Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10p07
(504 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 35 0.006
SPCC1682.10 |rpn8||19S proteasome regulatory subunit Rpn8|Schizo... 27 1.6
SPCC553.12c ||SPCC794.13|conserved fungal protein|Schizosaccharo... 26 2.8
SPBC1685.11 |rlp1||RecA family ATPase Rlp1|Schizosaccharomyces p... 25 4.9
SPAC186.09 |||pyruvate decarboxylase |Schizosaccharomyces pombe|... 25 6.5
SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces pombe... 25 6.5
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 25 6.5
SPAC17G6.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 8.5
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 25 8.5
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 35.1 bits (77), Expect = 0.006
Identities = 25/109 (22%), Positives = 50/109 (45%)
Frame = +1
Query: 76 NIRLHSDIIDFHEYYTNAKLHELYDLMRNYDLIDITLMTEVEEKRDNESCLIDETIYEDD 255
N L ++ D E +N+ +L+D DL++ + + +NES L+ + EDD
Sbjct: 3981 NQDLDEEVNDIPEDLSNSLNEKLWDEPNEEDLLETEQKSNEQSAANNESDLVSK---EDD 4037
Query: 256 NVHWPSIIELNKTEYNRIQAFLRDTAKKPEAGNKVTKDSEEPQPENVEH 402
N ++ + ++ E + D E + +++ +P PEN +H
Sbjct: 4038 N---KALEDKDRQEKEDEEEMSDDVGIDDEIQPDIQENNSQPPPENEDH 4083
Score = 24.6 bits (51), Expect = 8.5
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 40 RVVIAFCFK*NVNIRLHSDIIDFHEYYTNAKLHELYDL 153
+V+I F NVN + S I+D + Y + K DL
Sbjct: 4639 KVMIVFVILDNVNTQKKSSILDIKKVYYDTKEDGTMDL 4676
>SPCC1682.10 |rpn8||19S proteasome regulatory subunit
Rpn8|Schizosaccharomyces pombe|chr 3|||Manual
Length = 324
Score = 27.1 bits (57), Expect = 1.6
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 15/105 (14%)
Frame = +1
Query: 115 YYTNAKLH----ELYDLMRNYDLIDITLMTEVEEKR----DNESCLIDETIYEDDN---- 258
Y+T +L E+ +L++ Y + ++ +V+ K N IDE EDD
Sbjct: 102 YHTGPQLRPSDLEINNLLKKYIPNPVLVIIDVKPKSVGLPTNAYFAIDEI--EDDGSKSS 159
Query: 259 ---VHWPSIIELNKTEYNRIQAFLRDTAKKPEAGNKVTKDSEEPQ 384
VH PS IE + E ++ LRDT + G T+ +++ Q
Sbjct: 160 RTFVHLPSSIEAEEAEEIGVEHLLRDT-RDASVGTLATRVTQQAQ 203
>SPCC553.12c ||SPCC794.13|conserved fungal
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 521
Score = 26.2 bits (55), Expect = 2.8
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -2
Query: 116 YSWKSIISLCSLILTFYLKQK 54
YSW +SLC+L+ ++ L K
Sbjct: 303 YSWTGTVSLCNLVSSWILNTK 323
>SPBC1685.11 |rlp1||RecA family ATPase Rlp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 363
Score = 25.4 bits (53), Expect = 4.9
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 77 LTFYLKQKAITTRGT*RQCHRNC 9
LTF L ++ I++RG + C NC
Sbjct: 89 LTFILHERLISSRGVSQTCKCNC 111
>SPAC186.09 |||pyruvate decarboxylase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 572
Score = 25.0 bits (52), Expect = 6.5
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +1
Query: 307 IQAFLRDTAKKPEAGNKVTKDSEEPQPENVE--HKNQHCECNN*KIIR 444
++ FL + AKK +A N + + +PE++E +N N +IIR
Sbjct: 335 LRDFLHELAKKVKANNASVVEYKRIRPESLEIPMENPKAALNRKEIIR 382
>SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 25.0 bits (52), Expect = 6.5
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +1
Query: 244 YEDDNVHWPSIIELNKTEYNRIQAFLRDTAKKPEAGNKVTKDSEEPQP 387
++D+ V P + NKT+YNRI+ ++ K+ G K+ +EP P
Sbjct: 331 FDDNTVVGPVV---NKTQYNRIKNYIEQGKKE---GAKLVL-GDEPLP 371
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 25.0 bits (52), Expect = 6.5
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 325 DTAKKPEAGNKVTKDSEEPQPENVE 399
+ +KKP+ N+V+ EE +P+N E
Sbjct: 1250 EESKKPDVLNQVSLSIEEEKPKNKE 1274
>SPAC17G6.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 433
Score = 24.6 bits (51), Expect = 8.5
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 343 EAGNKVTKDSEEPQPENVEH 402
+AG K+T S++P P EH
Sbjct: 346 KAGEKLTDSSKQPSPPVAEH 365
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 24.6 bits (51), Expect = 8.5
Identities = 19/53 (35%), Positives = 23/53 (43%)
Frame = -2
Query: 350 PASGFLAVSLRKACILLYSVLFSSIIEGQCTLSSSYIVSSIKHDSLSRFSSTS 192
P S L S + L S SS + SSS SSI SL+ S+TS
Sbjct: 104 PTSSSLTSSSATSSSLASSSTTSSSLASSSITSSSLASSSITSSSLASSSTTS 156
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,661,704
Number of Sequences: 5004
Number of extensions: 30667
Number of successful extensions: 101
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 100
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 200198394
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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