BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10p02
(699 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF183427-1|AAG09696.1| 481|Homo sapiens HT005 protein protein. 43 0.001
CR456785-1|CAG33066.1| 493|Homo sapiens ARIH2 protein. 41 0.004
BC000422-1|AAH00422.1| 493|Homo sapiens ariadne homolog 2 (Dros... 41 0.004
AK223550-1|BAD97270.1| 493|Homo sapiens ariadne homolog 2 varia... 41 0.004
AJ130978-1|CAA10276.1| 493|Homo sapiens Ariadne-2 protein (ARI2... 41 0.004
AF099149-1|AAC82469.1| 493|Homo sapiens TRIAD1 type I protein. 41 0.004
>AF183427-1|AAG09696.1| 481|Homo sapiens HT005 protein protein.
Length = 481
Score = 42.7 bits (96), Expect = 0.001
Identities = 20/69 (28%), Positives = 35/69 (50%)
Frame = +1
Query: 406 DPEYFVFSCXXXXXXXXXXXXXXXXXXXXXQITPSLAKVALHAYEWNAQEIINKYKENAN 585
DPE + F+C Q++ S+AK+ L + W EI+++YK N+
Sbjct: 42 DPEEYQFTCLTYKESEGALNEHMTSLASVLQVSHSVAKLILVNFHWQVSEILDRYKSNSA 101
Query: 586 EVLVFSRVK 612
++LV +RV+
Sbjct: 102 QLLVEARVQ 110
>CR456785-1|CAG33066.1| 493|Homo sapiens ARIH2 protein.
Length = 493
Score = 41.1 bits (92), Expect = 0.004
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = +1
Query: 406 DPEYFVFSCXXXXXXXXXXXXXXXXXXXXXQITPSLAKVALHAYEWNAQEIINKYKENAN 585
DPE + F+C +++ S+AK+ L + W EI+++YK N+
Sbjct: 55 DPEEYQFTCLTYKESEGALNEHMTSLASVLKVSHSVAKLILVNFHWQVSEILDRYKSNSA 114
Query: 586 EVLVFSRVK 612
++LV +RV+
Sbjct: 115 QLLVEARVQ 123
>BC000422-1|AAH00422.1| 493|Homo sapiens ariadne homolog 2
(Drosophila) protein.
Length = 493
Score = 41.1 bits (92), Expect = 0.004
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = +1
Query: 406 DPEYFVFSCXXXXXXXXXXXXXXXXXXXXXQITPSLAKVALHAYEWNAQEIINKYKENAN 585
DPE + F+C +++ S+AK+ L + W EI+++YK N+
Sbjct: 55 DPEEYQFTCLTYKESEGALNEHMTSLASVLKVSHSVAKLILVNFHWQVSEILDRYKSNSA 114
Query: 586 EVLVFSRVK 612
++LV +RV+
Sbjct: 115 QLLVEARVQ 123
>AK223550-1|BAD97270.1| 493|Homo sapiens ariadne homolog 2 variant
protein.
Length = 493
Score = 41.1 bits (92), Expect = 0.004
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = +1
Query: 406 DPEYFVFSCXXXXXXXXXXXXXXXXXXXXXQITPSLAKVALHAYEWNAQEIINKYKENAN 585
DPE + F+C +++ S+AK+ L + W EI+++YK N+
Sbjct: 55 DPEEYQFTCLTYKESEGALNEHITSLASVLKVSHSVAKLILVNFHWQVSEILDRYKSNSA 114
Query: 586 EVLVFSRVK 612
++LV +RV+
Sbjct: 115 QLLVEARVQ 123
>AJ130978-1|CAA10276.1| 493|Homo sapiens Ariadne-2 protein (ARI2)
protein.
Length = 493
Score = 41.1 bits (92), Expect = 0.004
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = +1
Query: 406 DPEYFVFSCXXXXXXXXXXXXXXXXXXXXXQITPSLAKVALHAYEWNAQEIINKYKENAN 585
DPE + F+C +++ S+AK+ L + W EI+++YK N+
Sbjct: 55 DPEEYQFTCLTYKESEGALNEHMTSLASVLKVSHSVAKLILVNFHWQVSEILDRYKSNSA 114
Query: 586 EVLVFSRVK 612
++LV +RV+
Sbjct: 115 QLLVEARVQ 123
>AF099149-1|AAC82469.1| 493|Homo sapiens TRIAD1 type I protein.
Length = 493
Score = 41.1 bits (92), Expect = 0.004
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = +1
Query: 406 DPEYFVFSCXXXXXXXXXXXXXXXXXXXXXQITPSLAKVALHAYEWNAQEIINKYKENAN 585
DPE + F+C +++ S+AK+ L + W EI+++YK N+
Sbjct: 55 DPEEYQFTCLTYKESEGALNEHMTSLASVLKVSHSVAKLILVNFHWQVSEILDRYKSNSA 114
Query: 586 EVLVFSRVK 612
++LV +RV+
Sbjct: 115 QLLVEARVQ 123
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,547,450
Number of Sequences: 237096
Number of extensions: 1385988
Number of successful extensions: 5091
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5090
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -