Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10p07
         (504 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50300-5|AAC48103.2|  337|Caenorhabditis elegans Serpentine rece...    34   0.067
AC084158-29|AAL27264.2|  666|Caenorhabditis elegans Yeast smf (d...    29   1.4  
Z54282-1|CAA91056.2| 1201|Caenorhabditis elegans Hypothetical pr...    29   1.9  
X58520-1|CAA41410.1| 1203|Caenorhabditis elegans zinc-finger pro...    29   1.9  
U43375-5|AAA83622.1| 1035|Caenorhabditis elegans Hypothetical pr...    29   2.5  
U00036-14|ABC71802.1|  672|Caenorhabditis elegans Hypothetical p...    29   2.5  
U00036-13|ABC71803.1|  479|Caenorhabditis elegans Hypothetical p...    29   2.5  
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ...    28   3.3  
Z30317-5|CAA82971.4| 1890|Caenorhabditis elegans Hypothetical pr...    28   4.4  
AC024843-12|AAF60833.3|  986|Caenorhabditis elegans Hypothetical...    28   4.4  
Z83221-6|CAB05703.3|  210|Caenorhabditis elegans Hypothetical pr...    27   5.8  
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in...    27   5.8  
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in...    27   5.8  
AC006604-1|AAF39751.1|  484|Caenorhabditis elegans Hypothetical ...    27   5.8  
Z95559-13|CAB09003.2|  682|Caenorhabditis elegans Hypothetical p...    27   7.7  
Z48009-2|CAA88077.1|  230|Caenorhabditis elegans Hypothetical pr...    27   7.7  
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr...    27   7.7  
AC006661-10|AAF39887.1|  843|Caenorhabditis elegans Hypothetical...    27   7.7  

>U50300-5|AAC48103.2|  337|Caenorhabditis elegans Serpentine
           receptor, class t protein18 protein.
          Length = 337

 Score = 33.9 bits (74), Expect = 0.067
 Identities = 16/47 (34%), Positives = 29/47 (61%)
 Frame = -1

Query: 249 FIYCFINQT*FIVTLFLNFGH*CDID*IVISHQIVQLMKFSICIIFM 109
           F++CF + T  +V +++NF    ++  IVI H   QL   ++CII++
Sbjct: 263 FLFCFFHATSSVVYVYMNFFEISEL-LIVIGHFFWQLSSGTVCIIYL 308


>AC084158-29|AAL27264.2|  666|Caenorhabditis elegans Yeast smf
           (divalent cation transporter)homolog protein 3 protein.
          Length = 666

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
 Frame = -1

Query: 486 VLFFDYDFL---LGII*SYNLLVVALTMLIFMFYIFRLRFL*VFCNFVTCLRFFSSVS*K 316
           +LF ++ FL   +G    YN + + +T+   +FYI  + +L  +C  +  + F S +  K
Sbjct: 573 ILFINFYFLYSWIGSTFGYNAVSIPITIFCAIFYIIFIAYLTYYC--LVAMEFISPIQTK 630

Query: 315 GL 310
            L
Sbjct: 631 WL 632


>Z54282-1|CAA91056.2| 1201|Caenorhabditis elegans Hypothetical protein
            F52E10.1 protein.
          Length = 1201

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 15/112 (13%)
 Frame = +1

Query: 88   HSDIIDFHEYYTNAKLHELYDLMRNY---------DLIDITLMTEVEEKRDNESCLIDET 240
            +S I+D+H Y+ N   +++ D + N+         DL +   + E+ +K ++     +  
Sbjct: 721  YSKILDYHTYFCNDTRYKVQDSINNWNDCSTIRDVDLSEKLSVAEIVQKGEDSVMAPEPD 780

Query: 241  IYEDDNVHWPS--IIE----LNKTEYNRIQAFLRDTAKKPEAGNKVTKDSEE 378
            I +  NV++PS  II     L  TE N      RD   K E   K  +  +E
Sbjct: 781  IIK--NVYFPSARIITDNMLLRMTEINLNDVVQRDPITKEELTGKFKEVQDE 830


>X58520-1|CAA41410.1| 1203|Caenorhabditis elegans zinc-finger protein
            protein.
          Length = 1203

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 15/112 (13%)
 Frame = +1

Query: 88   HSDIIDFHEYYTNAKLHELYDLMRNY---------DLIDITLMTEVEEKRDNESCLIDET 240
            +S I+D+H Y+ N   +++ D + N+         DL +   + E+ +K ++     +  
Sbjct: 723  YSKILDYHTYFCNDTRYKVQDSINNWNDCSTIRDVDLSEKLSVAEIVQKGEDSVMAPEPD 782

