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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10p21
         (496 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0037 - 17452503-17452523,17452594-17452689,17453315-174534...    31   0.67 
04_01_0213 - 2692253-2694562                                           30   1.2  
10_08_0411 - 17725661-17725842,17726066-17726104,17726379-177264...    29   1.6  
08_02_1531 + 27674064-27674771                                         29   2.1  
07_03_1545 - 27599605-27599859,27600012-27600123,27600216-27600478     29   2.1  
06_01_0975 - 7566280-7566461,7567004-7567132,7567203-7567236,756...    28   3.6  
03_01_0067 - 538929-539143,539306-539344,539579-539635,539727-53...    28   3.6  
08_02_1532 + 27675824-27676531                                         28   4.7  
04_03_0318 + 14296001-14296630                                         28   4.7  
10_04_0022 + 7687383-7687670,7688479-7688556,7689456-7689535,768...    27   6.3  
08_02_0059 - 11778739-11780998,11781744-11781751                       27   8.3  
06_03_1085 + 27491735-27492754,27492854-27492978,27493088-274932...    27   8.3  

>01_05_0037 -
           17452503-17452523,17452594-17452689,17453315-17453419,
           17453699-17453869,17454309-17454378,17454698-17454879,
           17457297-17457406,17458353-17458457,17458537-17458615,
           17458722-17458762,17459019-17459097,17460620-17460814
          Length = 417

 Score = 30.7 bits (66), Expect = 0.67
 Identities = 17/51 (33%), Positives = 29/51 (56%)
 Frame = -1

Query: 307 NSSTFFFCSAAILLITSFNLFMSILXISGTPSNNFRAFSSEAFTSSIILES 155
           ++STFF    A+ L  +  + ++I+ ISGT   N  +F+  +  SS+ L S
Sbjct: 288 DASTFFLLENALALFIALLVNVAIVSISGTICANNLSFADTSTCSSLTLNS 338


>04_01_0213 - 2692253-2694562
          Length = 769

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +3

Query: 195 KARKLFEGVPDIXN-IDINKLKEVINKMAAEQKKNVEELTTMLEKQP 332
           K R L+EG     N I  N+L+  +N  + E KKN+ +L    EKQP
Sbjct: 560 KLRSLYEGALKALNEIKGNQLQSSVNN-SVEGKKNLAQLLIDKEKQP 605


>10_08_0411 -
           17725661-17725842,17726066-17726104,17726379-17726435,
           17726524-17726672,17727195-17727262,17727796-17727798
          Length = 165

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
 Frame = +3

Query: 105 LQKDGKNSVDNI--IKWMKDSKIID----EVKASEEKARKLFEGVPDIXNIDINKLKEVI 266
           L++ G N++  I  +   KD  +I     +V+AS      +  G P    +  + L  +I
Sbjct: 44  LKRVGVNTIPGIEEVNIFKDDVVIQFLNPKVQASIGANTWVVSGTPQTKKLQ-DLLPSII 102

Query: 267 NKMAAEQKKNVEELTTMLEKQPPKVLDALQAGASA 371
           N++  +   N+  L    +KQ P      +AGASA
Sbjct: 103 NQLGPDNLDNLRRLAEQFQKQAPGA-SGEEAGASA 136


>08_02_1531 + 27674064-27674771
          Length = 235

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
 Frame = +3

Query: 99  EKLQKDGKNSVDNIIKWMKDSKIIDEVKASEEKARKLFEGVPDIXNIDINKLK-EVINKM 275
           +K +K  K +V  +    +DSK++  +  + E    LFE   D+ +  I   K  +I+K 
Sbjct: 128 KKAKKHSKKTVKKVASDKEDSKMVKLLSNAREITTSLFESTLDLLSKQIAMPKFSLISK- 186

Query: 276 AAEQKKN 296
            A QKKN
Sbjct: 187 -AFQKKN 192


>07_03_1545 - 27599605-27599859,27600012-27600123,27600216-27600478
          Length = 209

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 14/51 (27%), Positives = 28/51 (54%)
 Frame = +3

Query: 183 ASEEKARKLFEGVPDIXNIDINKLKEVINKMAAEQKKNVEELTTMLEKQPP 335
           A+E  + KL+E VP++  + +N +  +   + A  +  V+ L  +L  +PP
Sbjct: 30  AAESSSAKLYEDVPEMPLMALNHISRLCKSIDASVRFYVKALGFVLIHRPP 80


>06_01_0975 -
           7566280-7566461,7567004-7567132,7567203-7567236,
           7567347-7567579,7568526-7568587,7568704-7568761,
           7568856-7568922,7569016-7569063
          Length = 270

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +3

Query: 195 KARKLF-EGVPDIXNIDINKLKEVINKMAAEQKKNVEELTTMLEKQPPKVLDA 350
           K RKL  EG+      DIN+L++ +    AE +   E L   L ++  ++++A
Sbjct: 16  KKRKLLDEGLDQKRAADINELRQAMKDWVAELQSENERLVAKLTQKEQQLVEA 68


>03_01_0067 -
           538929-539143,539306-539344,539579-539635,539727-539875,
           540298-540365,542009-542093,542185-542246,542612-542700,
           543034-543088,544127-544252,544477-544576,544697-545499
          Length = 615

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 6/98 (6%)
 Frame = +3

Query: 105 LQKDGKNSVDNI--IKWMKDSKIID----EVKASEEKARKLFEGVPDIXNIDINKLKEVI 266
           L++ G N++  I  +   KD  +I     +V+AS      +  G P    +  + L  +I
Sbjct: 483 LKRVGVNNIPGIEEVNIFKDDVVIQFQNPKVQASIGANTWVVSGTPQTKKLQ-DLLPTII 541

Query: 267 NKMAAEQKKNVEELTTMLEKQPPKVLDALQAGASAFKA 380
           N++  +   N+  L    +KQ P      +AGASA  A
Sbjct: 542 NQLGPDNLDNLRRLAEQFQKQVP----GAEAGASAGNA 575


>08_02_1532 + 27675824-27676531
          Length = 235

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
 Frame = +3

Query: 99  EKLQKDGKNSVDNIIKWMKDSKIIDEVKASEEKARKLFEGVPDIXNIDINKLK-EVINKM 275
           +K +K  K +V  +   M+DSK +  +  + +    LFE   D+ +  I   K  +I+K 
Sbjct: 128 KKAKKHSKKTVKKVASDMEDSKKVKLLSNARQITTSLFESTLDLLSKQIVLPKLSLISK- 186

Query: 276 AAEQKKN 296
            A QKKN
Sbjct: 187 -AFQKKN 192


>04_03_0318 + 14296001-14296630
          Length = 209

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = +3

Query: 159 SKIIDEVKASEEKAR-KLFEGVPDIXNIDINKLKEVINKMAAEQKKNVEEL 308
           +++++  KA     R K    + DI N  +NKLKE ++K+  +  ++  +L
Sbjct: 61  TRVLEHFKAMPHLVRYKKMTDLEDILNEQVNKLKEQLHKVGRDADESETKL 111


>10_04_0022 +
           7687383-7687670,7688479-7688556,7689456-7689535,
           7689876-7690095,7690444-7690677
          Length = 299

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
 Frame = +3

Query: 99  EKLQKDGKNSV-DNIIKWMKDSKIIDEVKAS-EEKARKLFEGVP-DIXNIDINKLKEVIN 269
           E+L +  + S+  N+   +    I +E+K   EE  ++LF+ V   +       L+E  +
Sbjct: 161 EELARRVEESIRKNVEDRLNSEDIKNEIKRRVEEGIKQLFDEVDAQLQKEKETALREARH 220

Query: 270 KMAAEQKKNVEELTTMLEKQPPKVLDA 350
           K A ++++  EEL  MLE+   KV +A
Sbjct: 221 K-AEQERREREELDRMLEENRRKVEEA 246


>08_02_0059 - 11778739-11780998,11781744-11781751
          Length = 755

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 10/91 (10%)
 Frame = +3

Query: 135 NIIKWMKDSKIID---EVKASEEKARKLFEGVPDIXNIDINKLK-------EVINKMAAE 284
           ++++ M + K++D   + K  EEKARKL + + ++ N+    LK        +    + +
Sbjct: 542 SMLRRMVNLKLLDVTIQEKLKEEKARKLSDNLNNLNNLTTLILKGVDLPISSIFTAPSLQ 601

Query: 285 QKKNVEELTTMLEKQPPKVLDALQAGASAFK 377
             K +E   T+L   P   +D +    S F+
Sbjct: 602 FLKTIELTGTILLTTPSPEIDKMTTSPSDFQ 632


>06_03_1085 +
           27491735-27492754,27492854-27492978,27493088-27493232,
           27493328-27493591
          Length = 517

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
 Frame = +3

Query: 153 KDSKIIDEVKASEEKA-----RKLFEGVPDIXNIDINKLKEVINKMAAEQKKNVEE 305
           ++S  +D++K  E KA      K+ E + D    D  K++      AAE++K VEE
Sbjct: 49  EESNFLDDLKDGERKALAELRAKVEEAIVDGKLFDDGKVEAKKKAAAAEEEKAVEE 104


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,318,837
Number of Sequences: 37544
Number of extensions: 168470
Number of successful extensions: 497
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 497
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1035514020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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