Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10p20
(703 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g32840.1 68414.m04047 Ulp1 protease family protein similar to... 33 0.24
At5g34900.1 68418.m04114 Ulp1 protease family protein contains P... 31 0.74
At3g47260.1 68416.m05133 Ulp1 protease family protein contains P... 31 0.74
At3g32900.1 68416.m04166 Ulp1 protease family protein similar to... 31 0.74
At3g30440.1 68416.m03851 Ulp1 protease family protein contains P... 31 0.74
At2g14130.1 68415.m01574 Ulp1 protease family protein contains P... 31 0.74
At2g45610.1 68415.m05671 expressed protein low similarity to PrM... 29 2.3
At1g49360.1 68414.m05533 F-box family protein contains Pfam PF00... 29 3.0
At2g32090.2 68415.m03923 lactoylglutathione lyase family protein... 27 9.1
At2g32090.1 68415.m03922 lactoylglutathione lyase family protein... 27 9.1
>At1g32840.1 68414.m04047 Ulp1 protease family protein similar to
At4g04010, At2g06430, At2g15140, At2g04980, At2g14130,
At3g44500, At2g15190, At3g47260, At5g34900, At3g29210,
At2g02210, At3g32900
Length = 611
Score = 32.7 bits (71), Expect = 0.24
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 395 RATSNPSIIKKKILTIVPSTYLLTYVYYYMDFLAGKRG 508
R SNP + K K++ V S++L YM+FL K G
Sbjct: 425 RKESNPELFKNKLVVFVGSSFLNVIDESYMEFLDNKEG 462
>At5g34900.1 68418.m04114 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At1g32840, At4g04010,
At2g06430, At2g15140, At2g04980, At2g14130, At3g44500,
At2g15190, At3g47260, At3g29210, At2g02210, At3g32900
Length = 767
Score = 31.1 bits (67), Expect = 0.74
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 395 RATSNPSIIKKKILTIVPSTYLLTYVYYYMDFLAGKRG 508
R SNP + K K + V S++L YM+FL K G
Sbjct: 581 RKESNPELFKNKSVVFVGSSFLNVVDESYMEFLDNKEG 618
>At3g47260.1 68416.m05133 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At1g32840, At4g04010,
At2g06430, At2g15140, At2g04980, At2g14130, At3g44500,
At2g15190, At5g34900, At3g29210, At2g02210, At3g32900
Length = 820
Score = 31.1 bits (67), Expect = 0.74
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 395 RATSNPSIIKKKILTIVPSTYLLTYVYYYMDFLAGKRG 508
R SNP + K K + V S++L YM+FL K G
Sbjct: 680 RKESNPELFKNKSVVFVGSSFLNVIDESYMEFLDNKEG 717
>At3g32900.1 68416.m04166 Ulp1 protease family protein similar to
At1g32840, At4g04010, At2g06430, At2g15140, At2g04980,
At2g14130, At3g44500, At2g15190, At3g47260, At5g34900,
At3g29210, At2g02210
Length = 654
Score = 31.1 bits (67), Expect = 0.74
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 395 RATSNPSIIKKKILTIVPSTYLLTYVYYYMDFLAGKRG 508
R SNP + K K + V S++L YM+FL K G
Sbjct: 475 RKESNPELFKNKTVVFVGSSFLNAIDESYMEFLDDKEG 512
>At3g30440.1 68416.m03851 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 601
Score = 31.1 bits (67), Expect = 0.74
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 395 RATSNPSIIKKKILTIVPSTYLLTYVYYYMDFLAGKRG 508
R SNP + K K + V S++L YM+FL K G
Sbjct: 440 RKESNPELFKNKSVVFVGSSFLNVIDESYMEFLDNKEG 477
>At2g14130.1 68415.m01574 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At1g32840, At4g04010,
At2g06430, At2g15140, At2g04980, At3g44500, At2g15190,
At3g47260, At5g34900, At3g29210, At2g02210, At3g32900
Length = 808
Score = 31.1 bits (67), Expect = 0.74
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 395 RATSNPSIIKKKILTIVPSTYLLTYVYYYMDFLAGKRG 508
R SNP + K K + V S++L YM+FL K G
Sbjct: 668 RKESNPELFKNKSVVFVGSSFLNVIDESYMEFLDNKEG 705
>At2g45610.1 68415.m05671 expressed protein low similarity to PrMC3
[Pinus radiata] GI:5487873
Length = 324
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 409 SFNHKKKNLDHSAKYLSINLCVLLYGLFGGKAR 507
+F ++LDH L I+ CV LFGGK R
Sbjct: 177 AFQLALRSLDHDLTPLQIDGCVFYQPLFGGKTR 209
>At1g49360.1 68414.m05533 F-box family protein contains Pfam
PF00646: F-box domain
Length = 481
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +1
Query: 421 KKKNLDHSAKYLSINLCVLLYGLFG 495
KK+ LD S+ +LS CV+ YGL G
Sbjct: 368 KKETLDGSSIFLSDGSCVMTYGLTG 392
>At2g32090.2 68415.m03923 lactoylglutathione lyase family protein /
glyoxalase I family protein contains glyoxalase family
protein domain, Pfam:PF00903
Length = 113
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -1
Query: 331 PSSMPIIRLLCISVFHRDSFIMSFEVKNLKT 239
PS +P+ +C SV + DSF+ S + K ++T
Sbjct: 54 PSHLPMGHHICFSVPNFDSFLHSLKEKGIET 84
>At2g32090.1 68415.m03922 lactoylglutathione lyase family protein /
glyoxalase I family protein contains glyoxalase family
protein domain, Pfam:PF00903
Length = 135
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -1
Query: 331 PSSMPIIRLLCISVFHRDSFIMSFEVKNLKT 239
PS +P+ +C SV + DSF+ S + K ++T
Sbjct: 76 PSHLPMGHHICFSVPNFDSFLHSLKEKGIET 106
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,297,438
Number of Sequences: 28952
Number of extensions: 299603
Number of successful extensions: 613
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 613
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1506636208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -