Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11a03
(718 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC061903-1|AAH61903.1| 167|Homo sapiens iron-sulfur cluster sca... 237 2e-62
BC011906-1|AAH11906.1| 167|Homo sapiens iron-sulfur cluster sca... 236 5e-62
AY009128-1|AAG37428.1| 167|Homo sapiens ISCU2 protein. 236 5e-62
AY009127-1|AAG37427.1| 142|Homo sapiens ISCU1 protein. 230 3e-60
U47101-1|AAC50885.1| 121|Homo sapiens NifU-like protein protein. 212 1e-54
AL022152-2|CAD27434.1| 1142|Homo sapiens melanoma antigen family... 31 4.1
AF064589-1|AAC18837.1| 1142|Homo sapiens melanoma-associated ant... 31 4.1
AL022152-1|CAI42087.1| 118|Homo sapiens melanoma antigen family... 30 9.5
>BC061903-1|AAH61903.1| 167|Homo sapiens iron-sulfur cluster
scaffold homolog (E. coli) protein.
Length = 167
Score = 237 bits (581), Expect = 2e-62
Identities = 116/158 (73%), Positives = 130/158 (82%), Gaps = 3/158 (1%)
Frame = +1
Query: 118 AFLINGIRRCMCLKGFGSPNVILAAP---YHANVIDHYENPRNVGSLDKKDKNVGTGLVG 288
AF + + L+ P L+AP YH V+DHYENPRNVGSLDK KNVGTGLVG
Sbjct: 6 AFRLRRAASALLLRSPRLPARELSAPARLYHKKVVDHYENPRNVGSLDKTSKNVGTGLVG 65
Query: 289 APACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDI 468
APACGDVMKLQI+VDE GKIVDA+FKTFGCGSAIASSSLATEWVKGKTV+EAL +KNTDI
Sbjct: 66 APACGDVMKLQIQVDEKGKIVDARFKTFGCGSAIASSSLATEWVKGKTVEEALTIKNTDI 125
Query: 469 AKELSLPPVKLHCSMLAEDAIKAALSDYRIKQQTENKE 582
AKEL LPPVKLHCSMLAEDAIKAAL+DY++KQ+ + E
Sbjct: 126 AKELCLPPVKLHCSMLAEDAIKAALADYKLKQEPKKGE 163
>BC011906-1|AAH11906.1| 167|Homo sapiens iron-sulfur cluster
scaffold homolog (E. coli) protein.
Length = 167
Score = 236 bits (578), Expect = 5e-62
Identities = 112/136 (82%), Positives = 123/136 (90%), Gaps = 3/136 (2%)
Frame = +1
Query: 184 LAAP---YHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVD 354
L+AP YH V+DHYENPRNVGSLDK KNVGTGLVGAPACGDVMKLQI+VDE GKIVD
Sbjct: 28 LSAPARLYHKKVVDHYENPRNVGSLDKTSKNVGTGLVGAPACGDVMKLQIQVDEKGKIVD 87
Query: 355 AKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKELSLPPVKLHCSMLAEDAIK 534
A+FKTFGCGSAIASSSLATEWVKGKTV+EAL +KNTDIAKEL LPPVKLHCSMLAEDAIK
Sbjct: 88 ARFKTFGCGSAIASSSLATEWVKGKTVEEALTIKNTDIAKELCLPPVKLHCSMLAEDAIK 147
Query: 535 AALSDYRIKQQTENKE 582
AAL+DY++KQ+ + E
Sbjct: 148 AALADYKLKQEPKKGE 163
>AY009128-1|AAG37428.1| 167|Homo sapiens ISCU2 protein.
Length = 167
Score = 236 bits (578), Expect = 5e-62
Identities = 112/136 (82%), Positives = 123/136 (90%), Gaps = 3/136 (2%)
Frame = +1
Query: 184 LAAP---YHANVIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVD 354
L+AP YH V+DHYENPRNVGSLDK KNVGTGLVGAPACGDVMKLQI+VDE GKIVD
Sbjct: 28 LSAPARLYHKKVVDHYENPRNVGSLDKTSKNVGTGLVGAPACGDVMKLQIQVDEKGKIVD 87
Query: 355 AKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKELSLPPVKLHCSMLAEDAIK 534
A+FKTFGCGSAIASSSLATEWVKGKTV+EAL +KNTDIAKEL LPPVKLHCSMLAEDAIK
Sbjct: 88 ARFKTFGCGSAIASSSLATEWVKGKTVEEALTIKNTDIAKELCLPPVKLHCSMLAEDAIK 147
Query: 535 AALSDYRIKQQTENKE 582
AAL+DY++KQ+ + E
Sbjct: 148 AALADYKLKQEPKKGE 163
>AY009127-1|AAG37427.1| 142|Homo sapiens ISCU1 protein.
