BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10p21
(496 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR769776-11|CAI95383.1| 823|Homo sapiens ankyrin repeat domain ... 32 1.3
BX664727-6|CAI39536.1| 823|Homo sapiens ankyrin repeat domain 2... 32 1.3
BX649567-2|CAH71137.1| 823|Homo sapiens ankyrin repeat domain 2... 32 1.3
AL773545-6|CAI12706.1| 823|Homo sapiens ankyrin repeat domain 2... 32 1.3
U97670-1|AAC78729.1| 258|Homo sapiens eukaryotic translation in... 31 1.7
BC002719-1|AAH02719.1| 258|Homo sapiens eukaryotic translation ... 31 1.7
AL513478-3|CAH72532.1| 823|Homo sapiens ankyrin repeat domain 2... 31 1.7
AK023388-1|BAB14555.1| 258|Homo sapiens protein ( Homo sapiens ... 31 1.7
AL832323-1|CAD38618.1| 899|Homo sapiens hypothetical protein pr... 31 2.9
AB051531-1|BAB21835.1| 855|Homo sapiens KIAA1744 protein protein. 31 2.9
EF119711-1|ABO69251.1| 3327|Homo sapiens beta-xin protein. 30 3.8
BC018673-1|AAH18673.1| 646|Homo sapiens Unknown (protein for IM... 30 3.8
AY820969-1|AAV87913.1| 3345|Homo sapiens CMYA3 protein. 30 3.8
D42085-1|BAA07680.2| 832|Homo sapiens KIAA0095 protein. 30 5.1
BC034346-1|AAH34346.1| 819|Homo sapiens nucleoporin 93kDa protein. 30 5.1
AY319414-1|AAP83847.1| 657|Homo sapiens outer dense fiber of sp... 30 5.1
AL445287-4|CAH71067.1| 638|Homo sapiens outer dense fiber of sp... 30 5.1
AL445287-3|CAH71066.1| 701|Homo sapiens outer dense fiber of sp... 30 5.1
AL359091-17|CAI13500.1| 638|Homo sapiens outer dense fiber of s... 30 5.1
AL359091-16|CAI13499.1| 701|Homo sapiens outer dense fiber of s... 30 5.1
AF053970-1|AAC08409.1| 610|Homo sapiens outer dense fiber prote... 30 5.1
AF012549-1|AAB66337.1| 638|Homo sapiens outer dense fiber prote... 30 5.1
>CR769776-11|CAI95383.1| 823|Homo sapiens ankyrin repeat domain 20
family, member A4 protein.
Length = 823
Score = 31.9 bits (69), Expect = 1.3
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +3
Query: 144 KWMKDSKIIDEVKASEEKARKLFEGVPDIXNIDINKLKEVINKMAAEQKKNVEELTTMLE 323
K++KD KI+ E A+ EK KL E ++ + ++ +N + AE + EL + E
Sbjct: 541 KYLKDIKIVKETNAALEKYIKLNE---EMITETAFRYQQELNDLKAENTRLNAEL--LKE 595
Query: 324 KQPPKVLDA-LQAGASAFKAALEK 392
K+ K L+A +++ S AA+ K
Sbjct: 596 KESKKRLEADIESYQSRLAAAISK 619
>BX664727-6|CAI39536.1| 823|Homo sapiens ankyrin repeat domain 20
family, member A2 protein.
Length = 823
Score = 31.9 bits (69), Expect = 1.3
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +3
Query: 144 KWMKDSKIIDEVKASEEKARKLFEGVPDIXNIDINKLKEVINKMAAEQKKNVEELTTMLE 323
K++KD KI+ E A+ EK KL E ++ + ++ +N + AE + EL + E
Sbjct: 541 KYLKDIKIVKETNAALEKYIKLNE---EMITETAFRYQQELNDLKAENTRLNAEL--LKE 595
Query: 324 KQPPKVLDA-LQAGASAFKAALEK 392
K+ K L+A +++ S AA+ K
Sbjct: 596 KESKKRLEADIESYQSRLAAAISK 619
>BX649567-2|CAH71137.1| 823|Homo sapiens ankyrin repeat domain 20
family, member A3 protein.
