Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10p07
(504 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g48280.1 68418.m05963 hypothetical protein 32 0.25
At5g26660.1 68418.m03174 myb family transcription factor (MYB4) ... 32 0.25
At1g67120.1 68414.m07636 midasin-related similar to Midasin (MID... 31 0.33
At1g23060.2 68414.m02882 expressed protein Location of EST gb|T2... 30 1.0
At1g23060.1 68414.m02883 expressed protein Location of EST gb|T2... 30 1.0
At5g03690.1 68418.m00328 fructose-bisphosphate aldolase, putativ... 29 2.4
At1g48590.1 68414.m05433 C2 domain-containing protein similar to... 29 2.4
At5g15580.1 68418.m01824 expressed protein unknown protein F14P3... 28 3.1
At1g13650.2 68414.m01605 expressed protein 28 3.1
At1g13650.1 68414.m01604 expressed protein 28 3.1
At1g03920.1 68414.m00377 protein kinase, putative contains prote... 28 4.1
At2g20470.1 68415.m02390 protein kinase, putative contains prote... 27 5.4
At4g25120.1 68417.m03614 UvrD/REP helicase family protein contai... 27 9.5
At2g27090.1 68415.m03255 expressed protein contains Pfam domains... 27 9.5
>At5g48280.1 68418.m05963 hypothetical protein
Length = 145
Score = 31.9 bits (69), Expect = 0.25
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +1
Query: 178 ITLMTEVEEKRDNESCLIDETIYEDDNVHWPSIIELNKTEYNRIQ 312
I ++ +K NE+ LID T EDDN+ +PS+IE+ R++
Sbjct: 12 INYSKDISKKVTNENALID-TAMEDDNI-YPSVIEIKNHPKIRVK 54
>At5g26660.1 68418.m03174 myb family transcription factor (MYB4)
(MYB86) contains Pfam profile: PF00249 myb-like
DNA-binding domain; identical to cDNA putative
transcription factor (MYB86) mRNA, partial cds
GI:3941517
Length = 352
Score = 31.9 bits (69), Expect = 0.25
Identities = 18/70 (25%), Positives = 32/70 (45%)
Frame = +1
Query: 190 TEVEEKRDNESCLIDETIYEDDNVHWPSIIELNKTEYNRIQAFLRDTAKKPEAGNKVTKD 369
TE + +N + L+D+ + D W S I L+ TE+N+ + + KP+ N +
Sbjct: 255 TEASQTMNNNNPLVDQHHHHQDMKSWASEI-LHYTEHNQSSETVIEAEVKPDIANYYWRS 313
Query: 370 SEEPQPENVE 399
+ N E
Sbjct: 314 ASSSSSPNQE 323
>At1g67120.1 68414.m07636 midasin-related similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q12019)
[Saccharomyces cerevisiae]; similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q9NU22) [Homo
sapiens]; contains Prosite PS00017: ATP/GTP-binding site
motif A (P-loop)
Length = 5336
Score = 31.5 bits (68), Expect = 0.33
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +1
Query: 250 DDNVHWPSIIELNKTEYNRIQAFLRDTAKKPEAGNKVTKDSEEPQPENVE 399
DD++ E+ K + N+ + + K PE G ++++EP EN+E
Sbjct: 4682 DDDMEMDKTEEVEKEDANQQEEPCSEDQKHPEEGENDQEETQEPSEENME 4731
>At1g23060.2 68414.m02882 expressed protein Location of EST
gb|T22158 and gb|AA395675
Length = 306
Score = 29.9 bits (64), Expect = 1.0
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +1
Query: 217 ESCL-IDETIY--EDDNVHWPSIIELNKTEYNRIQAFLRDTAKKPEAGNKVTKDSEEPQP 387
+SC+ DETI DD+VH + L +T+ RI+ + +K K+ ++ +P
Sbjct: 50 DSCVSFDETILVNSDDDVHTSISVALERTDIGRIEDEKETKSSSSATRSKPLKNVQKARP 109
Query: 388 ENVEHKN 408
+ +K+
Sbjct: 110 YSATNKD 116
>At1g23060.1 68414.m02883 expressed protein Location of EST
gb|T22158 and gb|AA395675
Length = 367
Score = 29.9 bits (64), Expect = 1.0
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +1
Query: 217 ESCL-IDETIY--EDDNVHWPSIIELNKTEYNRIQAFLRDTAKKPEAGNKVTKDSEEPQP 387
+SC+ DETI DD+VH + L +T+ RI+ + +K K+ ++ +P
Sbjct: 111 DSCVSFDETILVNSDDDVHTSISVALERTDIGRIEDEKETKSSSSATRSKPLKNVQKARP 170
Query: 388 ENVEHKN 408
+ +K+
Sbjct: 171 YSATNKD 177
>At5g03690.1 68418.m00328 fructose-bisphosphate aldolase, putative
similar to PIR|S65073 fructose-bisphosphate aldolase (EC
4.1.2.13) isoenzyme C-1, cytosolic [Oryza sativa];
contains Pfam profile PF00274 Fructose-bisphosphate
aldolase class-I
Length = 393
Score = 28.7 bits (61), Expect = 2.4
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 88 HSDIIDFHEYYTNAKLHELYDLMRNYDLI 174
HS II FH + H Y ++R Y+LI
