Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10p20
         (703 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF101305-1|AAF98592.2|  179|Caenorhabditis elegans Hypothetical ...    30   1.8  
AF016448-17|AAB65962.1|  656|Caenorhabditis elegans Hypothetical...    28   7.4  
Z48009-6|CAA88079.1|  329|Caenorhabditis elegans Hypothetical pr...    27   9.8  

>AF101305-1|AAF98592.2|  179|Caenorhabditis elegans Hypothetical
           protein C04F5.2 protein.
          Length = 179

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = -1

Query: 346 VYSQYPSS-MPIIRLLCISVFHRDSFIMSFEVKNLKTISLK*LYAIFDVYKNPLHFFL 176
           +YS + +S M    L C SV  R+ FI++  V  +  IS+   YA+  + ++ L F L
Sbjct: 1   MYSVHATSVMASSSLNCTSVMLRNHFIVAVNVDKIAQISIGLYYALLILVESSLFFLL 58


>AF016448-17|AAB65962.1|  656|Caenorhabditis elegans Hypothetical
           protein F41E6.14 protein.
          Length = 656

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 17/74 (22%), Positives = 30/74 (40%)
 Frame = -2

Query: 387 FQFHQDWSRSSGARFIANIHHQCQLFDYYVSVYFIVILS**VLK*KTLKPYR*NSYTLFL 208
           F+ H  W + S  R++ ++   C    YY+    I  ++  +     +  Y      LFL
Sbjct: 117 FEHHSYWDQVSTIRYLTHLWSLCTELQYYLMAPIIYFIASNLSNSNRIFGYSLAIIILFL 176

Query: 207 MCTKTRYIFSYNFI 166
               T +  SY F+
Sbjct: 177 FQLLTPFELSYCFL 190


>Z48009-6|CAA88079.1|  329|Caenorhabditis elegans Hypothetical
           protein AH6.8 protein.
          Length = 329

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 16/37 (43%), Positives = 18/37 (48%)
 Frame = -3

Query: 668 FWRIPRSYVQRLCFIFPHLCTFTNTKQLINHHYYTFK 558
           F+RI  SY  R+  I      FTNTKQ I  H    K
Sbjct: 293 FYRIRSSYANRVLIIKK----FTNTKQTIEEHIQQMK 325


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,447,461
Number of Sequences: 27780
Number of extensions: 333435
Number of successful extensions: 756
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 756
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)