Query: 241  IYEDDNVHWPS--IIE----LNKTEYNRIQAFLRDTAKKPEAGNKVTKDSEE 378
            I +  NV++PS  II     L  TE N      RD   K E   K  +  +E
Sbjct: 783  IIK--NVYFPSARIITDNMLLRMTEINLNDVVQRDPITKEELTGKFKEVQDE 832


>U43375-5|AAA83622.1| 1035|Caenorhabditis elegans Hypothetical
           protein K09C4.10 protein.
          Length = 1035

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
 Frame = +1

Query: 190 TEVEEKRDNESCLIDETIYEDDNVHWPSIIELNKTEYNR-IQAFLRDTAKKPEAGNKVTK 366
           T++E+   N S  ID+T+   DNV  P+++    TE  +   ++ +   K  +   +  K
Sbjct: 420 TKIEQNISNGSSRIDDTVEATDNV--PTLVNTTPTEQTKPTLSYAKIVEKFSKTDQQPAK 477

Query: 367 -DSEEPQP 387
            D+  P P
Sbjct: 478 SDNSSPSP 485


>U00036-14|ABC71802.1|  672|Caenorhabditis elegans Hypothetical
           protein R151.7a protein.
          Length = 672

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -3

Query: 403 YVLHFQVEVPLSLL*LCYLPQ 341
           Y +HFQ + P+SL  + Y+PQ
Sbjct: 289 YTIHFQTDTPVSLRSVIYIPQ 309


>U00036-13|ABC71803.1|  479|Caenorhabditis elegans Hypothetical
           protein R151.7b protein.
          Length = 479

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -3

Query: 403 YVLHFQVEVPLSLL*LCYLPQ 341
           Y +HFQ + P+SL  + Y+PQ
Sbjct: 289 YTIHFQTDTPVSLRSVIYIPQ 309


>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
            protein Y32H12A.8 protein.
          Length = 3901

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 22/98 (22%), Positives = 37/98 (37%)
 Frame = +1

Query: 94   DIIDFHEYYTNAKLHELYDLMRNYDLIDITLMTEVEEKRDNESCLIDETIYEDDNVHWPS 273
            +IID   Y+T  ++ ++    RNY   DI L    ++K + +   + +   +  N  W  
Sbjct: 2004 EIIDESNYWTKKQMKQVLCRKRNY---DIRLGYTRQKKNNGDLFRVQDRSRKVVNREWQM 2060

Query: 274  IIELNKTEYNRIQAFLRDTAKKPEAGNKVTKDSEEPQP 387
             +E    E  R+          P      T D   P P
Sbjct: 2061 RLEKMVNETRRVDFSTSSFRVNPHEKLIYTSDEHHPWP 2098


>Z30317-5|CAA82971.4| 1890|Caenorhabditis elegans Hypothetical protein
            T16G12.1 protein.
          Length = 1890

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +1

Query: 145  YDLMRNYDLIDITLMTEVEEKRDNESCLIDETIY 246
            Y L  +Y +I +TL      + + +SC+ DET++
Sbjct: 1469 YTLQTSYPIITLTLRGTSTVQANQQSCMSDETLW 1502


>AC024843-12|AAF60833.3|  986|Caenorhabditis elegans Hypothetical
           protein Y61A9LA.10 protein.
          Length = 986

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 3/79 (3%)
 Frame = +1

Query: 193 EVEEKRDNESCLIDETIYEDDNVHWPSIIELNKTEYNRIQAFLRDTAKKPEAGNKVTKDS 372
           E +E  D +   +     E+D   W ++      +Y   Q    +  K    G KVTKD 
Sbjct: 354 EEDEDEDEDEEDVGVVKKEEDQNEWSNLASKAVAQYRESQNVKVNWMKLVYGGEKVTKDE 413

Query: 373 EEPQPEN---VEHKNQHCE 420
           +E   ++   V  +NQ  E
Sbjct: 414 KEETIDDLFVVRKQNQKSE 432


>Z83221-6|CAB05703.3|  210|Caenorhabditis elegans Hypothetical
           protein C49A1.10 protein.
          Length = 210

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -1

Query: 474 DYDFLLGII*SYNLLVVALTMLIFMFYIFRL 382
           D  FLLGI+     L+VAL  + F++ ++RL
Sbjct: 124 DSTFLLGIMIIVIYLLVALLEIFFLYIVYRL 154


