Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10p06
         (427 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC090999-5|AAK26144.1|   98|Caenorhabditis elegans Hypothetical ...    29   1.8  
AF101318-2|AAK68599.1|  331|Caenorhabditis elegans Seven tm rece...    27   5.6  
AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical...    27   7.4  
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical...    27   7.4  

>AC090999-5|AAK26144.1|   98|Caenorhabditis elegans Hypothetical
           protein Y82E9BR.10 protein.
          Length = 98

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 18/45 (40%), Positives = 21/45 (46%)
 Frame = -2

Query: 153 SSNGAILTGTTSASRK*LIPTNMRMQMSQKYTLKEPILCSFSMLN 19
           S    I+  T SAS K L+    R Q     +L  PI C FS LN
Sbjct: 29  SLQNRIVEQTLSASAKTLLIFKKRTQFLNSLSLPLPIWCLFSCLN 73


>AF101318-2|AAK68599.1|  331|Caenorhabditis elegans Seven tm
           receptor protein 66 protein.
          Length = 331

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = +2

Query: 20  FNIENEHKMGSLRVYFCDICILMLVGINYFLLAEVVPVSIAPF 148
           F+++N++     R YF  + I  LV    FL+   VP+ IAPF
Sbjct: 231 FSVQNQNLQ---RQYFIALVIQALVP-TMFLITPAVPILIAPF 269


>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
           protein Y57A10A.18b protein.
          Length = 1459

 Score = 26.6 bits (56), Expect = 7.4
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
 Frame = +2

Query: 239 LVVKCDQEGDNTCKILCNALXTA----TKAKGPEILCSRLKDVNELKLS 373
           L+V  D E   T   + N L +A    T ++     C RLKD+ E KLS
Sbjct: 701 LIVSLDHEFRETVSCVNNCLESARTALTNSQRTVTECDRLKDIFEEKLS 749


>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
           protein Y57A10A.18a protein.
          Length = 1456

 Score = 26.6 bits (56), Expect = 7.4
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
 Frame = +2

Query: 239 LVVKCDQEGDNTCKILCNALXTA----TKAKGPEILCSRLKDVNELKLS 373
           L+V  D E   T   + N L +A    T ++     C RLKD+ E KLS
Sbjct: 701 LIVSLDHEFRETVSCVNNCLESARTALTNSQRTVTECDRLKDIFEEKLS 749


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,677,044
Number of Sequences: 27780
Number of extensions: 195578
Number of successful extensions: 569
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 569
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 703342068
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)