Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10p04
         (714 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     23   2.5  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    23   2.5  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           23   2.5  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    23   2.5  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   3.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.3  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   7.5  
AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    21   9.9  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   9.9  

>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
 Frame = -3

Query: 541 FIVNSNARIPKYLPNQFVTYVLHKC*DRNEFDFNLSIQKDMYHIP--ILLGCNRLVQ*QT 368
           F++N    +P Y   Q ++ V+       +F  +    ++ Y  P     G + + Q Q 
Sbjct: 5   FLMNPGTALPTYQQPQHISGVVVD----PKFPPSEEYNQNSYIPPGGDFFGNHHIQQQQL 60

Query: 367 RRGVHTKQRKNSNVI 323
           + G H  Q  NSNV+
Sbjct: 61  QYGYHNHQNYNSNVL 75


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
 Frame = -3

Query: 541 FIVNSNARIPKYLPNQFVTYVLHKC*DRNEFDFNLSIQKDMYHIP--ILLGCNRLVQ*QT 368
           F++N    +P Y   Q ++ V+       +F  +    ++ Y  P     G + + Q Q 
Sbjct: 5   FLMNPGTALPTYQQPQHISGVVVD----PKFPPSEEYNQNSYIPPGGDFFGNHHIQQQQL 60

Query: 367 RRGVHTKQRKNSNVI 323
           + G H  Q  NSNV+
Sbjct: 61  QYGYHNHQNYNSNVL 75


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
 Frame = -3

Query: 541 FIVNSNARIPKYLPNQFVTYVLHKC*DRNEFDFNLSIQKDMYHIP--ILLGCNRLVQ*QT 368
           F++N    +P Y   Q ++ V+       +F  +    ++ Y  P     G + + Q Q 
Sbjct: 5   FLMNPGTALPTYQQPQHISGVVVD----PKFPPSEEYNQNSYIPPGGDFFGNHHIQQQQL 60

Query: 367 RRGVHTKQRKNSNVI 323
           + G H  Q  NSNV+
Sbjct: 61  QYGYHNHQNYNSNVL 75


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
 Frame = -3

Query: 541 FIVNSNARIPKYLPNQFVTYVLHKC*DRNEFDFNLSIQKDMYHIP--ILLGCNRLVQ*QT 368
           F++N    +P Y   Q ++ V+       +F  +    ++ Y  P     G + + Q Q 
Sbjct: 5   FLMNPGTALPTYQQPQHISGVVVD----PKFPPSEEYNQNSYIPPGGDFFGNHHIQQQQL 60

Query: 367 RRGVHTKQRKNSNVI 323
           + G H  Q  NSNV+
Sbjct: 61  QYGYHNHQNYNSNVL 75


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/25 (32%), Positives = 18/25 (72%)
 Frame = -3

Query: 547 LIFIVNSNARIPKYLPNQFVTYVLH 473
           ++ IVN+ ++IP  + +++ TY L+
Sbjct: 328 ILSIVNTCSQIPSEVEDKYTTYFLN 352


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/42 (23%), Positives = 19/42 (45%)
 Frame = -1

Query: 525 TLVFLSIYLTNLLHMYCTSVKTETNLILI*VFKRICIIFLYY 400
           +LVF    L  + + YC S+    +L+ +       +  L+Y
Sbjct: 45  SLVFKCYNLRRIYYFYCVSITFNVHLLFLLCSGYFTVHLLFY 86


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 58  SKVHNLGNNAPNTSL 14
           S +HN G+N P+T L
Sbjct: 233 SHIHNDGDNKPDTIL 247


>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +3

Query: 558 YFIRYFYYHRVTDVLSHNII 617
           Y I  F   R TDV +HN +
Sbjct: 116 YEITRFIRSRETDVYTHNFV 135


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 317 YCYNDTLILTTTF 279
           YC+N  +I+ TTF
Sbjct: 76  YCFNYYVIVVTTF 88


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,123
Number of Sequences: 336
Number of extensions: 3486
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)