Sbjct: 19 HSSIIQFHPQLSILIWHRRYSIIRTYELI 47
>At1g48590.1 68414.m05433 C2 domain-containing protein similar to
zinc finger and C2 domain protein GI:9957238 from
[Arabidopsis thaliana]
Length = 169
Score = 28.7 bits (61), Expect = 2.4
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +1
Query: 154 MRNYDLIDITLMTEVEEKRDNESCLIDET--IYEDDNVHWPSIIELNKTEYNRIQAFLR 324
M +DL T++T V+ RDN CL +E+ I+ D + ++ L E ++A L+
Sbjct: 104 MHLHDLPSGTIVTTVQPSRDN--CLAEESRVIWSDGKLVQDIVLRLRHVECGEVEAQLQ 160
>At5g15580.1 68418.m01824 expressed protein unknown protein F14P3.18
- Arabidopsis thaliana, EMBL:AC009755
Length = 927
Score = 28.3 bits (60), Expect = 3.1
Identities = 10/32 (31%), Positives = 21/32 (65%)
Frame = +1
Query: 181 TLMTEVEEKRDNESCLIDETIYEDDNVHWPSI 276
TL +E++ +DN C++DE +D+++ W +
Sbjct: 844 TLCSEIDRLQDNSKCILDE---DDEDLIWEDL 872
>At1g13650.2 68414.m01605 expressed protein
Length = 286
Score = 28.3 bits (60), Expect = 3.1
Identities = 18/76 (23%), Positives = 32/76 (42%)
Frame = +1
Query: 193 EVEEKRDNESCLIDETIYEDDNVHWPSIIELNKTEYNRIQAFLRDTAKKPEAGNKVTKDS 372
E+EE D E+ ++ DD+ P + T ++ L D ++ + K++
Sbjct: 26 EIEEL-DQENLVVTRQEVNDDSKVAPRDVVATSTSVSKKALTLGDILSLEDSQSPPNKNN 84
Query: 373 EEPQPENVEHKNQHCE 420
EN+ H N H E
Sbjct: 85 TNGPEENMVHHNPHLE 100
>At1g13650.1 68414.m01604 expressed protein
Length = 281
Score = 28.3 bits (60), Expect = 3.1
Identities = 18/76 (23%), Positives = 32/76 (42%)
Frame = +1
Query: 193 EVEEKRDNESCLIDETIYEDDNVHWPSIIELNKTEYNRIQAFLRDTAKKPEAGNKVTKDS 372
E+EE D E+ ++ DD+ P + T ++ L D ++ + K++
Sbjct: 21 EIEEL-DQENLVVTRQEVNDDSKVAPRDVVATSTSVSKKALTLGDILSLEDSQSPPNKNN 79
Query: 373 EEPQPENVEHKNQHCE 420
EN+ H N H E
Sbjct: 80 TNGPEENMVHHNPHLE 95
>At1g03920.1 68414.m00377 protein kinase, putative contains protein
kinase domain, Pfam:PF00069
Length = 569
Score = 27.9 bits (59), Expect = 4.1
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +1
Query: 121 TNAKLHELYDLMRNYDLIDITLMTEVEEKRDN-ESCLIDETIYEDDNVHWPSIIELNKTE 297
T K+ + N+ + + E +E+R E L D + E+D + +E +TE
Sbjct: 64 TKQKVAAAKQYIENHYKEQMKNLNERKERRTTLEKKLADADVCEEDQTNLMKFLEKKETE 123
Query: 298 YNRIQ 312
Y R+Q
Sbjct: 124 YMRLQ 128
>At2g20470.1 68415.m02390 protein kinase, putative contains protein
kinase domain, Pfam:PF00069
Length = 596
Score = 27.5 bits (58), Expect = 5.4
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +1
Query: 121 TNAKLHELYDLMRNYDLIDITLMTEVEEKRDN-ESCLIDETIYEDDNVHWPSIIELNKTE 297
T K+ + N+ + ++ E +E+R E L D + E+D + +E +TE
Sbjct: 51 TKQKVAAAKQYIENHYKEQMKILQERKERRSMLEQKLADADVSEEDQNNLLKFLEKKETE 110
Query: 298 YNRIQ 312
Y R+Q
Sbjct: 111 YMRLQ 115
>At4g25120.1 68417.m03614 UvrD/REP helicase family protein contains
Pfam PF00580: UvrD/REP helicase
Length = 1122
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/55 (23%), Positives = 25/55 (45%)
Frame = +1
Query: 205 KRDNESCLIDETIYEDDNVHWPSIIELNKTEYNRIQAFLRDTAKKPEAGNKVTKD 369
+RDNE+ + TI++ + W I+ + K N I E+G + ++
Sbjct: 810 RRDNENSVTLTTIHQSKGLEW-DIVFIVKANENEIPLLHESNGNASESGTSLEEE 863
>At2g27090.1 68415.m03255 expressed protein contains Pfam domains,
PF04782: Protein of unknown function (DUF632) and
PF04783: Protein of unknown function (DUF630)
Length = 743
Score = 26.6 bits (56), Expect = 9.5
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +1
Query: 121 TNAKLHELYDLMR-NYDLIDITLMTEVEEKRDNESCLIDETIYEDDNVHWPSIIELNKTE 297
T A + +L+ +R ID ++ +EE RDNE E + E + W ++E +K +
Sbjct: 477 TRAVVKDLHSRIRVAIHRID-SISRRIEELRDNELQPQLEELIEGLSRMWEVMLECHKVQ 535
Query: 298 YNRIQAFLR 324
+ I+A R
Sbjct: 536 FQLIKACYR 544
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,120,943
Number of Sequences: 28952
Number of extensions: 142590
Number of successful extensions: 499
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 498
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 898188928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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