Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10p16
         (702 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_32780| Best HMM Match : SAICAR_synt (HMM E-Value=0)                 65   5e-11
SB_29939| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.6  
SB_23845| Best HMM Match : IL6 (HMM E-Value=1.2)                       29   4.8  
SB_54236| Best HMM Match : bZIP_1 (HMM E-Value=1.1)                    28   8.4  

>SB_32780| Best HMM Match : SAICAR_synt (HMM E-Value=0)
          Length = 278

 Score = 65.3 bits (152), Expect = 5e-11
 Identities = 31/75 (41%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
 Frame = +3

Query: 102 KLGKLLIEGKTKQVFDVPDQP--GYCLLLNKDRITAGDGVKAHDLEGKAAISNQTNAKVF 275
           K+G+ +IEGKTK V+ +PD P   + LL +KD+ITA D  +  ++ GKAA S  T   +F
Sbjct: 2   KIGEKIIEGKTKIVYALPDSPDGNHVLLKSKDKITAFDATRKDEMSGKAAQSTATTCAIF 61

Query: 276 EILKSAGEQNFLIEK 320
           E+LK+ G +   +++
Sbjct: 62  EMLKACGLKTHFVKR 76


>SB_29939| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1122

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = +3

Query: 6    SSRDPHRIGSSLHSYL-RSKIAKMSHPKQVGQYKLGKLLI 122
            +S  P  +GSS  S L R+ +A  +HP+  G Y L +L+I
Sbjct: 964  TSDHPRYLGSSSSSSLPRNILATSAHPRYHGSYLLSQLII 1003


>SB_23845| Best HMM Match : IL6 (HMM E-Value=1.2)
          Length = 1388

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = +3

Query: 63   IAKMSHPKQVGQYKLGKLLIEGKTKQVFDVPDQPGYCLLLNK 188
            I K + P++  Q K  KLL+   T +  ++PD+    L+LNK
Sbjct: 1240 IKKRTEPQESDQKKQCKLLLAASTLKHRNLPDENAVGLVLNK 1281


>SB_54236| Best HMM Match : bZIP_1 (HMM E-Value=1.1)
          Length = 1188

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +3

Query: 15   DPHRIGSSLHSYLRSKIAKMSHPKQVGQYKLGKLLIEGKTKQ-VFDVPDQP 164
            DP+ +G + H +  S +A ++HPK    +K  +   +  TK+    +PD P
Sbjct: 1107 DPNHVGGNHHEHCSSILALLTHPK--NSFKHIEKKTKAPTKEGGVRIPDSP 1155


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,438,857
Number of Sequences: 59808
Number of extensions: 368420
Number of successful extensions: 829
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1841633001
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)