Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10p04
         (714 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9YW03 Cluster: ORF MSV089 Putative NTPase, Rabbit fibr...    33   5.3  
UniRef50_A5E5H1 Cluster: Putative uncharacterized protein; n=1; ...    33   7.0  
UniRef50_Q8I3M7 Cluster: Transporter, putative; n=1; Plasmodium ...    33   9.2  
UniRef50_Q89A97 Cluster: Multidrug resistance-like ATP-binding p...    33   9.2  

>UniRef50_Q9YW03 Cluster: ORF MSV089 Putative NTPase, Rabbit fibroma
           virus C5 (Vaccinia D5R) homolog, similar to PIR:G41700;
           n=1; Melanoplus sanguinipes entomopoxvirus|Rep: ORF
           MSV089 Putative NTPase, Rabbit fibroma virus C5
           (Vaccinia D5R) homolog, similar to PIR:G41700 -
           Melanoplus sanguinipes entomopoxvirus (MsEPV)
          Length = 834

 Score = 33.5 bits (73), Expect = 5.3
 Identities = 15/68 (22%), Positives = 34/68 (50%)
 Frame = -3

Query: 319 VIVTMILSYLRLHFH*MQRTRLQNYSFAIVTQLDTYRSNYLILCIYLKTNKANSFYTNTQ 140
           ++   + + L++H H  ++         I  Q+  +++N L+ CIY K + +  ++T   
Sbjct: 150 LVSNSVFTTLKIHIHNYKKRTTNELILGIDEQV--FKNNTLLRCIYSKKSNSKYYHTEYD 207

Query: 139 HRCASIND 116
            +  S+ND
Sbjct: 208 DQIESVND 215


>UniRef50_A5E5H1 Cluster: Putative uncharacterized protein; n=1;
           Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
           uncharacterized protein - Lodderomyces elongisporus
           (Yeast) (Saccharomyces elongisporus)
          Length = 1138

 Score = 33.1 bits (72), Expect = 7.0
 Identities = 14/29 (48%), Positives = 21/29 (72%)
 Frame = -3

Query: 412 IPILLGCNRLVQ*QTRRGVHTKQRKNSNV 326
           +P+ +    +VQ  T+RG +T+QRKNSNV
Sbjct: 305 VPLTMELTEVVQRPTKRGNNTEQRKNSNV 333


>UniRef50_Q8I3M7 Cluster: Transporter, putative; n=1; Plasmodium
           falciparum 3D7|Rep: Transporter, putative - Plasmodium
           falciparum (isolate 3D7)
          Length = 684

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 20/60 (33%), Positives = 33/60 (55%)
 Frame = -1

Query: 522 LVFLSIYLTNLLHMYCTSVKTETNLILI*VFKRICIIFLYY*GVIDWCNSKRGEGYIQNN 343
           L+ ++I ++N+L  +   V  ET+LI I  F  +   FLY+  +I + N    + YIQ N
Sbjct: 627 LIIIAIIISNVLLTFLDFVHKETSLITI--FFLVIFSFLYFGFIIYFFNIPIKKNYIQRN 684


>UniRef50_Q89A97 Cluster: Multidrug resistance-like ATP-binding
           protein mdlA; n=2; Buchnera aphidicola|Rep: Multidrug
           resistance-like ATP-binding protein mdlA - Buchnera
           aphidicola subsp. Baizongia pistaciae
          Length = 579

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +3

Query: 564 IRYFYYHRVTDVLSHNIIFKLRPGQILHLFRSNG 665
           I YF Y +    +  NI FK+RPGQIL +    G
Sbjct: 340 INYFKYSKSNKTILKNINFKIRPGQILGICGPTG 373


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 624,224,359
Number of Sequences: 1657284
Number of extensions: 11657945
Number of successful extensions: 21931
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21927
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57438021881
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)