Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11a02
(733 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 400 e-112
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 398 e-111
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 396 e-111
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 396 e-111
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 396 e-111
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 394 e-110
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 394 e-110
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 393 e-110
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 393 e-110
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 204 5e-53
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 204 5e-53
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 203 8e-53
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 203 8e-53
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 202 3e-52
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 201 4e-52
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 201 4e-52
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 158 3e-39
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 157 5e-39
At4g37190.1 68417.m05265 expressed protein 33 0.20
At1g68720.1 68414.m07851 cytidine/deoxycytidylate deaminase fami... 32 0.45
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 30 1.4
At1g66730.1 68414.m07585 ATP dependent DNA ligase family protein... 29 4.2
At1g55690.3 68414.m06377 SEC14 cytosolic factor family protein /... 29 4.2
At1g55690.2 68414.m06376 SEC14 cytosolic factor family protein /... 29 4.2
At1g55690.1 68414.m06375 SEC14 cytosolic factor family protein /... 29 4.2
At5g45380.1 68418.m05577 sodium:solute symporter family protein ... 28 7.3
At4g20990.1 68417.m03038 carbonic anhydrase family protein simil... 28 7.3
At1g67530.1 68414.m07694 armadillo/beta-catenin repeat family pr... 28 7.3
At1g46984.1 68414.m05220 F-box protein-related contains weak hit... 28 7.3
At1g27070.1 68414.m03300 5'-AMP-activated protein kinase-related... 28 7.3
At2g33640.1 68415.m04124 zinc finger (DHHC type) family protein ... 27 9.7
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 400 bits (984), Expect = e-112
Identities = 182/227 (80%), Positives = 200/227 (88%), Gaps = 1/227 (0%)
Frame = +2
Query: 56 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDS-DLQLERINVYYNEATGGKY 232
MREI+H+QGGQCGNQIG+KFWEVI DEHG+DPTG Y+GDS DLQLERINVYYNEA+GG+Y
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 233 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 412
VPRA+L+DLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 413 VRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDTV 592
VRKEAE CDCLQGFQ ISKIREEYPDR+M TFSV PSPKVSDTV
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 180
Query: 593 VEPYNATLSVHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLN 733
VEPYNATLSVHQLVEN DE +DNEALYDICFRTLKL+TP++GDLN
Sbjct: 181 VEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLN 227
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 398 bits (980), Expect = e-111
Identities = 182/226 (80%), Positives = 198/226 (87%)
Frame = +2
Query: 56 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 235
MREI+HIQGGQCGNQIG+KFWEV+ DEHGIDPTG Y G+SDLQLER+NVYYNEA+ G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 236 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 415
PRAIL+DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVV
Sbjct: 61 PRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
Query: 416 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDTVV 595
RKEAE CDCLQGFQ ISKIREEYPDR+M TFSV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 596 EPYNATLSVHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLN 733
EPYNATLSVHQLVEN DE +DNEALYDICFRTLKLTTP++GDLN
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLN 226
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 396 bits (976), Expect = e-111
Identities = 183/227 (80%), Positives = 198/227 (87%), Gaps = 1/227 (0%)
Frame = +2
Query: 56 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDS-DLQLERINVYYNEATGGKY 232
MREI+HIQGGQCGNQIG+KFWEVI DEHGID TG Y GD+ DLQLERINVYYNEA+GG+Y
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 233 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 412
VPRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 413 VRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDTV 592
VRKEAE CDCLQGFQ ISKIREEYPDR+M TFSV PSPKVSDTV
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 180
Query: 593 VEPYNATLSVHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLN 733
VEPYNATLSVHQLVEN DE +DNEALYDICFRTLKL+TP++GDLN
Sbjct: 181 VEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLN 227
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 396 bits (975), Expect = e-111
Identities = 182/226 (80%), Positives = 196/226 (86%)
Frame = +2
Query: 56 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 235
MREI+HIQGGQCGNQIGAKFWEV+ EHGIDPTG Y GDSDLQLERINVYYNEA+ G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 236 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 415
PRA+L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 416 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDTVV 595
RKEAE CDCLQGFQ ISKIREEYPDR+M TFSV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 596 EPYNATLSVHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLN 733
EPYNATLSVHQLVEN DE +DNEALYDICFRTLKLTTP++GDLN
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLN 226
