Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10p23
         (693 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY204187-1|AAO39191.1|  156|Caenorhabditis elegans nuclear recep...    28   5.5  
AL032639-1|CAA21638.1|  373|Caenorhabditis elegans Hypothetical ...    28   5.5  
AF016438-9|AAB65891.2|  394|Caenorhabditis elegans Nuclear hormo...    28   5.5  
Z81101-6|CAE53732.1|  840|Caenorhabditis elegans Hypothetical pr...    27   9.6  
Z81101-5|CAB03199.3|  705|Caenorhabditis elegans Hypothetical pr...    27   9.6  
L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclas...    27   9.6  
AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical ...    27   9.6  
AB125702-1|BAD01496.1|  705|Caenorhabditis elegans D2-like dopam...    27   9.6  
AB125701-1|BAD01495.1|  840|Caenorhabditis elegans D2-like dopam...    27   9.6  

>AY204187-1|AAO39191.1|  156|Caenorhabditis elegans nuclear receptor
           NHR-103 protein.
          Length = 156

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +2

Query: 170 STWYSRRMQCVTDACVVFKLSVITCVTFRLNE 265
           +TW  +++QCV   C +F+     C   RL +
Sbjct: 39  ATWSRKKVQCVKGTCKIFEDGKFNCKQCRLKK 70


>AL032639-1|CAA21638.1|  373|Caenorhabditis elegans Hypothetical
           protein F18A11.5 protein.
          Length = 373

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 11/33 (33%), Positives = 23/33 (69%)
 Frame = +3

Query: 549 EAPHHRIPLPHVAGHRVRVVLDQCIRNQTDTSS 647
           +A ++ IP+P+V G  +++V+  CIR++ +  S
Sbjct: 263 KASNYVIPVPNVKGITMKMVVTWCIRHRVEVPS 295


>AF016438-9|AAB65891.2|  394|Caenorhabditis elegans Nuclear hormone
           receptor familyprotein 103 protein.
          Length = 394

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +2

Query: 170 STWYSRRMQCVTDACVVFKLSVITCVTFRLNE 265
           +TW  +++QCV   C +F+     C   RL +
Sbjct: 39  ATWSRKKVQCVKGTCKIFEDGKFNCKQCRLKK 70


>Z81101-6|CAE53732.1|  840|Caenorhabditis elegans Hypothetical
           protein K09G1.4b protein.
          Length = 840

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 394 LSNVTVDHVDILEPDVNYYDANFYNAFF 477
           L++  V  V++  PD N Y+  FYNA F
Sbjct: 170 LASPMVFGVNVRPPDANPYECRFYNAEF 197


>Z81101-5|CAB03199.3|  705|Caenorhabditis elegans Hypothetical
           protein K09G1.4a protein.
          Length = 705

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 394 LSNVTVDHVDILEPDVNYYDANFYNAFF 477
           L++  V  V++  PD N Y+  FYNA F
Sbjct: 170 LASPMVFGVNVRPPDANPYECRFYNAEF 197


>L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclase
           protein.
          Length = 1276

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -1

Query: 270 HYSFKRKVTHVIT-DNLNTTQASVTHCIRLLYQVEIYFNT*N*TYK 136
           ++  +R V  VI  D    T A+ +HC   LY ++ YF   + T+K
Sbjct: 208 YHDKRRAVNRVIAQDESQETGATSSHCYFSLYAIKRYFTEKSKTFK 253


>AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical
           protein T01A4.1c protein.
          Length = 1276

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -1

Query: 270 HYSFKRKVTHVIT-DNLNTTQASVTHCIRLLYQVEIYFNT*N*TYK 136
           ++  +R V  VI  D    T A+ +HC   LY ++ YF   + T+K
Sbjct: 208 YHDKRRAVNRVIAQDESQETGATSSHCYFSLYAIKRYFTEKSKTFK 253


>AB125702-1|BAD01496.1|  705|Caenorhabditis elegans D2-like dopamine
           receptor shortvariant protein.
          Length = 705

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 394 LSNVTVDHVDILEPDVNYYDANFYNAFF 477
           L++  V  V++  PD N Y+  FYNA F
Sbjct: 170 LASPMVFGVNVRPPDANPYECRFYNAEF 197


>AB125701-1|BAD01495.1|  840|Caenorhabditis elegans D2-like dopamine
           receptor longvariant protein.
          Length = 840

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 394 LSNVTVDHVDILEPDVNYYDANFYNAFF 477
           L++  V  V++  PD N Y+  FYNA F
Sbjct: 170 LASPMVFGVNVRPPDANPYECRFYNAEF 197


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,313,167
Number of Sequences: 27780
Number of extensions: 310107
Number of successful extensions: 958
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 958
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)