Length = 823
Score = 31.9 bits (69), Expect = 1.3
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +3
Query: 144 KWMKDSKIIDEVKASEEKARKLFEGVPDIXNIDINKLKEVINKMAAEQKKNVEELTTMLE 323
K++KD KI+ E A+ EK KL E ++ + ++ +N + AE + EL + E
Sbjct: 541 KYLKDIKIVKETNAALEKYIKLNE---EMITETAFRYQQELNDLKAENTRLNAEL--LKE 595
Query: 324 KQPPKVLDA-LQAGASAFKAALEK 392
K+ K L+A +++ S AA+ K
Sbjct: 596 KESKKRLEADIESYQSRLAAAISK 619
>AL773545-6|CAI12706.1| 823|Homo sapiens ankyrin repeat domain 20
family, member A2 protein.
Length = 823
Score = 31.9 bits (69), Expect = 1.3
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +3
Query: 144 KWMKDSKIIDEVKASEEKARKLFEGVPDIXNIDINKLKEVINKMAAEQKKNVEELTTMLE 323
K++KD KI+ E A+ EK KL E ++ + ++ +N + AE + EL + E
Sbjct: 541 KYLKDIKIVKETNAALEKYIKLNE---EMITETAFRYQQELNDLKAENTRLNAEL--LKE 595
Query: 324 KQPPKVLDA-LQAGASAFKAALEK 392
K+ K L+A +++ S AA+ K
Sbjct: 596 KESKKRLEADIESYQSRLAAAISK 619
>U97670-1|AAC78729.1| 258|Homo sapiens eukaryotic translation
initiation factor eIF3, p35 subunit protein.
Length = 258
Score = 31.5 bits (68), Expect = 1.7
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +3
Query: 153 KDSKIIDEVKASEEKARKLFEGVPDIXNIDINKLKEVINKMAAEQKKNVEELTTMLEK-Q 329
+D + D +++ ++ E P++ + K+ E I + +QKK EE+ LE+ +
Sbjct: 44 EDEDVKDNWDDDDDEKKEEAEVKPEVKISEKKKIAEKIKEKERQQKKRQEEIKKRLEEPE 103
Query: 330 PPKVL 344
PKVL
Sbjct: 104 EPKVL 108
>BC002719-1|AAH02719.1| 258|Homo sapiens eukaryotic translation
initiation factor 3, subunit 1 alpha, 35kDa protein.
Length = 258
Score = 31.5 bits (68), Expect = 1.7
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +3
Query: 153 KDSKIIDEVKASEEKARKLFEGVPDIXNIDINKLKEVINKMAAEQKKNVEELTTMLEK-Q 329
+D + D +++ ++ E P++ + K+ E I + +QKK EE+ LE+ +
Sbjct: 44 EDEDVKDNWDDDDDEKKEEAEVKPEVKISEKKKIAEKIKEKERQQKKRQEEIKKRLEEPE 103
Query: 330 PPKVL 344
PKVL
Sbjct: 104 EPKVL 108
>AL513478-3|CAH72532.1| 823|Homo sapiens ankyrin repeat domain 20
family, member A1 protein.
Length = 823
Score = 31.5 bits (68), Expect = 1.7
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +3
Query: 144 KWMKDSKIIDEVKASEEKARKLFEGVPDIXNIDINKLKEVINKMAAEQKKNVEELTTMLE 323
K++KD KI+ E A+ EK KL E ++ + ++ +N + AE + EL + E
Sbjct: 541 KYLKDIKIVKETNAALEKYIKLNE---EMITETAFRYQQELNYLKAENTRLNAEL--LKE 595
Query: 324 KQPPKVLDA-LQAGASAFKAALEK 392
K+ K L+A +++ S AA+ K
Sbjct: 596 KESKKRLEADIESYQSRLAAAISK 619
>AK023388-1|BAB14555.1| 258|Homo sapiens protein ( Homo sapiens
cDNA FLJ13326 fis, clone OVARC1001766, highly similar to
Homo sapiens eukaryotic translation initiation factor
eIF3, p35 ).
