BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmte10p20 (703 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 11_06_0258 + 21750922-21752272,21752971-21753377 31 1.2 04_04_0960 + 29704009-29705679 29 4.7 12_02_0546 - 20289272-20289470,20290054-20290223 28 6.2 11_01_0420 - 3230936-3231710,3232265-3233885,3234411-3234834 28 6.2 11_06_0184 - 21006659-21009823 28 8.3 09_02_0384 - 8294914-8297817 28 8.3 >11_06_0258 + 21750922-21752272,21752971-21753377 Length = 585 Score = 30.7 bits (66), Expect = 1.2 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%) Frame = -2 Query: 402 VARRPFQFHQDWSRSSGARFIANIHHQCQL-FDYYV 298 VAR+ F ++WS S +RF+ N+H C + F Y V Sbjct: 273 VARKVFH-EREWSESLASRFLENVHGLCGIPFRYLV 307 >04_04_0960 + 29704009-29705679 Length = 556 Score = 28.7 bits (61), Expect = 4.7 Identities = 16/59 (27%), Positives = 24/59 (40%) Frame = -3 Query: 569 YTFKPEETLNRQNKTNRTT*HLAFPPKSPYNNTHKLIDRYLALWSRFFFL*LKDYWWPG 393 Y +P R+ +T+ L+ PP P H+L D + + DYW PG Sbjct: 421 YAAEPHNEPRRRRRTSSFFVGLSKPPAQPQQQQHQLFDLRATTEGFKEEVYMYDYWRPG 479 >12_02_0546 - 20289272-20289470,20290054-20290223 Length = 122 Score = 28.3 bits (60), Expect = 6.2 Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%) Frame = -3 Query: 626 IFPHLCTFTNTKQLINHHYYTFKPEETLNRQN-KTNRTT*HLAFPPKSPYNNTHKLIDRY 450 I PH+ T+ +L+ H+ T++ + TN+ + H +FP K+P ++ K +RY Sbjct: 67 IHPHMHTYA---KLL--HWKIASMSSTISMSSLSTNKLSIHASFPKKNPLHSKRKRRERY 121 >11_01_0420 - 3230936-3231710,3232265-3233885,3234411-3234834 Length = 939 Score = 28.3 bits (60), Expect = 6.2 Identities = 16/38 (42%), Positives = 25/38 (65%) Frame = +3 Query: 204 TSKIAYNYFSDMVLRFFTSKLIMKESR*NTLIHNSRII 317 TS I+ + FS+M + KL +KE+ NT+IH+SR + Sbjct: 545 TSAISSS-FSNMTANDHSDKLNVKENVGNTIIHSSRSV 581 >11_06_0184 - 21006659-21009823 Length = 1054 Score = 27.9 bits (59), Expect = 8.3 Identities = 23/65 (35%), Positives = 36/65 (55%) Frame = +2 Query: 332 ILAINRAPLDLDQSW*NWKGLRATSNPSIIKKKILTIVPSTYLLTYVYYYMDFLAGKRGV 511 +L N+ PLDLD + G++ S IKK + ++ S+ LL V +D L G++G+ Sbjct: 664 LLLNNQLPLDLDLLYSIRHGMQLHPANSNIKKFLNSLSSSSRLLLTV---LD-LEGRKGL 719 Query: 512 KLCDL 526 K DL Sbjct: 720 KAGDL 724 >09_02_0384 - 8294914-8297817 Length = 967 Score = 27.9 bits (59), Expect = 8.3 Identities = 15/32 (46%), Positives = 19/32 (59%) Frame = -3 Query: 614 LCTFTNTKQLINHHYYTFKPEETLNRQNKTNR 519 LC+F N QL + Y FKPEE L + + NR Sbjct: 15 LCSFGNCLQL--NIAYAFKPEEVLVKLTEFNR 44 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,576,167 Number of Sequences: 37544 Number of extensions: 329240 Number of successful extensions: 546 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 538 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 546 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1803843684 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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