BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmte10p14 (370 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 09_04_0156 - 15190502-15190903,15191149-15191154,15191512-15192351 27 6.1 12_02_0590 - 20853040-20853081,20853694-20853918,20854995-208558... 26 8.1 11_03_0017 + 8990852-8990938,8991056-8991243,8991687-8991795,899... 26 8.1 06_01_0951 - 7329416-7329778,7329862-7330131,7330285-7330695,733... 26 8.1 >09_04_0156 - 15190502-15190903,15191149-15191154,15191512-15192351 Length = 415 Score = 26.6 bits (56), Expect = 6.1 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = +1 Query: 187 SEDNTERLETSEVLPDFEHHCKQLYYHDI 273 +E TE+ E SE HH ++YY DI Sbjct: 358 AEKKTEKPEASEWNSSAHHHQNRMYYCDI 386 >12_02_0590 - 20853040-20853081,20853694-20853918,20854995-20855886, 20856120-20856122,20856284-20856513 Length = 463 Score = 26.2 bits (55), Expect = 8.1 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 3/37 (8%) Frame = +1 Query: 166 EVLENNCSEDNTERLETSEVL---PDFEHHCKQLYYH 267 + +N SED T+ +E SEV PD E + L H Sbjct: 333 DTFNSNTSEDTTKSIEVSEVQRLHPDEEEKAENLVSH 369 >11_03_0017 + 8990852-8990938,8991056-8991243,8991687-8991795, 8992448-8992832,8993240-8993309,8993410-8993477, 8995009-8995124,8995211-8995317,8995488-8995627, 8995794-8996044 Length = 506 Score = 26.2 bits (55), Expect = 8.1 Identities = 11/21 (52%), Positives = 15/21 (71%) Frame = +1 Query: 172 LENNCSEDNTERLETSEVLPD 234 +E+NC EDN E+ ETS L + Sbjct: 417 VEDNCLEDNEEQPETSLALAE 437 >06_01_0951 - 7329416-7329778,7329862-7330131,7330285-7330695, 7331149-7331300,7332400-7332469,7333941-7334018 Length = 447 Score = 26.2 bits (55), Expect = 8.1 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = +1 Query: 136 YRVILTRDVFEVLENNCSEDNTERLETSEVLPDFEHHCKQLYYHD 270 Y+ +L + + + + CS L S V+ HHC +L HD Sbjct: 119 YKALLPKTMV-IADLGCSTGPNTMLFMSNVINMIAHHCSKLDEHD 162 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 7,618,659 Number of Sequences: 37544 Number of extensions: 120623 Number of successful extensions: 251 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 245 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 251 length of database: 14,793,348 effective HSP length: 74 effective length of database: 12,015,092 effective search space used: 576724416 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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