Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10p07
         (504 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    24   0.89 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   6.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   6.3  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 23.8 bits (49), Expect = 0.89
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = -1

Query: 291 FV*FYNRRPVYVIIFIYCFINQT*FIVTLFLNFGH 187
           +V F    P+  +IF YC I  T  I   F    H
Sbjct: 145 YVFFVENEPILYLIFSYCPIVTTGIIKIQFATCAH 179


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 17/89 (19%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
 Frame = -1

Query: 504 FFXYXEVLFFDYDFLLGII*SYNLLVVALTMLIFMFYIFRLRFL*VFCNFVTCL-RFFSS 328
           ++ Y   + F    L  +   Y ++ +   + I+ FY   + F  V   F+ C+  FF +
Sbjct: 114 YYFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCIYYFYCAFIIFT-VHLLFLLCIYHFFCA 172

Query: 327 VS*KGLYSVVLCFV*FYNRRPVYVIIFIY 241
                ++ +  C   F+N   ++++   Y
Sbjct: 173 FIIFTMHLLFCCAFIFFNMHLLFLLCLDY 201


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = -2

Query: 488 KFFSLITIFFLVLYSLII 435
           K  ++IT+FF+VL + ++
Sbjct: 61  KVVTIITVFFVVLGAAVV 78


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = -2

Query: 488 KFFSLITIFFLVLYSLII 435
           K  ++IT+FF+VL + ++
Sbjct: 61  KVVTIITVFFVVLGAAVV 78


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,231
Number of Sequences: 336
Number of extensions: 1784
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11944578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)