Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10p14
         (370 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z35719-2|CAA84799.2|  715|Caenorhabditis elegans Hypothetical pr...    28   2.4  
U00067-10|ABD94100.1|  247|Caenorhabditis elegans Hypothetical p...    27   4.2  
U00067-9|AAK20073.1|  364|Caenorhabditis elegans Hypothetical pr...    27   4.2  
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr...    27   5.5  
Z81051-8|CAB02869.1|  425|Caenorhabditis elegans Hypothetical pr...    26   7.3  
U12964-3|AAA91222.2| 1032|Caenorhabditis elegans Nhl (ring finge...    26   9.7  

>Z35719-2|CAA84799.2|  715|Caenorhabditis elegans Hypothetical
           protein F17C8.3 protein.
          Length = 715

 Score = 27.9 bits (59), Expect = 2.4
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +1

Query: 166 EVLENNCSEDNTERLETSEVLPDFEHHCKQLYYH 267
           E++E+  SED  E  E S  LP  E   +Q  YH
Sbjct: 317 EMIEDEISEDVGENEEISITLPSREEKIQQYAYH 350


>U00067-10|ABD94100.1|  247|Caenorhabditis elegans Hypothetical
           protein F54E7.1b protein.
          Length = 247

 Score = 27.1 bits (57), Expect = 4.2
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = -3

Query: 182 LFSKTSNTSRVKITLYLLSMLFQKPF-YRYMWSPWQLILFI*LN 54
           L + T  T R  +T+ L  MLF KPF   Y+++   ++L I LN
Sbjct: 168 LVAVTVTTLRKALTIILSFMLFSKPFTIEYVYAGSVVMLAIYLN 211


>U00067-9|AAK20073.1|  364|Caenorhabditis elegans Hypothetical
           protein F54E7.1a protein.
          Length = 364

 Score = 27.1 bits (57), Expect = 4.2
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = -3

Query: 182 LFSKTSNTSRVKITLYLLSMLFQKPF-YRYMWSPWQLILFI*LN 54
           L + T  T R  +T+ L  MLF KPF   Y+++   ++L I LN
Sbjct: 285 LVAVTVTTLRKALTIILSFMLFSKPFTIEYVYAGSVVMLAIYLN 328


>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical protein
            C16A3.7 protein.
          Length = 1119

 Score = 26.6 bits (56), Expect = 5.5
 Identities = 11/50 (22%), Positives = 24/50 (48%)
 Frame = +1

Query: 106  KGFWKSMERRYRVILTRDVFEVLENNCSEDNTERLETSEVLPDFEHHCKQ 255
            K +WK  E  ++ +  ++    +E + +ED  E  +  +  P +E  C +
Sbjct: 1045 KDWWKDEEEGWQKVQQKEYVVEVERDMTEDEIEAAKKLDEGPTWEDQCDE 1094


>Z81051-8|CAB02869.1|  425|Caenorhabditis elegans Hypothetical
           protein C55A6.9 protein.
          Length = 425

 Score = 26.2 bits (55), Expect = 7.3
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +1

Query: 157 DVFEVLENNCSEDNTERLETSEVLPDFEHHCKQLYYH 267
           DV + ++ + S+   + +E S V PDF+ H K L+ H
Sbjct: 177 DVRKPVKEHYSKKGVKAVEESFVFPDFD-HWKHLFAH 212


>U12964-3|AAA91222.2| 1032|Caenorhabditis elegans Nhl (ring finger
           b-box coiled coil)domain containing protein 2 protein.
          Length = 1032

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 226 LPDFEHHCKQLYYHDIAFI 282
           + DF+HHC Q+Y  +  FI
Sbjct: 906 ITDFKHHCVQVYTSEGKFI 924


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,348,438
Number of Sequences: 27780
Number of extensions: 128431
Number of successful extensions: 371
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 371
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 524900642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)