BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmte10p21 (496 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 01_05_0037 - 17452503-17452523,17452594-17452689,17453315-174534... 31 0.67 04_01_0213 - 2692253-2694562 30 1.2 10_08_0411 - 17725661-17725842,17726066-17726104,17726379-177264... 29 1.6 08_02_1531 + 27674064-27674771 29 2.1 07_03_1545 - 27599605-27599859,27600012-27600123,27600216-27600478 29 2.1 06_01_0975 - 7566280-7566461,7567004-7567132,7567203-7567236,756... 28 3.6 03_01_0067 - 538929-539143,539306-539344,539579-539635,539727-53... 28 3.6 08_02_1532 + 27675824-27676531 28 4.7 04_03_0318 + 14296001-14296630 28 4.7 10_04_0022 + 7687383-7687670,7688479-7688556,7689456-7689535,768... 27 6.3 08_02_0059 - 11778739-11780998,11781744-11781751 27 8.3 06_03_1085 + 27491735-27492754,27492854-27492978,27493088-274932... 27 8.3 >01_05_0037 - 17452503-17452523,17452594-17452689,17453315-17453419, 17453699-17453869,17454309-17454378,17454698-17454879, 17457297-17457406,17458353-17458457,17458537-17458615, 17458722-17458762,17459019-17459097,17460620-17460814 Length = 417 Score = 30.7 bits (66), Expect = 0.67 Identities = 17/51 (33%), Positives = 29/51 (56%) Frame = -1 Query: 307 NSSTFFFCSAAILLITSFNLFMSILXISGTPSNNFRAFSSEAFTSSIILES 155 ++STFF A+ L + + ++I+ ISGT N +F+ + SS+ L S Sbjct: 288 DASTFFLLENALALFIALLVNVAIVSISGTICANNLSFADTSTCSSLTLNS 338 >04_01_0213 - 2692253-2694562 Length = 769 Score = 29.9 bits (64), Expect = 1.2 Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Frame = +3 Query: 195 KARKLFEGVPDIXN-IDINKLKEVINKMAAEQKKNVEELTTMLEKQP 332 K R L+EG N I N+L+ +N + E KKN+ +L EKQP Sbjct: 560 KLRSLYEGALKALNEIKGNQLQSSVNN-SVEGKKNLAQLLIDKEKQP 605 >10_08_0411 - 17725661-17725842,17726066-17726104,17726379-17726435, 17726524-17726672,17727195-17727262,17727796-17727798 Length = 165 Score = 29.5 bits (63), Expect = 1.6 Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%) Frame = +3 Query: 105 LQKDGKNSVDNI--IKWMKDSKIID----EVKASEEKARKLFEGVPDIXNIDINKLKEVI 266 L++ G N++ I + KD +I +V+AS + G P + + L +I Sbjct: 44 LKRVGVNTIPGIEEVNIFKDDVVIQFLNPKVQASIGANTWVVSGTPQTKKLQ-DLLPSII 102 Query: 267 NKMAAEQKKNVEELTTMLEKQPPKVLDALQAGASA 371 N++ + N+ L +KQ P +AGASA Sbjct: 103 NQLGPDNLDNLRRLAEQFQKQAPGA-SGEEAGASA 136 >08_02_1531 + 27674064-27674771 Length = 235 Score = 29.1 bits (62), Expect = 2.1 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Frame = +3 Query: 99 EKLQKDGKNSVDNIIKWMKDSKIIDEVKASEEKARKLFEGVPDIXNIDINKLK-EVINKM 275 +K +K K +V + +DSK++ + + E LFE D+ + I K +I+K Sbjct: 128 KKAKKHSKKTVKKVASDKEDSKMVKLLSNAREITTSLFESTLDLLSKQIAMPKFSLISK- 186 Query: 276 AAEQKKN 296 A QKKN Sbjct: 187 -AFQKKN 192 >07_03_1545 - 27599605-27599859,27600012-27600123,27600216-27600478 Length = 209 Score = 29.1 bits (62), Expect = 2.1 Identities = 14/51 (27%), Positives = 28/51 (54%) Frame = +3 Query: 183 ASEEKARKLFEGVPDIXNIDINKLKEVINKMAAEQKKNVEELTTMLEKQPP 335 A+E + KL+E VP++ + +N + + + A + V+ L +L +PP Sbjct: 30 AAESSSAKLYEDVPEMPLMALNHISRLCKSIDASVRFYVKALGFVLIHRPP 80 >06_01_0975 - 7566280-7566461,7567004-7567132,7567203-7567236, 7567347-7567579,7568526-7568587,7568704-7568761, 7568856-7568922,7569016-7569063 Length = 270 Score = 28.3 bits (60), Expect = 3.6 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Frame = +3 Query: 195 KARKLF-EGVPDIXNIDINKLKEVINKMAAEQKKNVEELTTMLEKQPPKVLDA 350 K RKL EG+ DIN+L++ + AE + E L L ++ ++++A Sbjct: 16 KKRKLLDEGLDQKRAADINELRQAMKDWVAELQSENERLVAKLTQKEQQLVEA 68 >03_01_0067 - 538929-539143,539306-539344,539579-539635,539727-539875, 540298-540365,542009-542093,542185-542246,542612-542700, 543034-543088,544127-544252,544477-544576,544697-545499 Length = 615 Score = 28.3 bits (60), Expect = 3.6 Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 6/98 (6%) Frame = +3 Query: 105 LQKDGKNSVDNI--IKWMKDSKIID----EVKASEEKARKLFEGVPDIXNIDINKLKEVI 266 L++ G N++ I + KD +I +V+AS + G P + + L +I Sbjct: 483 LKRVGVNNIPGIEEVNIFKDDVVIQFQNPKVQASIGANTWVVSGTPQTKKLQ-DLLPTII 541 Query: 267 NKMAAEQKKNVEELTTMLEKQPPKVLDALQAGASAFKA 380 N++ + N+ L +KQ P +AGASA A Sbjct: 542 NQLGPDNLDNLRRLAEQFQKQVP----GAEAGASAGNA 575 >08_02_1532 + 27675824-27676531 Length = 235 Score = 27.9 bits (59), Expect = 4.7 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Frame = +3 Query: 99 EKLQKDGKNSVDNIIKWMKDSKIIDEVKASEEKARKLFEGVPDIXNIDINKLK-EVINKM 275 +K +K K +V + M+DSK + + + + LFE D+ + I K +I+K Sbjct: 128 KKAKKHSKKTVKKVASDMEDSKKVKLLSNARQITTSLFESTLDLLSKQIVLPKLSLISK- 186 Query: 276 AAEQKKN 296 A QKKN Sbjct: 187 -AFQKKN 192 >04_03_0318 + 14296001-14296630 Length = 209 Score = 27.9 bits (59), Expect = 4.7 Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Frame = +3 Query: 159 SKIIDEVKASEEKAR-KLFEGVPDIXNIDINKLKEVINKMAAEQKKNVEEL 308 +++++ KA R K + DI N +NKLKE ++K+ + ++ +L Sbjct: 61 TRVLEHFKAMPHLVRYKKMTDLEDILNEQVNKLKEQLHKVGRDADESETKL 111 >10_04_0022 + 7687383-7687670,7688479-7688556,7689456-7689535, 7689876-7690095,7690444-7690677 Length = 299 Score = 27.5 bits (58), Expect = 6.3 Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 3/87 (3%) Frame = +3 Query: 99 EKLQKDGKNSV-DNIIKWMKDSKIIDEVKAS-EEKARKLFEGVP-DIXNIDINKLKEVIN 269 E+L + + S+ N+ + I +E+K EE ++LF+ V + L+E + Sbjct: 161 EELARRVEESIRKNVEDRLNSEDIKNEIKRRVEEGIKQLFDEVDAQLQKEKETALREARH 220 Query: 270 KMAAEQKKNVEELTTMLEKQPPKVLDA 350 K A ++++ EEL MLE+ KV +A Sbjct: 221 K-AEQERREREELDRMLEENRRKVEEA 246 >08_02_0059 - 11778739-11780998,11781744-11781751 Length = 755 Score = 27.1 bits (57), Expect = 8.3 Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 10/91 (10%) Frame = +3 Query: 135 NIIKWMKDSKIID---EVKASEEKARKLFEGVPDIXNIDINKLK-------EVINKMAAE 284 ++++ M + K++D + K EEKARKL + + ++ N+ LK + + + Sbjct: 542 SMLRRMVNLKLLDVTIQEKLKEEKARKLSDNLNNLNNLTTLILKGVDLPISSIFTAPSLQ 601 Query: 285 QKKNVEELTTMLEKQPPKVLDALQAGASAFK 377 K +E T+L P +D + S F+ Sbjct: 602 FLKTIELTGTILLTTPSPEIDKMTTSPSDFQ 632 >06_03_1085 + 27491735-27492754,27492854-27492978,27493088-27493232, 27493328-27493591 Length = 517 Score = 27.1 bits (57), Expect = 8.3 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 5/56 (8%) Frame = +3 Query: 153 KDSKIIDEVKASEEKA-----RKLFEGVPDIXNIDINKLKEVINKMAAEQKKNVEE 305 ++S +D++K E KA K+ E + D D K++ AAE++K VEE Sbjct: 49 EESNFLDDLKDGERKALAELRAKVEEAIVDGKLFDDGKVEAKKKAAAAEEEKAVEE 104 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 10,318,837 Number of Sequences: 37544 Number of extensions: 168470 Number of successful extensions: 497 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 489 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 497 length of database: 14,793,348 effective HSP length: 77 effective length of database: 11,902,460 effective search space used: 1035514020 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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