Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11a06
         (607 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   6.1  
Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.      21   8.1  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   8.1  

>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -3

Query: 71  FVHFFYNYFKIMYVCL 24
           +  F+Y YF  + VC+
Sbjct: 153 YFQFYYTYFLCVIVCI 168


>Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.
          Length = 72

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = +3

Query: 234 SFWS*RPRCGTSRSKW 281
           S W  R RC    SKW
Sbjct: 3   SLWKVRGRCEGKDSKW 18


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -3

Query: 80  HPYFVHFFYNYFKIMYVC 27
           H Y + F  NY + +Y C
Sbjct: 131 HRYTLSFIENYCQFLYNC 148


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,212
Number of Sequences: 336
Number of extensions: 1722
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)