Length = 258
Score = 31.5 bits (68), Expect = 1.7
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +3
Query: 153 KDSKIIDEVKASEEKARKLFEGVPDIXNIDINKLKEVINKMAAEQKKNVEELTTMLEK-Q 329
+D + D +++ ++ E P++ + K+ E I + +QKK EE+ LE+ +
Sbjct: 44 EDEDVKDNWDDDDDEKKEEAEVKPEVKISEKKKIAEKIKEKERQQKKRQEEIKKRLEEPE 103
Query: 330 PPKVL 344
PKVL
Sbjct: 104 EPKVL 108
>AL832323-1|CAD38618.1| 899|Homo sapiens hypothetical protein
protein.
Length = 899
Score = 30.7 bits (66), Expect = 2.9
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +3
Query: 93 FFEKLQKDGKNSVDNIIKWMKDSKIIDEVKASEEKARKLFEGV 221
FF+ + D +S++N+ +K SKI++ +K +A E V
Sbjct: 178 FFQSISSDSLHSINNLQSSLKTSKILEHLKEDSSEASSQEEDV 220
>AB051531-1|BAB21835.1| 855|Homo sapiens KIAA1744 protein protein.
Length = 855
Score = 30.7 bits (66), Expect = 2.9
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +3
Query: 93 FFEKLQKDGKNSVDNIIKWMKDSKIIDEVKASEEKARKLFEGV 221
FF+ + D +S++N+ +K SKI++ +K +A E V
Sbjct: 134 FFQSISSDSLHSINNLQSSLKTSKILEHLKEDSSEASSQEEDV 176
>EF119711-1|ABO69251.1| 3327|Homo sapiens beta-xin protein.
Length = 3327
Score = 30.3 bits (65), Expect = 3.8
Identities = 24/89 (26%), Positives = 42/89 (47%)
Frame = +3
Query: 99 EKLQKDGKNSVDNIIKWMKDSKIIDEVKASEEKARKLFEGVPDIXNIDINKLKEVINKMA 278
+ L+KD + V I+ +S V A ++AR +FE D D+N +E + +
Sbjct: 289 KNLEKDYISEVSEIVSSQMNSG--SSVSADVQQARYVFENTNDSSQKDLNSEREYL-EWD 345
Query: 279 AEQKKNVEELTTMLEKQPPKVLDALQAGA 365
K V+ + + E QP LD++ G+
Sbjct: 346 EILKGEVQSIRWIFENQP---LDSINNGS 371
>BC018673-1|AAH18673.1| 646|Homo sapiens Unknown (protein for
IMAGE:4290750) protein.
Length = 646
Score = 30.3 bits (65), Expect = 3.8
Identities = 24/89 (26%), Positives = 42/89 (47%)
Frame = +3
Query: 99 EKLQKDGKNSVDNIIKWMKDSKIIDEVKASEEKARKLFEGVPDIXNIDINKLKEVINKMA 278
+ L+KD + V I+ +S V A ++AR +FE D D+N +E + +
Sbjct: 225 KNLEKDYISEVSEIVSSQMNSG--SSVSADVQQARYVFENTNDSSQKDLNSEREYL-EWD 281
Query: 279 AEQKKNVEELTTMLEKQPPKVLDALQAGA 365
K V+ + + E QP LD++ G+
Sbjct: 282 EILKGEVQSIRWIFENQP---LDSINNGS 307
>AY820969-1|AAV87913.1| 3345|Homo sapiens CMYA3 protein.
