTHPLN 35
            N SNI N   C  +P + +N+ + T P N
Sbjct: 975  NSSNIGN---CNTMPYVNYNVNSRTRPFN 1000


>AE014297-1129|AAF54516.3| 1427|Drosophila melanogaster CG11870-PA,
            isoform A protein.
          Length = 1427

 Score = 26.6 bits (56), Expect = 5.8
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -2

Query: 121  NHSNIRNLIKCQVLPAITFNIQTPTHPLN 35
            N SNI N   C  +P + +N+ + T P N
Sbjct: 975  NSSNIGN---CNTMPYVNYNVNSRTRPFN 1000


>X73154-1|CAA51678.1| 2515|Drosophila melanogaster tenascin-like
            protein protein.
          Length = 2515

 Score = 26.2 bits (55), Expect = 7.7
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = -2

Query: 139  VF*TFKNHSNIRNLIKCQVLPAITFNIQTPTHPLNTCT 26
            +F  F  H + RN++  +     T+N+ T    L+T T
Sbjct: 1308 IFNRFGQHVSTRNILTGETTYVFTYNVNTSNGKLSTVT 1345


>AF008228-1|AAB88281.1| 2731|Drosophila melanogaster odd Oz protein
            protein.
          Length = 2731

 Score = 26.2 bits (55), Expect = 7.7
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = -2

Query: 139  VF*TFKNHSNIRNLIKCQVLPAITFNIQTPTHPLNTCT 26
            +F  F  H + RN++  +     T+N+ T    L+T T
Sbjct: 1524 IFNRFGQHVSTRNILTGETTYVFTYNVNTSNGKLSTVT 1561


>AF008227-1|AAC05080.1| 2731|Drosophila melanogaster odd Oz product
            protein.
          Length = 2731

 Score = 26.2 bits (55), Expect = 7.7
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = -2

Query: 139  VF*TFKNHSNIRNLIKCQVLPAITFNIQTPTHPLNTCT 26
            +F  F  H + RN++  +     T+N+ T    L+T T
Sbjct: 1524 IFNRFGQHVSTRNILTGETTYVFTYNVNTSNGKLSTVT 1561


>AE014296-3669|AAF51824.2| 2731|Drosophila melanogaster CG5723-PB
            protein.
          Length = 2731

 Score = 26.2 bits (55), Expect = 7.7
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = -2

Query: 139  VF*TFKNHSNIRNLIKCQVLPAITFNIQTPTHPLNTCT 26
            +F  F  H + RN++  +     T+N+ T    L+T T
Sbjct: 1524 IFNRFGQHVSTRNILTGETTYVFTYNVNTSNGKLSTVT 1561


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,841,954
Number of Sequences: 53049
Number of extensions: 200313
Number of successful extensions: 674
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 674
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 549010566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)