Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10p12
         (714 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    22   5.0  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   6.6  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   6.6  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        21   8.8  

>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 626 SLSVYELGQVLYHISTSNPKPL 691
           SL++   GQVL   S+  PKPL
Sbjct: 15  SLTLGPAGQVLAGSSSPRPKPL 36


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 487 IRFEQHGMEHTSYEILAF 434
           ++F++HG     YEIL F
Sbjct: 388 VKFDEHGDGLARYEILNF 405


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 487 IRFEQHGMEHTSYEILAF 434
           ++F++HG     YEIL F
Sbjct: 478 VKFDEHGDGLARYEILNF 495


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -1

Query: 519 GATPSSLAISAYVLSSMA 466
           GATPSSL  SA   S+++
Sbjct: 178 GATPSSLVSSASASSAVS 195


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,512
Number of Sequences: 438
Number of extensions: 4127
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22048515
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)