Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10p14
         (370 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0156 - 15190502-15190903,15191149-15191154,15191512-15192351     27   6.1  
12_02_0590 - 20853040-20853081,20853694-20853918,20854995-208558...    26   8.1  
11_03_0017 + 8990852-8990938,8991056-8991243,8991687-8991795,899...    26   8.1  
06_01_0951 - 7329416-7329778,7329862-7330131,7330285-7330695,733...    26   8.1  

>09_04_0156 - 15190502-15190903,15191149-15191154,15191512-15192351
          Length = 415

 Score = 26.6 bits (56), Expect = 6.1
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +1

Query: 187 SEDNTERLETSEVLPDFEHHCKQLYYHDI 273
           +E  TE+ E SE      HH  ++YY DI
Sbjct: 358 AEKKTEKPEASEWNSSAHHHQNRMYYCDI 386


>12_02_0590 -
           20853040-20853081,20853694-20853918,20854995-20855886,
           20856120-20856122,20856284-20856513
          Length = 463

 Score = 26.2 bits (55), Expect = 8.1
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
 Frame = +1

Query: 166 EVLENNCSEDNTERLETSEVL---PDFEHHCKQLYYH 267
           +   +N SED T+ +E SEV    PD E   + L  H
Sbjct: 333 DTFNSNTSEDTTKSIEVSEVQRLHPDEEEKAENLVSH 369


>11_03_0017 +
           8990852-8990938,8991056-8991243,8991687-8991795,
           8992448-8992832,8993240-8993309,8993410-8993477,
           8995009-8995124,8995211-8995317,8995488-8995627,
           8995794-8996044
          Length = 506

 Score = 26.2 bits (55), Expect = 8.1
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +1

Query: 172 LENNCSEDNTERLETSEVLPD 234
           +E+NC EDN E+ ETS  L +
Sbjct: 417 VEDNCLEDNEEQPETSLALAE 437


>06_01_0951 -
           7329416-7329778,7329862-7330131,7330285-7330695,
           7331149-7331300,7332400-7332469,7333941-7334018
          Length = 447

 Score = 26.2 bits (55), Expect = 8.1
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = +1

Query: 136 YRVILTRDVFEVLENNCSEDNTERLETSEVLPDFEHHCKQLYYHD 270
           Y+ +L + +  + +  CS      L  S V+    HHC +L  HD
Sbjct: 119 YKALLPKTMV-IADLGCSTGPNTMLFMSNVINMIAHHCSKLDEHD 162


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,618,659
Number of Sequences: 37544
Number of extensions: 120623
Number of successful extensions: 251
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 251
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 576724416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)