Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10p15
         (709 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70309-13|CAL36512.2|  383|Caenorhabditis elegans Hypothetical p...   174   6e-44
Z70309-12|CAB54293.3|  413|Caenorhabditis elegans Hypothetical p...   174   6e-44
Z70309-11|CAB54291.3|  408|Caenorhabditis elegans Hypothetical p...   174   6e-44
AF003136-10|AAK21378.2| 1281|Caenorhabditis elegans High inciden...    28   5.7  

>Z70309-13|CAL36512.2|  383|Caenorhabditis elegans Hypothetical
           protein R102.4c protein.
          Length = 383

 Score =  174 bits (423), Expect = 6e-44
 Identities = 78/152 (51%), Positives = 106/152 (69%)
 Frame = +2

Query: 251 VDLRSDTVTKPTKAMKHAMVNSALGDDVYGEDPTVNALENKIAALLGKQAALFVPSGTMS 430
           +DLRSDTVT P+  M+ AM  + +GDDVYGED T N LE + A L GK+A LFV SGTM 
Sbjct: 37  IDLRSDTVTVPSVEMRRAMAEAIVGDDVYGEDTTTNRLEQRCAELFGKEAGLFVTSGTMG 96

Query: 431 NLIAIMVHCNKRGSEAFVGDLSHIYKYEVGGASHLAGVMLSTVANKPDGTFDLQELEDRI 610
           NL+AIM HC +RG E  VG  +HI+++E G  +  AG+  +T+  KPDGT DL ++E  I
Sbjct: 97  NLLAIMAHC-QRGEEIIVGRYNHIHRWEQGNYAQFAGISATTLEVKPDGTMDLNDIEQAI 155

Query: 611 RGSNIHEPVTAMVAVENTHNYCGGKVLPLKFL 706
           R  + H P + ++ +ENTHNY GGK LP++++
Sbjct: 156 RVKDCHMPASKLICIENTHNYTGGKALPIEWM 187


>Z70309-12|CAB54293.3|  413|Caenorhabditis elegans Hypothetical
           protein R102.4b protein.
          Length = 413

 Score =  174 bits (423), Expect = 6e-44
 Identities = 78/152 (51%), Positives = 106/152 (69%)
 Frame = +2

Query: 251 VDLRSDTVTKPTKAMKHAMVNSALGDDVYGEDPTVNALENKIAALLGKQAALFVPSGTMS 430
           +DLRSDTVT P+  M+ AM  + +GDDVYGED T N LE + A L GK+A LFV SGTM 
Sbjct: 67  IDLRSDTVTVPSVEMRRAMAEAIVGDDVYGEDTTTNRLEQRCAELFGKEAGLFVTSGTMG 126

Query: 431 NLIAIMVHCNKRGSEAFVGDLSHIYKYEVGGASHLAGVMLSTVANKPDGTFDLQELEDRI 610
           NL+AIM HC +RG E  VG  +HI+++E G  +  AG+  +T+  KPDGT DL ++E  I
Sbjct: 127 NLLAIMAHC-QRGEEIIVGRYNHIHRWEQGNYAQFAGISATTLEVKPDGTMDLNDIEQAI 185

Query: 611 RGSNIHEPVTAMVAVENTHNYCGGKVLPLKFL 706
           R  + H P + ++ +ENTHNY GGK LP++++
Sbjct: 186 RVKDCHMPASKLICIENTHNYTGGKALPIEWM 217


>Z70309-11|CAB54291.3|  408|Caenorhabditis elegans Hypothetical
           protein R102.4a protein.
          Length = 408

 Score =  174 bits (423), Expect = 6e-44
 Identities = 78/152 (51%), Positives = 106/152 (69%)
 Frame = +2

Query: 251 VDLRSDTVTKPTKAMKHAMVNSALGDDVYGEDPTVNALENKIAALLGKQAALFVPSGTMS 430
           +DLRSDTVT P+  M+ AM  + +GDDVYGED T N LE + A L GK+A LFV SGTM 
Sbjct: 62  IDLRSDTVTVPSVEMRRAMAEAIVGDDVYGEDTTTNRLEQRCAELFGKEAGLFVTSGTMG 121

Query: 431 NLIAIMVHCNKRGSEAFVGDLSHIYKYEVGGASHLAGVMLSTVANKPDGTFDLQELEDRI 610
           NL+AIM HC +RG E  VG  +HI+++E G  +  AG+  +T+  KPDGT DL ++E  I
Sbjct: 122 NLLAIMAHC-QRGEEIIVGRYNHIHRWEQGNYAQFAGISATTLEVKPDGTMDLNDIEQAI 180

Query: 611 RGSNIHEPVTAMVAVENTHNYCGGKVLPLKFL 706
           R  + H P + ++ +ENTHNY GGK LP++++
Sbjct: 181 RVKDCHMPASKLICIENTHNYTGGKALPIEWM 212


>AF003136-10|AAK21378.2| 1281|Caenorhabditis elegans High incidence
           of males (increasedx chromosome loss) protein 1, isoform
           a protein.
          Length = 1281

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 16/56 (28%), Positives = 27/56 (48%)
 Frame = +2

Query: 521 GASHLAGVMLSTVANKPDGTFDLQELEDRIRGSNIHEPVTAMVAVENTHNYCGGKV 688
           G S+L   +   +  KP  +  +++  D I G+ I++PV     V   + Y  GKV
Sbjct: 49  GKSNLMDAISFVLGEKPS-SLRVRKYADLIHGAPINKPVAKKCRVTMNYKYSDGKV 103


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,114,866
Number of Sequences: 27780
Number of extensions: 277618
Number of successful extensions: 509
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 506
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)