Length = 3345
Score = 30.3 bits (65), Expect = 3.8
Identities = 24/89 (26%), Positives = 42/89 (47%)
Frame = +3
Query: 99 EKLQKDGKNSVDNIIKWMKDSKIIDEVKASEEKARKLFEGVPDIXNIDINKLKEVINKMA 278
+ L+KD + V I+ +S V A ++AR +FE D D+N +E + +
Sbjct: 336 KNLEKDYISEVSEIVSSQMNSG--SSVSADVQQARYVFENTNDSSQKDLNSEREYL-EWD 392
Query: 279 AEQKKNVEELTTMLEKQPPKVLDALQAGA 365
K V+ + + E QP LD++ G+
Sbjct: 393 EILKGEVQSIRWIFENQP---LDSINNGS 418
>D42085-1|BAA07680.2| 832|Homo sapiens KIAA0095 protein.
Length = 832
Score = 29.9 bits (64), Expect = 5.1
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +3
Query: 87 DQFFEKLQKDGKNSVDNIIKWMKDSKIIDEVKASEEKARKLFEGVPDIXNI--DINKLKE 260
D KL+ DG I K+ D+K I AS + + LFE + ++ + +K+ E
Sbjct: 594 DMILGKLENDGSRKPGVIDKFTSDTKPIINKVASVAENKGLFEEAAKLYDLAKNADKVLE 653
Query: 261 VINKM 275
++NK+
Sbjct: 654 LMNKL 658
>BC034346-1|AAH34346.1| 819|Homo sapiens nucleoporin 93kDa protein.
Length = 819
Score = 29.9 bits (64), Expect = 5.1
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +3
Query: 87 DQFFEKLQKDGKNSVDNIIKWMKDSKIIDEVKASEEKARKLFEGVPDIXNI--DINKLKE 260
D KL+ DG I K+ D+K I AS + + LFE + ++ + +K+ E
Sbjct: 581 DMILGKLENDGSRKPGVIDKFTSDTKPIINKVASVAENKGLFEEAAKLYDLAKNADKVLE 640
Query: 261 VINKM 275
++NK+
Sbjct: 641 LMNKL 645
>AY319414-1|AAP83847.1| 657|Homo sapiens outer dense fiber of sperm
tails 2 isoform 3 protein.
Length = 657
Score = 29.9 bits (64), Expect = 5.1
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 8/73 (10%)
Frame = +3
Query: 153 KDSKII-DEVKASEEKARKLFEG-------VPDIXNIDINKLKEVINKMAAEQKKNVEEL 308
K++KI+ DE+ E AR+ F+ +PDI I KL E +++ ++KN+ +L
Sbjct: 569 KENKILKDEMNKEIEAARRQFQSQLADLQQLPDILKITEAKLAECQDQLQGYERKNI-DL 627
Query: 309 TTMLEKQPPKVLD 347
T ++ +V D
Sbjct: 628 TAIISDLRSRVRD 640
>AL445287-4|CAH71067.1| 638|Homo sapiens outer dense fiber of sperm
tails 2 protein.
Length = 638
Score = 29.9 bits (64), Expect = 5.1
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 8/73 (10%)
Frame = +3
Query: 153 KDSKII-DEVKASEEKARKLFEG-------VPDIXNIDINKLKEVINKMAAEQKKNVEEL 308
K++KI+ DE+ E AR+ F+ +PDI I KL E +++ ++KN+ +L
Sbjct: 550 KENKILKDEMNKEIEAARRQFQSQLADLQQLPDILKITEAKLAECQDQLQGYERKNI-DL 608
Query: 309 TTMLEKQPPKVLD 347
T ++ +V D
Sbjct: 609 TAIISDLRSRVRD 621
>AL445287-3|CAH71066.1| 701|Homo sapiens outer dense fiber of sperm
tails 2 protein.