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 396 bits (975), Expect = e-111
Identities = 182/226 (80%), Positives = 196/226 (86%)
Frame = +2
Query: 56 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 235
MREI+HIQGGQCGNQIGAKFWEV+ EHGIDPTG Y GDSDLQLERINVYYNEA+ G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 236 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 415
PRA+L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 416 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDTVV 595
RKEAE CDCLQGFQ ISKIREEYPDR+M TFSV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 596 EPYNATLSVHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLN 733
EPYNATLSVHQLVEN DE +DNEALYDICFRTLKLTTP++GDLN
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLN 226
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 394 bits (971), Expect = e-110
Identities = 183/226 (80%), Positives = 194/226 (85%)
Frame = +2
Query: 56 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 235
MREI+HIQGGQCGNQIGAKFWEVI EHGID TG GD+DLQLERINVY+NEA+GGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 236 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 415
PRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 416 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDTVV 595
RKEAE CDCLQGFQ ISKIREEYPDR+M TFSV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVV 180
Query: 596 EPYNATLSVHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLN 733
EPYNATLSVHQLVEN DE +DNEALYDICFRTLKL PT+GDLN
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLANPTFGDLN 226
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 394 bits (969), Expect = e-110
Identities = 180/226 (79%), Positives = 196/226 (86%)
Frame = +2
Query: 56 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 235
MREI+HIQGGQCGNQIGAKFWEV+ EHGID TG Y G++DLQLER+NVYYNEA+ G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 236 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 415
PRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 416 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDTVV 595
RKEAE CDCLQGFQ ISKIREEYPDR+M TFSV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 596 EPYNATLSVHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLN 733
EPYNATLSVHQLVEN DE +DNEALYDICFRTLKLTTP++GDLN
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLN 226
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 393 bits (967), Expect = e-110
Identities = 183/226 (80%), Positives = 194/226 (85%)
Frame = +2
Query: 56 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 235
MREI+HIQGGQCGNQIGAKFWEVI DEHGID TG Y GDS LQLERI+VY+NEA+GGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 236 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 415
PRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 416 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDTVV 595
RKEAE DCLQGFQ ISKIREEYPDR+M TFSV PSPKVSDTVV
Sbjct: 121 RKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVV 180
Query: 596 EPYNATLSVHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLN 733
EPYNATLSVHQLVEN DE +DNEALYDICFRTLKL PT+GDLN
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLANPTFGDLN 226
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 393 bits (967), Expect = e-110
Identities = 180/226 (79%), Positives = 197/226 (87%)
Frame = +2
Query: 56 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 235
MREI+HIQGGQCGNQIG+KFWEV++ EHGID TG Y GDS+LQLER+NVYYNEA+ G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 236 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 415
PRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 416 RKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDTVV 595
RKEAE CDCLQGFQ ISKIREEYPDR+M TFSV PSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVV 180
Query: 596 EPYNATLSVHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLN 733
EPYNATLSVHQLVEN DE +DNEALYDICFRTLKL+TP++GDLN
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLN 226
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 204 bits (498), Expect = 5e-53
Identities = 98/228 (42%), Positives = 138/228 (60%), Gaps = 2/228 (0%)
Frame = +2
Query: 56 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 229
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 230 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 409
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 410 VVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDT 589
VRK A+ C LQGF + ++ +Y + F++ PSP+VS
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
Query: 590 VVEPYNATLSVHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLN 733
VVEPYN+ LS H L+E+TD + +DNEA+YDIC R+L + PTY +LN
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLN 228
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 204 bits (498), Expect = 5e-53
Identities = 98/228 (42%), Positives = 138/228 (60%), Gaps = 2/228 (0%)
Frame = +2
Query: 56 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 229
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 230 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 409
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 410 VVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDT 589
VRK A+ C LQGF + ++ +Y + F++ PSP+VS
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
Query: 590 VVEPYNATLSVHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLN 733
VVEPYN+ LS H L+E+TD + +DNEA+YDIC R+L + PTY +LN
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLN 228
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 203 bits (496), Expect = 8e-53
