Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10p12
         (714 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.81 
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   3.3  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    23   3.3  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   3.3  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   3.3  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   5.7  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   5.7  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    22   5.7  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   7.5  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   7.5  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    21   7.5  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   7.5  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   9.9  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   9.9  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   9.9  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 24.6 bits (51), Expect = 0.81
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = -2

Query: 272  LFIILQKCSRFW*MLGYITFLS**NLLTIICLYSIWF 162
            L ++LQ     W  LGY+ F+S      ++C+  + +
Sbjct: 894  LCVVLQLQENDWLQLGYLIFVSTLYTANVVCICHVCY 930


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 164 FCCDNAFNI 138
           +CCDN FN+
Sbjct: 161 YCCDNNFNV 169


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = -2

Query: 185 ICLYSIWFCCDNAFNILK*QLSSYYT-YWAF 96
           IC+   ++C D+ FN        Y+T  WAF
Sbjct: 246 ICITQFYYCYDSGFNSDN-LTDVYFTLQWAF 275


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 310 LLKCTVPKRTTVACLSF 260
           LL C+ PK+  V C+ F
Sbjct: 27  LLSCSFPKKKLVYCIIF 43


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 310 LLKCTVPKRTTVACLSF 260
           LL C+ PK+  V C+ F
Sbjct: 23  LLSCSFPKKKLVYCIIF 39


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 12/52 (23%), Positives = 23/52 (44%)
 Frame = +2

Query: 554 QKIPGCKLYLGDRPIQITIARAFQSLSVYELGQVLYHISTSNPKPLDGKSXR 709
           + +PGC+ Y GD  ++ +I ++     +   G    H   +  KP    + R
Sbjct: 215 EDVPGCEDYYGDLDLK-SIRKSELLAGLQSSGSSRSHQPATKSKPRPAPASR 265


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 646 GSSPVSHFNIEPEALRWKIXAY 711
           G  P++H N EPE L +   ++
Sbjct: 39  GVFPLNHLNEEPEKLHFTFKSW 60


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +3

Query: 105 ICVIARQLLFKNIESIVTAKPNTVQTYYSQKVLLRK 212
           IC  A QLLF N++ + +    T      Q +LL +
Sbjct: 199 ICESAAQLLFMNVQWVRSIPAFTCLPLSDQLLLLEE 234


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 232 IYQNLLHFCKMINK 273
           IY  L+  CK INK
Sbjct: 217 IYSQLVFMCKKINK 230


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +2

Query: 596 IQITIARAFQSLSVYELGQVLYHISTSNPKPLD 694
           IQ  +AR   + S YE  +   + S  NP+P D
Sbjct: 110 IQTQVARPPPARSPYEWIKKTSYQSQPNPEPAD 142


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +2

Query: 596 IQITIARAFQSLSVYELGQVLYHISTSNPKPLD 694
           IQ  +AR   + S YE  +   + S  NP+P D
Sbjct: 110 IQTQVARPPPARSPYEWIKKTSYQSQPNPEPAD 142


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -1

Query: 543 YALRNSPPGATPSSLAISAYVLSSMAWSIP 454
           Y LRN  P   PS+       L SM  S+P
Sbjct: 198 YGLRNYGPEPVPSTPYPPPGSLGSMGVSVP 227


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/35 (22%), Positives = 15/35 (42%)
 Frame = -2

Query: 107 YWAFHILFHYL*KLEFRHISVK*TKIYFRWYRKLI 3
           +W+   ++    K  F H++    +    W  KLI
Sbjct: 572 FWSLLRIYELARKAAFAHLNSNEARATLNWVSKLI 606


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 205 NRTF*L*YVCTVFGFAVTMLSIFL 134
           N T+ L  +  VF FAVT  S ++
Sbjct: 27  NPTYRLYKIFVVFSFAVTFFSAWI 50


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +3

Query: 105 ICVIARQLLFKNIESIVTAKPNTVQTYYSQKVLLRK 212
           IC  A QL+F N++ + +    T      Q +LL +
Sbjct: 199 ICESAAQLIFMNVQWVRSIPAFTCLPLSDQLLLLEE 234


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,727
Number of Sequences: 336
Number of extensions: 3917
Number of successful extensions: 21
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)