Length = 701
Score = 29.9 bits (64), Expect = 5.1
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 8/73 (10%)
Frame = +3
Query: 153 KDSKII-DEVKASEEKARKLFEG-------VPDIXNIDINKLKEVINKMAAEQKKNVEEL 308
K++KI+ DE+ E AR+ F+ +PDI I KL E +++ ++KN+ +L
Sbjct: 613 KENKILKDEMNKEIEAARRQFQSQLADLQQLPDILKITEAKLAECQDQLQGYERKNI-DL 671
Query: 309 TTMLEKQPPKVLD 347
T ++ +V D
Sbjct: 672 TAIISDLRSRVRD 684
>AL359091-17|CAI13500.1| 638|Homo sapiens outer dense fiber of
sperm tails 2 protein.
Length = 638
Score = 29.9 bits (64), Expect = 5.1
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 8/73 (10%)
Frame = +3
Query: 153 KDSKII-DEVKASEEKARKLFEG-------VPDIXNIDINKLKEVINKMAAEQKKNVEEL 308
K++KI+ DE+ E AR+ F+ +PDI I KL E +++ ++KN+ +L
Sbjct: 550 KENKILKDEMNKEIEAARRQFQSQLADLQQLPDILKITEAKLAECQDQLQGYERKNI-DL 608
Query: 309 TTMLEKQPPKVLD 347
T ++ +V D
Sbjct: 609 TAIISDLRSRVRD 621
>AL359091-16|CAI13499.1| 701|Homo sapiens outer dense fiber of
sperm tails 2 protein.
Length = 701
Score = 29.9 bits (64), Expect = 5.1
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 8/73 (10%)
Frame = +3
Query: 153 KDSKII-DEVKASEEKARKLFEG-------VPDIXNIDINKLKEVINKMAAEQKKNVEEL 308
K++KI+ DE+ E AR+ F+ +PDI I KL E +++ ++KN+ +L
Sbjct: 613 KENKILKDEMNKEIEAARRQFQSQLADLQQLPDILKITEAKLAECQDQLQGYERKNI-DL 671
Query: 309 TTMLEKQPPKVLD 347
T ++ +V D
Sbjct: 672 TAIISDLRSRVRD 684
>AF053970-1|AAC08409.1| 610|Homo sapiens outer dense fiber protein
2/2 protein.
Length = 610
Score = 29.9 bits (64), Expect = 5.1
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 8/73 (10%)
Frame = +3
Query: 153 KDSKII-DEVKASEEKARKLFEG-------VPDIXNIDINKLKEVINKMAAEQKKNVEEL 308
K++KI+ DE+ E AR+ F+ +PDI I KL E +++ ++KN+ +L
Sbjct: 522 KENKILKDEMNKEIEAARRQFQSQLADLQQLPDILKITEAKLAECQDQLQGYERKNI-DL 580
Query: 309 TTMLEKQPPKVLD 347
T ++ +V D
Sbjct: 581 TAIISDLRSRVRD 593
>AF012549-1|AAB66337.1| 638|Homo sapiens outer dense fiber protein
2 protein.
Length = 638
Score = 29.9 bits (64), Expect = 5.1
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 8/73 (10%)
Frame = +3
Query: 153 KDSKII-DEVKASEEKARKLFEG-------VPDIXNIDINKLKEVINKMAAEQKKNVEEL 308
K++KI+ DE+ E AR+ F+ +PDI I KL E +++ ++KN+ +L
Sbjct: 550 KENKILKDEMNKEIEAARRQFQSQLADLQQLPDILKITEAKLAECQDQLQGYERKNI-DL 608
Query: 309 TTMLEKQPPKVLD 347
T ++ +V D
Sbjct: 609 TAIISDLRSRVRD 621
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,426,989
Number of Sequences: 237096
Number of extensions: 953284
Number of successful extensions: 6605
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 6534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6605
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4479766258
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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