Length = 142
Score = 230 bits (563), Expect = 3e-60
Identities = 107/125 (85%), Positives = 117/125 (93%)
Frame = +1
Query: 208 VIDHYENPRNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTFGCGSA 387
V+DHYENPRNVGSLDK KNVGTGLVGAPACGDVMKLQI+VDE GKIVDA+FKTFGCGSA
Sbjct: 14 VVDHYENPRNVGSLDKTSKNVGTGLVGAPACGDVMKLQIQVDEKGKIVDARFKTFGCGSA 73
Query: 388 IASSSLATEWVKGKTVDEALKLKNTDIAKELSLPPVKLHCSMLAEDAIKAALSDYRIKQQ 567
IASSSLATEWVKGKTV+EAL +KNTDIAKEL LPPVKLHCSMLAEDAIKAAL+DY++KQ+
Sbjct: 74 IASSSLATEWVKGKTVEEALTIKNTDIAKELCLPPVKLHCSMLAEDAIKAALADYKLKQE 133
Query: 568 TENKE 582
+ E
Sbjct: 134 PKKGE 138
>U47101-1|AAC50885.1| 121|Homo sapiens NifU-like protein protein.
Length = 121
Score = 212 bits (517), Expect = 1e-54
Identities = 100/117 (85%), Positives = 109/117 (93%)
Frame = +1
Query: 232 RNVGSLDKKDKNVGTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLAT 411
RNVGSLDK KNVGTGLVGAPACGDVMKLQI+VDE GKIVDA+FKTFGCGSAIASSSLAT
Sbjct: 1 RNVGSLDKTSKNVGTGLVGAPACGDVMKLQIQVDEKGKIVDARFKTFGCGSAIASSSLAT 60
Query: 412 EWVKGKTVDEALKLKNTDIAKELSLPPVKLHCSMLAEDAIKAALSDYRIKQQTENKE 582
EWVKGKTV+EAL +KNTDIAKEL LPPVKLHCSMLAEDAIKAAL+DY++KQ+ + E
Sbjct: 61 EWVKGKTVEEALTIKNTDIAKELCLPPVKLHCSMLAEDAIKAALADYKLKQEPKKGE 117
>AL022152-2|CAD27434.1| 1142|Homo sapiens melanoma antigen family C,
1 protein.
Length = 1142
Score = 31.1 bits (67), Expect = 4.1
Identities = 27/85 (31%), Positives = 37/85 (43%)
Frame = -3
Query: 536 ALIASSASIEQ*SLTGGKDSSLAISVFFNFSASSTVFPLTHSVARELEAIAEPHPKVLNL 357
+L SS Q + G S L I V + S+SST+ L S + E P+ L
Sbjct: 282 SLFQSSPERTQSTFEGFPQSPLQIPV--SSSSSSTLLSLFQSSPERTHSTFEGFPQSLLQ 339
Query: 356 ASTIFPFSSTLICNFITSPHAGAPT 282
FSSTL+ F +SP + T
Sbjct: 340 IPMTSSFSSTLLSIFQSSPESAQST 364
>AF064589-1|AAC18837.1| 1142|Homo sapiens melanoma-associated
antigen protein.
Length = 1142
Score = 31.1 bits (67), Expect = 4.1
Identities = 26/85 (30%), Positives = 38/85 (44%)
Frame = -3
Query: 536 ALIASSASIEQ*SLTGGKDSSLAISVFFNFSASSTVFPLTHSVARELEAIAEPHPKVLNL 357
++ SS Q + G S L I V + S+SST+ L S ++ E P+ L
Sbjct: 282 SIFQSSPERTQSTFEGFAQSPLQIPV--SSSSSSTLLSLFQSSPERTQSTFEGFPQSLLQ 339
Query: 356 ASTIFPFSSTLICNFITSPHAGAPT 282
FSSTL+ F +SP + T
Sbjct: 340 IPMTSSFSSTLLSIFQSSPESAQST 364
>AL022152-1|CAI42087.1| 118|Homo sapiens melanoma antigen family C,
1 protein.
Length = 118
Score = 29.9 bits (64), Expect = 9.5
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = -3
Query: 536 ALIASSASIEQ*SLTGGKDSSLAISVFFNFSASSTVFPLTHSVARELEAIAEPHPKVLNL 357
+L+ SS+ Q S G+DS + + + S+SST+ L S + ++ E + +L
Sbjct: 13 SLLQSSSESPQ-SCPEGEDSQSPLQIPVSPSSSSTLLSLFQSFSERTQSTFEGFAQ-SSL 70
Query: 356 ASTIFP-FSSTLICNFITSP 300
+ P FSSTL+ F +SP
Sbjct: 71 QIPVSPSFSSTLVSLFQSSP 90
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,361,323
Number of Sequences: 237096
Number of extensions: 1844243
Number of successful extensions: 3567
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3567
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8399192100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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