Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11a05
         (209 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   0.34 
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   1.0  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    20   3.1  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    19   4.1  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    19   5.5  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    19   7.2  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    19   7.2  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    18   9.5  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    18   9.5  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    18   9.5  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 0.34
 Identities = 6/24 (25%), Positives = 14/24 (58%)
 Frame = +2

Query: 5   VCTFYIHFCSYVF*CHILTMSIVY 76
           +C +Y ++   +F  H+L +  +Y
Sbjct: 111 LCVYYFYYAFIIFTVHLLFLLCIY 134


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.4 bits (43), Expect = 1.0
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -2

Query: 208 FFFHNYKIQMPIKECRVNKEC 146
           FF   Y     I EC+ N EC
Sbjct: 28  FFGRTYNNISSISECKNNGEC 48


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +2

Query: 155 VYSAFLYWHLYFIIM 199
           +YS FLY  + ++I+
Sbjct: 136 IYSQFLYGFMIYLIL 150


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -1

Query: 83  SICRQLTL*VYDIKIRNYKNVYKTYRH 3
           SIC Q    V+D   R+    ++ Y H
Sbjct: 134 SICVQTEKSVFDFLCRHTVEYFQNYIH 160


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +3

Query: 12  RFIYIFVVTYFNVIYLQC 65
           +F YIF    +N+++  C
Sbjct: 186 QFHYIFTYMPYNIVFGLC 203


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 50  HILTMSIVYKLTTNKRFVDN 109
           +I  M  VY+  +N R VDN
Sbjct: 493 NIQRMKQVYQQLSNYRNVDN 512


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +1

Query: 55  TYNVNCLQIDYEQKICRQLRRASFL 129
           TYN + L +D+E  +  +  RA+F+
Sbjct: 132 TYNFDGLDVDWEYPL--EGDRANFI 154


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 5/10 (50%), Positives = 7/10 (70%)
 Frame = +2

Query: 5   VCTFYIHFCS 34
           +C FY  FC+
Sbjct: 541 LCNFYRKFCA 550


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 6/24 (25%), Positives = 14/24 (58%)
 Frame = +1

Query: 10  YVLYTFL*LRILMSYTYNVNCLQI 81
           Y +  F+   +++ +TY   C++I
Sbjct: 207 YSISVFMVPLVVLIFTYTSICIEI 230


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +1

Query: 55  TYNVNCLQIDYE 90
           TYN + L +D+E
Sbjct: 134 TYNYDGLDVDWE 145


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,295
Number of Sequences: 336
Number of extensions: 738
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 45
effective length of database: 107,465
effective search space used:  2579160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)