>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
            interacting proteinprotein 1, isoform d protein.
          Length = 2350

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 20/68 (29%), Positives = 32/68 (47%)
 Frame = +1

Query: 187  MTEVEEKRDNESCLIDETIYEDDNVHWPSIIELNKTEYNRIQAFLRDTAKKPEAGNKVTK 366
            + ++E +R N S L D   ++ + +     IEL + E  R  A +R+TA + EA  K   
Sbjct: 2005 LAQLENERRNSSQLSDG--WKKEKITLLKKIELLENEKRRTDAAIRETALQREAIEKSLN 2062

Query: 367  DSEEPQPE 390
              E    E
Sbjct: 2063 AMERENKE 2070


>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
            interacting proteinprotein 1, isoform a protein.
          Length = 2396

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 20/68 (29%), Positives = 32/68 (47%)
 Frame = +1

Query: 187  MTEVEEKRDNESCLIDETIYEDDNVHWPSIIELNKTEYNRIQAFLRDTAKKPEAGNKVTK 366
            + ++E +R N S L D   ++ + +     IEL + E  R  A +R+TA + EA  K   
Sbjct: 2078 LAQLENERRNSSQLSDG--WKKEKITLLKKIELLENEKRRTDAAIRETALQREAIEKSLN 2135

Query: 367  DSEEPQPE 390
              E    E
Sbjct: 2136 AMERENKE 2143


>AC006604-1|AAF39751.1|  484|Caenorhabditis elegans Hypothetical
           protein C07F11.2 protein.
          Length = 484

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
 Frame = +1

Query: 103 DFHEYYTNAKLHELYDLMRNYDLIDITLMTEVEEKRDNESCLIDETIYEDDNVHWPSIIE 282
           DF ++  +A+L++L  L R  +     L +E+  K+D  +CL+ + ++     + P +  
Sbjct: 353 DFVDFLIDAELNDLPVLKRACERY---LCSELNSKKDIGTCLLLDLLFNSIVFNLPVMKS 409

Query: 283 LNKTEY-NRIQAFL-RDTAKKPEAGNKVTKDSEEPQPENVEHKNQHC 417
           +  TE  NR   F+  DT    E    + K        N+    + C
Sbjct: 410 MTLTELANRTHEFVDADTLLDQEEFKNLDKRMRTLADRNLVELIEQC 456


>Z95559-13|CAB09003.2|  682|Caenorhabditis elegans Hypothetical
           protein Y41E3.1a protein.
          Length = 682

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +1

Query: 145 YDLMRNYDLIDITLMTEVEEKRDNESCLIDETIY 246
           YD++R+   +D   M+ V +  D   C+ID+  Y
Sbjct: 638 YDIVRDEVKLDFGSMSHVNKFGDTPHCIIDKNYY 671


>Z48009-2|CAA88077.1|  230|Caenorhabditis elegans Hypothetical
           protein AH6.3 protein.
          Length = 230

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +1

Query: 331 AKKPEAGNKVTKDSEEPQPENVEHK 405
           +KKPE G+K +K SE+ + +  E K
Sbjct: 93  SKKPEKGSKKSKKSEKSKKKKTEEK 117


>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
            B0207.5 protein.
          Length = 3279

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
 Frame = +1

Query: 247  EDDNVHWPSIIELNKTEYNRIQAFL--RDTAKKPEAGNKVTKDSEEPQPENVEHKNQHCE 420
            +D++  +  + E     Y   + F+  R   +K       T   EEP    V  K    E
Sbjct: 2329 DDEDDEFVDVRENKPKSYIEFEGFVKVRGNPRKIRKRPSFTDSGEEPDIREVTRKIVEGE 2388

Query: 421  CNN*KIIRLYNTKKKIVI 474
             ++ K +RL + +KK+VI
Sbjct: 2389 EDDFKGVRLKSHRKKLVI 2406


>AC006661-10|AAF39887.1|  843|Caenorhabditis elegans Hypothetical
           protein H20J04.1 protein.
          Length = 843

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = +1

Query: 91  SDIIDFHEYYTNAKLHELYDLMRNYDLIDITLMTEVEEKRDNESCLIDETIYEDDN 258
           S  I F E  TNA  + L DL +        L+   + KRD     + ET+ ED++
Sbjct: 284 SHAIKFIEKLTNADKNTLNDLRKWTGAFPDELLKIEDLKRDINETFLKETLTEDNS 339


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,058,791
Number of Sequences: 27780
Number of extensions: 168995
Number of successful extensions: 572
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 571
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 967231538
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)