Identities = 99/228 (43%), Positives = 137/228 (60%), Gaps = 2/228 (0%)
Frame = +2
Query: 56 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 229
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 230 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 409
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 410 VVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDT 589
+RK A+ C LQGF + ++ +Y + F+V PSP+VS +
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 590 VVEPYNATLSVHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLN 733
VVEPYN+ LS H L+E+TD S +DNEA+YDIC R+L + PTY +LN
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLNIERPTYTNLN 228
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 203 bits (496), Expect = 8e-53
Identities = 99/228 (43%), Positives = 137/228 (60%), Gaps = 2/228 (0%)
Frame = +2
Query: 56 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 229
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 230 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 409
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 410 VVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDT 589
+RK A+ C LQGF + ++ +Y + F+V PSP+VS +
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 590 VVEPYNATLSVHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLN 733
VVEPYN+ LS H L+E+TD S +DNEA+YDIC R+L + PTY +LN
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLNIERPTYTNLN 228
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 202 bits (492), Expect = 3e-52
Identities = 95/228 (41%), Positives = 139/228 (60%), Gaps = 2/228 (0%)
Frame = +2
Query: 56 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 229
MREI+ I GQ G Q+G WE+ EHGI P GT DS + + N +++E + G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 230 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 409
+VPRA+ +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD+ L+
Sbjct: 61 HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLE 120
Query: 410 VVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDT 589
+RK A+ C LQGF + ++ ++ + F++ PSP+VS
Sbjct: 121 RLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKLGFTIYPSPQVSTA 180
Query: 590 VVEPYNATLSVHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLN 733
VVEPYN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +LN
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYSNLN 228
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 201 bits (490), Expect = 4e-52
Identities = 98/228 (42%), Positives = 136/228 (59%), Gaps = 2/228 (0%)
Frame = +2
Query: 56 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 229
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 230 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 409
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 410 VVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDT 589
+RK A+ C LQGF + ++ +Y + F+V PSP+VS +
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 590 VVEPYNATLSVHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLN 733
VVEPYN+ LS H L+E+TD S +DNEA+YDIC R+L + PTY +LN
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLSIERPTYTNLN 228
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 201 bits (490), Expect = 4e-52
Identities = 98/228 (42%), Positives = 136/228 (59%), Gaps = 2/228 (0%)
Frame = +2
Query: 56 MREIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 229
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 230 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 409
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 410 VVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSPKVSDT 589
+RK A+ C LQGF + ++ +Y + F+V PSP+VS +
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 590 VVEPYNATLSVHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLN 733
VVEPYN+ LS H L+E+TD S +DNEA+YDIC R+L + PTY +LN
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLSIERPTYTNLN 228
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 158 bits (384), Expect = 3e-39
Identities = 78/228 (34%), Positives = 127/228 (55%), Gaps = 3/228 (1%)
Frame = +2
Query: 59 REIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVP 238
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 239 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 412
RA+L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D+
Sbjct: 63 RALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMDM 121
Query: 413 VRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSP-KVSDT 589
+ +EA+G D L+GF + + + Y +++ T+SV P+ + SD
Sbjct: 122 IDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDV 181
Query: 590 VVEPYNATLSVHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLN 733
VV+PYN+ L++ +L N D +DN AL I L LT PT+ N
Sbjct: 182 VVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLTNPTFAQTN 229
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 157 bits (382), Expect = 5e-39
Identities = 78/228 (34%), Positives = 127/228 (55%), Gaps = 3/228 (1%)
Frame = +2
Query: 59 REIVHIQGGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVP 238
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 239 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 412
RA+L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D+
Sbjct: 63 RALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMDM 121
Query: 413 VRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXISKIREEYPDRIMNTFSVVPSP-KVSDT 589
+ +EA+G D L+GF + + + Y +++ T+SV P+ + SD
Sbjct: 122 IDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDV 181
