Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10p07
         (504 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    25   0.59 
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   1.4  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   5.5  
S76959-1|AAB33934.1|   85|Apis mellifera olfactory receptor prot...    21   7.3  

>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 24.6 bits (51), Expect = 0.59
 Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
 Frame = +1

Query: 103 DFHEYYTNAKLHEL-YDLMRNYDLIDITLMTEVEEKRDNESCLIDETIYEDDNVHWPSII 279
           + ++++ N K+  L +D         +T    +   ++ +S L+   +  DDN+H   +I
Sbjct: 362 EMNKWWWNMKISNLSFDKQSLLKENTVTCQEAMHMLKNADSQLL---VISDDNIHIKGVI 418

Query: 280 ELNK-TEY 300
            LNK T Y
Sbjct: 419 SLNKLTSY 426


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +1

Query: 364 KDSEEPQPENVEHKNQHCECNN*KIIRLYNTKKKIVIKEKNFXVXK 501
           +D  + + +N  H NQ  E  N   I   N+K+    KE+NF V +
Sbjct: 55  QDHNKEKSKNNHHCNQDTEKLNQLEIESDNSKEVNDKKEENFIVDR 100


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +1

Query: 163 YDLIDITLMTEVEEKRDNESCLIDETIYE 249
           Y++I   + T ++EKRD+      E I++
Sbjct: 279 YNIISEIIETTIQEKRDDAKDESVEAIFQ 307


>S76959-1|AAB33934.1|   85|Apis mellifera olfactory receptor
           protein.
          Length = 85

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -2

Query: 470 TIFFLVLYSLIIF*LLH 420
           ++  L+ Y+LI+F +LH
Sbjct: 23  SLIILISYALILFNILH 39


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,584
Number of Sequences: 438
Number of extensions: 2767
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13864083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)