Query: 590 VVEPYNATLSVHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLN 733
VV+PYN+ L++ +L N D +DN AL I L LT PT+ N
Sbjct: 182 VVQPYNSLLTLKRLTLNADCVVVLDNTALGRIAVERLHLTNPTFAQTN 229
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 33.1 bits (72), Expect = 0.20
Identities = 29/84 (34%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Frame = +2
Query: 56 MREIVHIQGGQCGNQIGAKFWEVISDEHGI------DPTGTYHG-DSDLQLERINVYYNE 214
MREIV IQ G+ N +G+ FW + G+ DP H D D+
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGLASDPESDPIFRNHNLDMDVLYRSGETQQGV 60
Query: 215 ATGGKYVPRAILVDLEP--GTMDS 280
AT Y PR + V+L+ GTM S
Sbjct: 61 AT---YTPRLVSVNLKGALGTMSS 81
>At1g68720.1 68414.m07851 cytidine/deoxycytidylate deaminase family
protein contains Pfam profile PF00383: Cytidine and
deoxycytidylate deaminase zinc-binding region
Length = 1307
Score = 31.9 bits (69), Expect = 0.45
Identities = 23/88 (26%), Positives = 38/88 (43%)
Frame = -1
Query: 376 GVVTLSPVVASTRLPKDKVVRTEDLTEWSGAYRVHCPGL*VHKDSPRHVLSSSRLVIVHV 197
G V+ + +L ++K V + EW AY+V V + R L ++
Sbjct: 1069 GSVSADSALIQRKLQRNKQVVRDSFEEWEEAYKVEAERRTVDEIFMREALVEAKKA---A 1125
Query: 196 DALQLEVGVSVIRSGRIDAMLIGYNFPE 113
D ++ VG ++ G+I A GYN E
Sbjct: 1126 DTWEVPVGAVLVHDGKIIAR--GYNLVE 1151
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +2
Query: 389 LVDSVLDVVRKEAEGCDCLQGF 454
+++SV VVRKEAE C+CLQ F
Sbjct: 1 MINSV-GVVRKEAENCNCLQVF 21
>At1g66730.1 68414.m07585 ATP dependent DNA ligase family protein
contains Pfam profile: PF01068 ATP dependent DNA ligase
domain
Length = 1417
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +3
Query: 75 SKEVNAETRLGLSSGKLYPMSMASIRPERITETPTSS 185
S N+ET L L++ KLY +++SI P+ + PTSS
Sbjct: 15 SNSDNSET-LNLNTTKLYSSAISSISPQFPSPKPTSS 50
>At1g55690.3 68414.m06377 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
similar to phosphatidylinositol transfer-like protein IV
(GI:14486707) [Lotus japonicus] and Phosphatidylinositol
Transfer Protein GB:2780955 GI:2780955 [Saccharomyces
cerevisiae]
Length = 621
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = -1
Query: 124 NFPELSPNLVSALTSLDMNYFPHFFCKLY 38
NF + NLV+A++ +D +Y+P ++Y
Sbjct: 230 NFTPTAANLVAAMSKIDNSYYPETLHRMY 258
>At1g55690.2 68414.m06376 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
similar to phosphatidylinositol transfer-like protein IV
(GI:14486707) [Lotus japonicus] and Phosphatidylinositol
Transfer Protein GB:2780955 GI:2780955 [Saccharomyces
cerevisiae]
Length = 625
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = -1
Query: 124 NFPELSPNLVSALTSLDMNYFPHFFCKLY 38
NF + NLV+A++ +D +Y+P ++Y
Sbjct: 230 NFTPTAANLVAAMSKIDNSYYPETLHRMY 258
>At1g55690.1 68414.m06375 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
similar to phosphatidylinositol transfer-like protein IV
(GI:14486707) [Lotus japonicus] and Phosphatidylinositol
Transfer Protein GB:2780955 GI:2780955 [Saccharomyces
cerevisiae]
Length = 625
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = -1
Query: 124 NFPELSPNLVSALTSLDMNYFPHFFCKLY 38
NF + NLV+A++ +D +Y+P ++Y
Sbjct: 230 NFTPTAANLVAAMSKIDNSYYPETLHRMY 258
>At5g45380.1 68418.m05577 sodium:solute symporter family protein
contains Pfam profile: PF00474 sodium:solute symporter
family
Length = 694
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -1
Query: 154 GRIDAMLIGYNFPELSPNLVSALTSLDMNY 65
GR+D G N P L+ NLV+ LT NY
Sbjct: 513 GRVDLDSTGKNGPMLAGNLVAILTVRPQNY 542
>At4g20990.1 68417.m03038 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 267
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +2
Query: 104 GAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAILV 253
G + W I+ + TG Y DL ER+++ +++A +Y P ++
Sbjct: 45 GPEGWGKINPHWKVCNTGRYQSPIDLTNERVSLIHDQAWTRQYKPAPAVI 94
>At1g67530.1 68414.m07694 armadillo/beta-catenin repeat family
protein / U-box domain-containing family protein
contains Pfam domain, PF00514:
Armadillo/beta-catenin-like repeats and Pfam, PF04564:
U-box domain
Length = 782
Score = 27.9 bits (59), Expect = 7.3
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = -1
Query: 247 DSPRHVLSSSRLVIVHVDALQLEVGVSVIRSGRIDAMLIGYNFPELSPNLVSALTS 80
D + V+ SS+ V V LQ E+ ++DA+ YN SPN+ + L+S
Sbjct: 541 DEAKSVIGSSQAVPFLVQLLQKEIETQC----KLDALHALYNLSTYSPNIPALLSS 592
>At1g46984.1 68414.m05220 F-box protein-related contains weak hit to
Pfam PF00646: F-box domain; contains weak hit to TIGRFAM
TIGR01640 : F-box protein interaction domain
Length = 370
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 220 WRKVRASGYPCGPRARDNGLC 282
WRK+ S YP PR + NG+C
Sbjct: 202 WRKIEYS-YPHYPRKKSNGIC 221
>At1g27070.1 68414.m03300 5'-AMP-activated protein kinase-related
contains weak similarity to Swiss-Prot:Q9QZH4
5'-AMP-activated protein kinase, beta-2 subunit (AMPK
beta-2 chain) [Rattus norvegicus]
Length = 532
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = -1
Query: 412 YIEHRIYQLCAFGVVTLSPVVASTRLPKDKVVRTEDLTEWSG 287
+I+HR+ QL + LS V+ S R P DKVV ++D +G
Sbjct: 350 HIKHRLQQLQS----ELSSVLHSLRSPPDKVVTSKDSETTAG 387
>At2g33640.1 68415.m04124 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 565
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = -1
Query: 448 LQTVATFSFFSDYIEHRIYQLCAFGV 371
L TVA ++FF+ ++ +++Y+ A GV
Sbjct: 24 LLTVAYYAFFAPFLGNKLYEYIAIGV 49
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,604,850
Number of Sequences: 28952
Number of extensions: 360678
Number of successful extensions: 1014
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 983
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1604469728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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